G78813


Basic Information

Item Value
gene id G78813
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36446647 ~ 36507814 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105419
tgtctgactgtgtgtgtgtgtctgtctgactgtgtctgtctgactgcgtgtctgtgtgtgtgtgtgtgtgtgtgtctgtctgactgtgtgtgtcggtctgtctgactgcgtgtctgtgtgtgtgtgtctgtctgtgtgtgtgtgtctgtctgtctgtctgtctgtgtgtgtgtgtgtctgtctgtgtgtgtgtttgtgtgtctgtctctgtgaatgtctgtgtattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtcaatcatctgtttgttgttattattatgcaATAAACCAGTTCATGCAGTTACACACTCTGCCAGTTGGGGAGCTGTTGACCagcggtgttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
>TU105421
gtctgtctgtctgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtctgtctgtctgtgtgtgtgtctgtgtgtgtgtgtgtctgtctgtctgtctgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtctgtgtcggtctctgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtctgtttctgtgtgtgtgtgtgtgtgtgt
>TU105422
ctgtgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtctgtttgtcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctctgtctgtttgtctgcgtgtgtgtgtgtcggtgtgtgtgtgtgtgtctgtctgtctgtgtgtgtctgtttctgtgtgtgtgtgtgtgtgtctgtgtctgtgtctgtctgtgtgtgtgtctctgtctgtctgtctgtctgtctgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtctgtctgtctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctttctgtgtcggtctgtgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtctgtgtgtgtgtgtctgtctgtgtgtgtgtttgtgtgtctgtctctgtgaatgtctgtgtattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtcaatcatctgtttgttgttattattatgcaATAAACCAGTTCATGCAGTTACACACTCTGCCAGTTGGGGAGCTGTTGACCagcggtgttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105419 False 475 lncRNA 0.48 3 36469256 36507814
TU105421 False 210 lncRNA 0.50 3 36446647 36447215
TU105422 True 803 lncRNA 0.49 3 36446709 36507814

Neighbor

gene id symbol gene type direction distance location
LOC120563182 NA coding upstream 63551 36368694 ~ 36383096 (+)
nat16l NA coding upstream 79622 36360700 ~ 36367025 (+)
LOC120563177 NA coding upstream 256232 36178207 ~ 36190415 (+)
LOC120563175 NA coding upstream 317405 36111050 ~ 36129242 (+)
dek LOC102312342,LOC102210945 coding upstream 336515 36092199 ~ 36110132 (+)
LOC120563185 NA coding downstream 20667 36528481 ~ 36541530 (+)
atp2c1 LOC103369286 coding downstream 252696 36760510 ~ 36792668 (+)
LOC120563178 NA coding downstream 301746 36809560 ~ 36829422 (+)
aldh5a1 aldh5a1 coding downstream 347605 36855419 ~ 36869334 (+)
pik3r4 pik3r4 coding downstream 387575 36895389 ~ 36924827 (+)
G78798 NA non-coding upstream 30763 36398049 ~ 36415884 (+)
G78770 NA non-coding upstream 107093 36335117 ~ 36339554 (+)
G78776 NA non-coding upstream 157493 36288792 ~ 36289154 (+)
LOC120563188 NA non-coding upstream 274483 36161780 ~ 36172164 (+)
G78756 NA non-coding upstream 358551 36087873 ~ 36088096 (+)
G78836 NA non-coding downstream 26979 36534793 ~ 36642606 (+)
G78837 NA non-coding downstream 71018 36578832 ~ 36643491 (+)
G78843 NA non-coding downstream 74129 36581943 ~ 36600679 (+)
G78844 NA non-coding downstream 74378 36582192 ~ 36601220 (+)
G78850 NA non-coding downstream 97857 36605671 ~ 36606317 (+)
G78772 NA other upstream 95652 36258160 ~ 36350995 (+)
G78759 NA other upstream 255808 36110851 ~ 36190839 (+)
LOC120562279 NA other upstream 558475 35865842 ~ 35888172 (+)
LOC120562275 NA other upstream 672659 35743295 ~ 35773988 (+)
G78594 NA other upstream 1037965 35405375 ~ 35408682 (+)
LOC120562456 dennd4b other downstream 73151 36580965 ~ 36670029 (+)
LOC120562457 NA other downstream 178122 36685936 ~ 36703993 (+)
G78888 NA other downstream 331408 36839222 ~ 36939954 (+)
G78989 NA other downstream 923357 37431171 ~ 37432679 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 1022876 37530690 ~ 37550602 (+)

Expression


Co-expression Network