LOC120562457


Basic Information

Item Value
gene id LOC120562457
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36685936 ~ 36703993 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105437
GAttacgttgtgtgtgtgtgtgtgtgtctcttcagcagcagcagcagcagcagcagcaggcgaACTCACAGCAGATAAAGAACGAGCGGCTGATGGATCAGTGCGTCCAGAGCTCCTCTCAGCATCACGTCAAACAGGAAGCGGAGCAGCAGACGGAGCAGCAGCGAGTCACAGACCTCTACAACGACGCCTTGTTCAACTCTCTGCTGGACGACCCCTACCTGAGCCTGCAGCTCACGGGCAAATCCACCCAGCAGGTAACCGAGAGCACCGTGTCATCGTAAACTGTGAATAACCGGCGGCTGAAGGGAGCGCGATGATGTCACccgatgatgtcatcactgtAAAGCCAGGAGGTTGTGTTTACAGTACGAGGGACGAAAATATCTGTTCCATCGTCTCGAcactgccagaccttcctccacagcgctgcggaggagggtctggctagtccacactgcattcctggatgggagaaaaacgtgctctctgtgtgtgtgtgtgtgtgggtgtgtgagtgtgtgtgtgtgggtgtgtgagtgtgtgtgtgtgtgtgcgtgtgcgcgcttgtttaactatattcatgaggtccaaaaaccgggagtccagtatacttgtggggtccggacagctttgtggggccaaaatgccgaaccccacaagtttaaagggctgtttgagggttagacatttagttgtgatggttaaggtaagggttaaggttagacatttagtggtgatggttaaggttagggtaagggttaaggttagacatttagtggtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggtgagggtaaaggttaaggttaggcatttagttgtgatggttaaggttagggtaaggggctagggaatgcattatgtcaatgatgggtccccacaaagatagtgaaacgcactttttcatgtttttttgtctgtcttttaTTTCCTGAAAAAGCAGCTGTGTATAATTCATGTGCATGAGTTTGAATAATGTCCTCTTGTGCTCCAGTTCAGCGCCGAGCACCAGGGCGACTGTCTGTCTCTGAACCACGGCGCTCTGAGCTGCGGCGGCTCCGATAACAACCAGTACCCCTCCGACAGCGGGGGCCACCTGGACCTGCAGGACCCCAGGGACCAGCAGCTCctcaaccaccagaaccagaACTACGGCGGCGGGGACGCACGGCACAACGTGCCCAACATCATCCTCACGGGGGACTCCCCTCCGGGTCTGTCTAAAGAGATCGCCAGCGCTCTGTCCCACGTGCCCGGCTTCGAGATGGACCCTTTCTCCCTGGACGACCCGCTGCGCATGGACCCGCTGGCTCTGGACATGCTGGACGGTGACCTGATGCTGGCTGACCCGGCTGTGGAGGACTCTTTCCGATCCGACCGGCTGAAGTGAccacctcccctccc
>XM_039806171.1
ATGGGAGCGGAGACGGAAAGGCATCACTCCAAACAGTTCTCCCCCACCATCTCCCCCACGCTGTCCTCCATCACACAGCAAACTGCCTCTGACAACCAGAGGCTTCCTCCACACTCCACTCAGCCAGTCGCACTCAGCACTCAGGCACCAACCAGGTTCCCACCAGCTCTCCCCCCGGCCCGCAGGGCTCCCAGCCTGGACAGCAACCCTCTCTTCTTCTCATATGCCCccaccacacccccacccccccccccgcccgcCCAGCACACACGGCAAAGGCAACAAAGCAACCAAACACCCAACCCAcatgcagcaacagcaacagtcACAGtccatgcagcagcagcagcagcagcagcagctccacctGCAGAACCTACGCAACTCACACAACCAGCAACGCAGCAGCAGCAATTTGAATCGcagcagcagcagcagcagcagcaggcgaACTCACAGCAGATAAAGAACGAGCGGCTGATGGATCAGTGCGTCCAGAGCTCCTCTCAGCATCACGTCAAACAGGAAGCGGAGCAGCAGACGGAGCAGCAGCGAGTCACAGACCTCTACAACGACGCCTTGTTCAACTCTCTGCTGGACGACCCCTACCTGAGCCTGCAGCTCACGGGCAAATCCACCCAGCAGTTCAGCGCCGAGCACCAGGGCGACTGTCTGTCTCTGAACCACGGCGCTCTGAGCTGCGGCGGCTCCGATAACAACCAGTACCCCTCCGACAGCGGGGGCCACCTGGACCTGCAGGACCCCAGGGACCAGCAGCTCctcaaccaccagaaccagaACTACGGCGGCGGGGACGCACGGCACAACGTGCCCAACATCATCCTCACGGGGGACTCCCCTCCGGGTCTGTCTAAAGAGATCGCCAGCGCTCTGTCCCACGTGCCCGGCTTCGAGATGGACCCTTTCTCCCTGGACGACCCGCTGCGCATGGACCCGCTGGCTCTGGACATGCTGGACGGTGACCTGATGCTGGCTGACCCGGCTGTGGAGGACTCTTTCCGATCCGACCGGCTGAAGTGAccacctcccctccctccctccctcccgtccctccctccctcctctcccctccaccCTGCACTGCCGGCTCAGCTCGGTGGGGATCAGCCAAGGAGACGGACGCCCTTCAGCGCCACTTCACCGCACACTCACCActcccacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105437 True 1455 TUCP 0.54 3 36691393 36703865
XM_039806171.1 False 1183 mRNA 0.63 6 36685936 36703993

Neighbor

gene id symbol gene type direction distance location
LOC120563185 NA coding upstream 144406 36528481 ~ 36541530 (+)
LOC120563182 NA coding upstream 302840 36368694 ~ 36383096 (+)
nat16l NA coding upstream 318911 36360700 ~ 36367025 (+)
LOC120563177 NA coding upstream 495521 36178207 ~ 36190415 (+)
LOC120563175 NA coding upstream 556694 36111050 ~ 36129242 (+)
atp2c1 LOC103369286 coding downstream 56517 36760510 ~ 36792668 (+)
LOC120563178 NA coding downstream 105567 36809560 ~ 36829422 (+)
aldh5a1 aldh5a1 coding downstream 151426 36855419 ~ 36869334 (+)
pik3r4 pik3r4 coding downstream 191396 36895389 ~ 36924827 (+)
LOC120562694 NA coding downstream 620908 37324901 ~ 37326438 (+)
G78863 NA non-coding upstream 18573 36666597 ~ 36667363 (+)
G78862 NA non-coding upstream 27630 36658008 ~ 36658306 (+)
G78837 NA non-coding upstream 42445 36578832 ~ 36643491 (+)
G78836 NA non-coding upstream 43330 36534793 ~ 36642606 (+)
G78850 NA non-coding upstream 79619 36605671 ~ 36606317 (+)
G78870 NA non-coding downstream 48098 36752091 ~ 36794092 (+)
G78871 NA non-coding downstream 49122 36753115 ~ 36907622 (+)
G78882 NA non-coding downstream 108722 36812715 ~ 36815976 (+)
G78907 NA non-coding downstream 209775 36913768 ~ 36980636 (+)
G78889 NA non-coding downstream 299590 37003583 ~ 37048033 (+)
LOC120562456 dennd4b other upstream 15907 36580965 ~ 36670029 (+)
LOC120563181 LOC107378893,LOC103370072 other upstream 220706 36392252 ~ 36465230 (+)
G78772 NA other upstream 334941 36258160 ~ 36350995 (+)
G78759 NA other upstream 495097 36110851 ~ 36190839 (+)
LOC120562279 NA other upstream 797764 35865842 ~ 35888172 (+)
G78888 NA other downstream 135229 36839222 ~ 36939954 (+)
G78989 NA other downstream 727178 37431171 ~ 37432679 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 826697 37530690 ~ 37550602 (+)
cmtm7 cmtm7 other downstream 1174923 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 1352423 38056416 ~ 38145804 (+)

Expression


Co-expression Network