G78822


Basic Information

Item Value
gene id G78822
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36500648 ~ 36706609 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105438
AATGAGACACAATGAGACACAATGAGACACAATGAGACACAATGAGACCCAATGAGACCCAATGAGACACAATGAGACACAATGAGACACAATGAGACACAATGAGACACAATGAGACCCAATGAGACCCAATGAGACACAATGAGACCTAATGAGACACAATGAGACCTAATGAGACccaatgagacataatgagaccTAATGAGACACAATGAGACTTAATGAGACATCACGACAGCGGTAACagacaattccacttccaacctgtagggggaccgaagagggaaaagttctctagcgTTGCTTTAGTTAAAGGTGcgctatgagttcctgcatgacgtcacttctgttgacgttccaagtaaatgccaaacacaaacagagcaagctcgccccatgtttccgtaacgGTCATGActgacccccccaccccctctccatctcccccaaccatcttgtctgtgattggctggaacgtggcTTGTTGTATTTCGGTGCACAGCCTGCGCCCCCTGgcgtttgtttgacgtttacgacccctgtgtcgTCTCTCTCGAGACCGGACTtttttcacggtgtgttcagggaacCAGGCAACTAGCGGATCACAGAGAGACGCCTACGATTTTGAtccaaaaaaaagtaaatagcGCTGAAACCATCTAGGAACTCATAGCGCACCTTTTTAAAGTCTCTGAGATAGGAGATATCTGTCCGACATCAAAAGGGgagagtttttttgttttatttaatccGTCGAAGGCACTTAACTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105438 True 775 lncRNA 0.46 2 36500648 36706609

Neighbor

gene id symbol gene type direction distance location
LOC120563182 NA coding upstream 117552 36368694 ~ 36383096 (+)
nat16l NA coding upstream 133623 36360700 ~ 36367025 (+)
LOC120563177 NA coding upstream 310233 36178207 ~ 36190415 (+)
LOC120563175 NA coding upstream 371406 36111050 ~ 36129242 (+)
dek LOC102312342,LOC102210945 coding upstream 390516 36092199 ~ 36110132 (+)
atp2c1 LOC103369286 coding downstream 53901 36760510 ~ 36792668 (+)
LOC120563178 NA coding downstream 102951 36809560 ~ 36829422 (+)
aldh5a1 aldh5a1 coding downstream 148810 36855419 ~ 36869334 (+)
pik3r4 pik3r4 coding downstream 188780 36895389 ~ 36924827 (+)
LOC120562694 NA coding downstream 618292 37324901 ~ 37326438 (+)
G78798 NA non-coding upstream 84764 36398049 ~ 36415884 (+)
G78770 NA non-coding upstream 161094 36335117 ~ 36339554 (+)
G78776 NA non-coding upstream 211494 36288792 ~ 36289154 (+)
LOC120563188 NA non-coding upstream 328484 36161780 ~ 36172164 (+)
G78756 NA non-coding upstream 412552 36087873 ~ 36088096 (+)
G78870 NA non-coding downstream 45482 36752091 ~ 36794092 (+)
G78871 NA non-coding downstream 46506 36753115 ~ 36907622 (+)
G78882 NA non-coding downstream 106106 36812715 ~ 36815976 (+)
G78907 NA non-coding downstream 207159 36913768 ~ 36980636 (+)
G78889 NA non-coding downstream 296974 37003583 ~ 37048033 (+)
LOC120563181 LOC107378893,LOC103370072 other upstream 35418 36392252 ~ 36465230 (+)
G78772 NA other upstream 149653 36258160 ~ 36350995 (+)
G78759 NA other upstream 309809 36110851 ~ 36190839 (+)
LOC120562279 NA other upstream 612476 35865842 ~ 35888172 (+)
LOC120562275 NA other upstream 726660 35743295 ~ 35773988 (+)
G78888 NA other downstream 132613 36839222 ~ 36939954 (+)
G78989 NA other downstream 724562 37431171 ~ 37432679 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 824081 37530690 ~ 37550602 (+)
cmtm7 cmtm7 other downstream 1172307 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 1349807 38056416 ~ 38145804 (+)

Expression


Co-expression Network