G78825


Basic Information

Item Value
gene id G78825
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36684833 ~ 36720480 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105444
aaatggctttcAAACTCTCTCCtaactaaactttgacatcaACCAGTCTGATTCTCTCAACATGCTCAGACCTTAACTATTAGTCCAAATAATtcatcatttctgctttttttgaccccaaaaatgaggtataatgtcgtttaaattaggtttattgatcaCGAGGGTTGTTAAGTATGCATACGTTAagcagaaactttttgaaaacgggtcagctTTGACCCCCGAGGGTTAAGCCTCTTGTGGTTCAGTgttgggctgcaactaactattacttggattattttctggatgaatggatcagttgttttggtctctaaaatgtcagaaaatggcgAAAAATGTGGATCCGTGTTTCCCCTAAAAAGCCCCAAGaagacgtcctcaaatgtctcgttttgtccccaactcaaagatgtttagtttcctgtcccagaggagagaagacactagaacaatattcacatttaacacagctgacatcagagaagtttacttttatttctatAATAGCTGCTGATTAACTTAATAGTCGAGGACTAATGGATTGACCTTTGCAGCTGTACTTCAGTGTCTTCGGTGTCTGTGCTGCTCTGTTGGACTCCTCGCAGCTAGAAGAAGAGGTTTGAACCCTCCACAGGTTGTAGTGGAGGTGAGGTGTGAGAGGAGCGCTTGTTTCAGGGGTTTTTAGGGGGGGGTGGGAGGAGGTCTGTGTTTTAGTTGGAGCAGAGATGGTTGCTGTCGGTGCCGGCTGCCGACCAGATTAAACTGATGCTTCAGATCTTATAACGTTAAAAGTTAGTCTGTTTAGTTGTGTGGCCTGTGAGTCCCAACTATTCGCTTTTAAACTTCAGGATGGACTTAAAGGAAGTCGCTCTGTGGCGCCGCGTTGCATGTTGTGTTGAACGTGATTTCTTGCAGTGAAAGTTGACAGAACTCATGCAGATGAGTGCACCTTCAGTGGCTTCGCGTGTAGTTTCAGACTGAACGCTGAAACCAGTTGTTGTCTGTGTCCGTGTGAACGTTTAAATAGAGAGATCAGCAACCtgagagacaaaaacattttaatttcaggttttttttaacttaaaattaGCTCTCAGTCATTTTTTATAACAACAGGCATCActgaaaaggtaaaaaaaaaagtcgtcTCGAAACAAAATGTCTAGAAAttactgtgtgtctgtctgactgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgg
>TU105445
gtctgtctgtctgtctgtctgtgtgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtctgtctgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtttgtgtgtctgtctctgtgaatgtctgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtctgtcaatcATCTGTTTGCTGTTATTATTATGCAATAAACCAGTTCATGCAGTTACACACTCTGCCAGTTGGGGGAGCTGTTgaccagcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatgtgtgtgtgtgtgcagactaGGGATCAGTTAAAGgccatatttcatatttttttccctttttttattgATGTATGAAATTAATATCTCTcacattattgttattaatgttattgTTTAGTTTGTTCCATGTTTTGGGGTTTCCGGAGAGAATAAAATGAGGGTGTTGCGTCTTTTGAATAATGAACTgactttttgttattgttgttctaTTCAGATTTTTATTTGAACCTTGTAATAAATAAAGATTAATAACCAGGGACTGTTGAGTGTGTTGTACATACGAACCAGAGGTGCTTCTGACGCTAACGGCAGAGATTTTTAAAGTTAACAGTACCGTCACATTATTttccagaaaataaaaaaaatgcaacctgAAACCACTGCAGTCTGTCTGTTTTATGTTCATATACAtgtatagagagccgaagtcccgccccttccggtggacctcatgggaccttaactcggaaaaaatatgaatggtagtgaacggggagaagcagattattttttgatcccgtttgaaatGAGCcgtgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105444 True 1232 lncRNA 0.42 2 36711100 36720480
TU105445 False 916 lncRNA 0.41 3 36684833 36713725

Neighbor

gene id symbol gene type direction distance location
LOC120563185 NA coding upstream 143303 36528481 ~ 36541530 (+)
LOC120563182 NA coding upstream 301737 36368694 ~ 36383096 (+)
nat16l NA coding upstream 317808 36360700 ~ 36367025 (+)
LOC120563177 NA coding upstream 494418 36178207 ~ 36190415 (+)
LOC120563175 NA coding upstream 555591 36111050 ~ 36129242 (+)
atp2c1 LOC103369286 coding downstream 40030 36760510 ~ 36792668 (+)
LOC120563178 NA coding downstream 89080 36809560 ~ 36829422 (+)
aldh5a1 aldh5a1 coding downstream 134939 36855419 ~ 36869334 (+)
pik3r4 pik3r4 coding downstream 174909 36895389 ~ 36924827 (+)
LOC120562694 NA coding downstream 604421 37324901 ~ 37326438 (+)
G78863 NA non-coding upstream 17470 36666597 ~ 36667363 (+)
G78862 NA non-coding upstream 26527 36658008 ~ 36658306 (+)
G78837 NA non-coding upstream 41342 36578832 ~ 36643491 (+)
G78836 NA non-coding upstream 42227 36534793 ~ 36642606 (+)
G78850 NA non-coding upstream 78516 36605671 ~ 36606317 (+)
G78870 NA non-coding downstream 31611 36752091 ~ 36794092 (+)
G78871 NA non-coding downstream 32635 36753115 ~ 36907622 (+)
G78882 NA non-coding downstream 92235 36812715 ~ 36815976 (+)
G78907 NA non-coding downstream 193288 36913768 ~ 36980636 (+)
G78889 NA non-coding downstream 283103 37003583 ~ 37048033 (+)
LOC120562456 dennd4b other upstream 14804 36580965 ~ 36670029 (+)
LOC120563181 LOC107378893,LOC103370072 other upstream 219603 36392252 ~ 36465230 (+)
G78772 NA other upstream 333838 36258160 ~ 36350995 (+)
G78759 NA other upstream 493994 36110851 ~ 36190839 (+)
LOC120562279 NA other upstream 796661 35865842 ~ 35888172 (+)
G78888 NA other downstream 118742 36839222 ~ 36939954 (+)
G78989 NA other downstream 710691 37431171 ~ 37432679 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 810210 37530690 ~ 37550602 (+)
cmtm7 cmtm7 other downstream 1158436 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 1335936 38056416 ~ 38145804 (+)

Expression


Co-expression Network