G78844


Basic Information

Item Value
gene id G78844
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36582192 ~ 36601220 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105480
ctctctctctctctctctgtctctctctctctctctctctctctgtctctctgtctctctctctctctccctctgtctctctctctctctctctctctgtctctctgtctctgtctctctgtctctctgtctctgtctctctgtctctctctgtctctctctctctctctctctctgtctccctctctctctctctctctctctctctctctctctctctctctctctctcttctctctctctctctctgtctctctctcaattcaattcaaggtAACTTTATTAGCATGACTGTAGGTACAGTGTTGCCAAAGCACAAGCAAAACAGCATAACATTTTCTACAGTAACAATTAGAACATTTACAGCCTTAAGGAagacagtaacacacacacaaagaaaaattGCATGTACACATTCCCTTTCTCTTTTTCGTACTCACGCACATAcgcatgtacacatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacat
>TU105481
ggatcagTTGATGGTGGGGCAGCCTGTGGCTCGCCCAGTGGAGGGTGCGCCCCATGTGGgtcttttctgtctgtctctctctctctctgtctctctctctgtctctctctctctctctctctctctctgtctccctctctctctctctctctctctctctctctctctctctctctctctctcttctctctctctctctctgtctctctctcaattcaattcaaggtAACTTTATTAGCATGACTGTAGGTACAGTGTTGCCAAAGCACAAGCAAAACAGCATAACATTTTCTACAGTAACAATTAGAACATTTACAGCCTTAAGGAagacagtaacacacacacaaagaaaaattGCATGTACACATTCCCTTTCTCTTTTTCGTACTCACGCACATAcgcatgtacacatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105480 True 534 lncRNA 0.45 2 36582192 36601220
TU105481 False 486 lncRNA 0.46 2 36600433 36601220

Neighbor

gene id symbol gene type direction distance location
LOC120563185 NA coding upstream 40662 36528481 ~ 36541530 (+)
LOC120563182 NA coding upstream 199096 36368694 ~ 36383096 (+)
nat16l NA coding upstream 215167 36360700 ~ 36367025 (+)
LOC120563177 NA coding upstream 391777 36178207 ~ 36190415 (+)
LOC120563175 NA coding upstream 452950 36111050 ~ 36129242 (+)
atp2c1 LOC103369286 coding downstream 159290 36760510 ~ 36792668 (+)
LOC120563178 NA coding downstream 208340 36809560 ~ 36829422 (+)
aldh5a1 aldh5a1 coding downstream 254199 36855419 ~ 36869334 (+)
pik3r4 pik3r4 coding downstream 294169 36895389 ~ 36924827 (+)
LOC120562694 NA coding downstream 723681 37324901 ~ 37326438 (+)
G78813 NA non-coding upstream 74378 36446647 ~ 36507814 (+)
G78798 NA non-coding upstream 166308 36398049 ~ 36415884 (+)
G78770 NA non-coding upstream 242638 36335117 ~ 36339554 (+)
G78776 NA non-coding upstream 293038 36288792 ~ 36289154 (+)
LOC120563188 NA non-coding upstream 410028 36161780 ~ 36172164 (+)
G78850 NA non-coding downstream 4451 36605671 ~ 36606317 (+)
G78862 NA non-coding downstream 56788 36658008 ~ 36658306 (+)
G78863 NA non-coding downstream 65377 36666597 ~ 36667363 (+)
G78825 NA non-coding downstream 83613 36684833 ~ 36720480 (+)
G78865 NA non-coding downstream 90978 36692198 ~ 36698972 (+)
LOC120563181 LOC107378893,LOC103370072 other upstream 116962 36392252 ~ 36465230 (+)
G78772 NA other upstream 231197 36258160 ~ 36350995 (+)
G78759 NA other upstream 391353 36110851 ~ 36190839 (+)
LOC120562279 NA other upstream 694020 35865842 ~ 35888172 (+)
LOC120562275 NA other upstream 808204 35743295 ~ 35773988 (+)
LOC120562457 NA other downstream 84716 36685936 ~ 36703993 (+)
G78888 NA other downstream 238002 36839222 ~ 36939954 (+)
G78989 NA other downstream 829951 37431171 ~ 37432679 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 929470 37530690 ~ 37550602 (+)
cmtm7 cmtm7 other downstream 1277696 37878916 ~ 37888006 (+)

Expression


Co-expression Network