G78865


Basic Information

Item Value
gene id G78865
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36692198 ~ 36698972 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105508
agcacgcactaataagacaacacgcactaataagacaacacgcactaataataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataaaccacaacacgcactaataaaccacaacacgcactaataagacaacacgcactaataagacaacacgc
>TU105509
agcacgcactaataagacaacacgcactaataagacaacacgcactaataataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataaaccacagcacgcactaataagacaacatgcactaataagacaacacgtgcaaataaaccacagcacgcaacaacagcacgcaacaataagacagcacgcactaataag
>TU105511
agcacgcactaataagacaacacgcactaataagacaacacgcactaataataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataaaccacagcacgcactaataagacaacacgcactaataaaccacagcacgcactaataagacaacacgtgcaaataaaccacagcacgcactaataagacaacacgtgcaaataaaccacagcacgcaacaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacg
>TU105513
taataagacaacacgcacaacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataaaccacagcacgcactaataagacaacacgcactaataagacaacacgtgcaaataaaccacagcacgcgctaataagacaacacgcactaataagac
>TU105514
caacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataagacaacacgcactaataaaccacagcacgcactaataagacaacacgtgcaaataaaccacagcacgcactaataagacaacacgcactaataagacaacacgtgcaaataaaccacaacacgcactaataataagacaacacgcactaataagacaacacgcactaataagacaacaagcactaataataagacaacacgcactaataagacaacacgcactaataagacaacacgtgcaaataagacaactcgcaacaataagacaacacgcactaataagacaacacgcactaataag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105508 False 269 lncRNA 0.39 2 36693007 36695532
TU105509 False 309 lncRNA 0.40 2 36693007 36693602
TU105511 True 416 lncRNA 0.40 2 36693007 36697047
TU105513 False 220 lncRNA 0.40 3 36692198 36694660
TU105514 False 371 lncRNA 0.39 3 36696783 36698972

Neighbor

gene id symbol gene type direction distance location
LOC120563185 NA coding upstream 150668 36528481 ~ 36541530 (+)
LOC120563182 NA coding upstream 309102 36368694 ~ 36383096 (+)
nat16l NA coding upstream 325173 36360700 ~ 36367025 (+)
LOC120563177 NA coding upstream 501783 36178207 ~ 36190415 (+)
LOC120563175 NA coding upstream 562956 36111050 ~ 36129242 (+)
atp2c1 LOC103369286 coding downstream 61538 36760510 ~ 36792668 (+)
LOC120563178 NA coding downstream 110588 36809560 ~ 36829422 (+)
aldh5a1 aldh5a1 coding downstream 156447 36855419 ~ 36869334 (+)
pik3r4 pik3r4 coding downstream 196417 36895389 ~ 36924827 (+)
LOC120562694 NA coding downstream 625929 37324901 ~ 37326438 (+)
G78863 NA non-coding upstream 24835 36666597 ~ 36667363 (+)
G78862 NA non-coding upstream 33892 36658008 ~ 36658306 (+)
G78837 NA non-coding upstream 48707 36578832 ~ 36643491 (+)
G78836 NA non-coding upstream 49592 36534793 ~ 36642606 (+)
G78850 NA non-coding upstream 85881 36605671 ~ 36606317 (+)
G78870 NA non-coding downstream 53119 36752091 ~ 36794092 (+)
G78871 NA non-coding downstream 54143 36753115 ~ 36907622 (+)
G78882 NA non-coding downstream 113743 36812715 ~ 36815976 (+)
G78907 NA non-coding downstream 214796 36913768 ~ 36980636 (+)
G78889 NA non-coding downstream 304611 37003583 ~ 37048033 (+)
LOC120562456 dennd4b other upstream 22169 36580965 ~ 36670029 (+)
LOC120563181 LOC107378893,LOC103370072 other upstream 226968 36392252 ~ 36465230 (+)
G78772 NA other upstream 341203 36258160 ~ 36350995 (+)
G78759 NA other upstream 501359 36110851 ~ 36190839 (+)
LOC120562279 NA other upstream 804026 35865842 ~ 35888172 (+)
G78888 NA other downstream 140250 36839222 ~ 36939954 (+)
G78989 NA other downstream 732199 37431171 ~ 37432679 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 831718 37530690 ~ 37550602 (+)
cmtm7 cmtm7 other downstream 1179944 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 1357444 38056416 ~ 38145804 (+)

Expression


Co-expression Network