G78882


Basic Information

Item Value
gene id G78882
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36812715 ~ 36815976 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105546
tctgagccctgcaccttctcttgtctctcgctttctccttcctcctctcggtgatgctctccCTCCATATCTTCACCGCTGTGGtcttctccacctcctcctgtccctggtcgccttggccttgtattctgtctctgtcacgtttctgttgcccttttctctctccttccacctcttctctctctccttccacctcttccctctctccttccacttcttttctctctccttccacctcatcttctccgtctaccttgctcacttgttcattttctatttctctcgcctttctctttggagacaaaaactgaatatgctacctttcctcttcatttctgtaCGATTCAAAGTAACgatgttttccttgacagacgttgaatcaatattagcttttgtagcctacttcccacagaacaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105546 True 419 lncRNA 0.47 2 36812715 36815976

Neighbor

gene id symbol gene type direction distance location
atp2c1 LOC103369286 coding upstream 20047 36760510 ~ 36792668 (+)
LOC120563185 NA coding upstream 271185 36528481 ~ 36541530 (+)
LOC120563182 NA coding upstream 429619 36368694 ~ 36383096 (+)
nat16l NA coding upstream 445690 36360700 ~ 36367025 (+)
LOC120563177 NA coding upstream 622300 36178207 ~ 36190415 (+)
aldh5a1 aldh5a1 coding downstream 39443 36855419 ~ 36869334 (+)
pik3r4 pik3r4 coding downstream 79413 36895389 ~ 36924827 (+)
LOC120562694 NA coding downstream 508925 37324901 ~ 37326438 (+)
LOC120561884 NA coding downstream 520095 37336071 ~ 37351571 (+)
LOC120561883 NA coding downstream 539007 37354983 ~ 37359625 (+)
G78870 NA non-coding upstream 18623 36752091 ~ 36794092 (+)
G78825 NA non-coding upstream 92235 36684833 ~ 36720480 (+)
G78865 NA non-coding upstream 113743 36692198 ~ 36698972 (+)
G78866 NA non-coding upstream 114208 36694103 ~ 36698507 (+)
G78863 NA non-coding upstream 145352 36666597 ~ 36667363 (+)
G78907 NA non-coding downstream 97792 36913768 ~ 36980636 (+)
G78889 NA non-coding downstream 187607 37003583 ~ 37048033 (+)
G78921 NA non-coding downstream 193458 37009434 ~ 37010480 (+)
G78922 NA non-coding downstream 203228 37019204 ~ 37020468 (+)
G78925 NA non-coding downstream 225715 37041691 ~ 37089414 (+)
LOC120562457 NA other upstream 108722 36685936 ~ 36703993 (+)
LOC120562456 dennd4b other upstream 142686 36580965 ~ 36670029 (+)
LOC120563181 LOC107378893,LOC103370072 other upstream 347485 36392252 ~ 36465230 (+)
G78772 NA other upstream 461720 36258160 ~ 36350995 (+)
G78759 NA other upstream 621876 36110851 ~ 36190839 (+)
G78888 NA other downstream 23246 36839222 ~ 36939954 (+)
G78989 NA other downstream 615195 37431171 ~ 37432679 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 714714 37530690 ~ 37550602 (+)
cmtm7 cmtm7 other downstream 1062940 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 1240440 38056416 ~ 38145804 (+)

Expression


Co-expression Network