G78947


Basic Information

Item Value
gene id G78947
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37201191 ~ 37206248 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105638
CCTGGGTCTCCTCTCGGTCCTTTAGCTCCATCTGTTCCCGTCAGTCCCTGCTCTCCGTCGATTCCGCCCAGTCCGTTTTCTCCGTTCTCCCCCCTGTTGCCCGAGACTCCTCTGTAGCCCTTTTGTCCTCTGATTCCGGGACAGCCCTCGATGCCCGGCGGTCCGAAGGGTCCAGGTGGCCCTCGCTCACCAGGAGCTCCCTCGTCTCCCGGGAAACCCGGCTGGCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105638 True 229 lncRNA 0.65 5 37201191 37206248

Neighbor

gene id symbol gene type direction distance location
pik3r4 pik3r4 coding upstream 276364 36895389 ~ 36924827 (+)
aldh5a1 aldh5a1 coding upstream 331857 36855419 ~ 36869334 (+)
LOC120563178 NA coding upstream 371769 36809560 ~ 36829422 (+)
atp2c1 LOC103369286 coding upstream 408523 36760510 ~ 36792668 (+)
LOC120563185 NA coding upstream 659661 36528481 ~ 36541530 (+)
LOC120562694 NA coding downstream 118653 37324901 ~ 37326438 (+)
LOC120561884 NA coding downstream 129823 37336071 ~ 37351571 (+)
LOC120561883 NA coding downstream 148735 37354983 ~ 37359625 (+)
LOC120562463 NA coding downstream 155976 37362224 ~ 37377784 (+)
LOC120561882 NA coding downstream 180869 37387117 ~ 37391992 (+)
G78925 NA non-coding upstream 111777 37041691 ~ 37089414 (+)
G78889 NA non-coding upstream 153158 37003583 ~ 37048033 (+)
G78922 NA non-coding upstream 180723 37019204 ~ 37020468 (+)
G78921 NA non-coding upstream 190711 37009434 ~ 37010480 (+)
G78907 NA non-coding upstream 220555 36913768 ~ 36980636 (+)
G78961 NA non-coding downstream 89318 37295566 ~ 37379314 (+)
G78990 NA non-coding downstream 227098 37433346 ~ 37467880 (+)
G78998 NA non-coding downstream 286558 37492806 ~ 37494603 (+)
G78999 NA non-coding downstream 293642 37499890 ~ 37500110 (+)
G79004 NA non-coding downstream 319628 37525876 ~ 37530597 (+)
G78888 NA other upstream 261237 36839222 ~ 36939954 (+)
LOC120562457 NA other upstream 497198 36685936 ~ 36703993 (+)
LOC120562456 dennd4b other upstream 531162 36580965 ~ 36670029 (+)
LOC120563181 LOC107378893,LOC103370072 other upstream 735961 36392252 ~ 36465230 (+)
G78772 NA other upstream 850196 36258160 ~ 36350995 (+)
G78989 NA other downstream 224923 37431171 ~ 37432679 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 324442 37530690 ~ 37550602 (+)
cmtm7 cmtm7 other downstream 672668 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 850168 38056416 ~ 38145804 (+)
G79351 NA other downstream 963806 38170054 ~ 38324620 (+)

Expression


Co-expression Network