G78998


Basic Information

Item Value
gene id G78998
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37492806 ~ 37494603 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105698
gAAACGTTTATTATTGTATGGATTTCACAATGCAGCCAGATCCGGATCCCTtggcgttatgccgtaaaccgtttaaatctgagcatgcgcaactcacatctgcactcgactcacatcgggtagtgacagaaGCCATACAACATTTCTTTGGACCtggtgaaatgacaataaagagcATACTGTATGTCTTCATCCTAGAATATTTTAGGTCTTCTTCATTTGCGTGTCACCACAGAAACTGTAGGGGTTAGTTTAATGATTCCCATTTCAAAGAAGTGGAACTGGTTGATGTCAAactctttgtctctttgtttgttGACAGAGTTGAACTGAAGCCTGAAGCAGCTCAAAGCTCATGTTTACACGGGATTTCGTAATCCTAAAAATTAACACTTTTATCTCCGTTCATTGTTCAGTATTTGTTGCTCTTGTGAGCccacagaaaaacattttagGATATAGAACATTTTAATGGCAAACAAAATGATTTAAAGAGCAACTTAAGAATTTTTCAAgctgtctaagtgactgatgggaacaacaaatTTTAacttggtccagtattaagatgAACCGGGCTGTATTGTAACCCTACAGAACCAATGTTCAGCgtcagtcagcgtccactagcgactcagattattattctaagtgtctgacaacattatggaaaataAGTCTGTTGATCATAATAGTATGCTCAATGGAGTCAAAGGCAGATGAACCGTGTGTGCCCCAGACTCAGCTGACATCATAATGTCACTAGAGGTTGtccaggttttgtttttgttgttgttggctcacttttactcacgacatgctaacggcaacataggattccattcactatgctaagctaagctagcggcggcgctgccagactaagacaatgcatgcactgagacaaaaatgcgtttgcccacctatataaatatagaggagatggTGATAACTCTATTTTAACAAtcgtggcgtattcctttaagcctttatttatagaggacagctgaagacatgaaaagggagagagagggggaatgacatgcagcaaagggccgcaggtcattGTCGAACCAGAGGccactgcgttgaggagtaaacctctatacatgggtgcctgctctaccaactgagctaaccaggcacCCAACCTGACTGAAATTTGTCAAAAATGCCATGGTTCTCAAGGAAAGTGATAAGTTGCTCTGCTACAACCTTTTCTAAAAATGTTGACataggatcttactctttaactaaaaggtctatctctgtagggatcctttcataatgttgtcagacacttagaataataatctgagtctgtcagcagcgaaaacttttagtggacgctgactgactctgaacatttgtcctgtaGGATTACATTACAGCCCGGTTCACAGCTGCcagttacagcgttctcgctcaatactggaccaatttcaaagattgttgttcccattagtcacttagacacaaacacaaagggaAATGAGGGGTCCACGTAGAAAAAAACCTgtgaagttaccctttaaagtcTGTCTTCTTTTCATATCTAATAACATTTATGAAATTACAGGACCAGAATCCTCTGGCTCAGAACAGTCCCAGGTGAAGGTCACCGCTGCCGGCCGATTGGTTCAGCAGCAACGTGGGTCAGGTTAACAGGAAGTTGTCATCGCTGTGAGCAAAGGCGTCCCGGCCAGCGAACAGACTGGAGCTGCTGGCGCTGATGCCGCCCACGGCCGGCAGGTAGGCATGATGAAGGATTGGCAGCTGCATGGACACACGGCGCCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105698 True 1798 lncRNA 0.43 1 37492806 37494603

Neighbor

gene id symbol gene type direction distance location
tmem116 NA coding upstream 67986 37404963 ~ 37424820 (+)
LOC120561882 NA coding upstream 100814 37387117 ~ 37391992 (+)
LOC120562463 NA coding upstream 115022 37362224 ~ 37377784 (+)
LOC120561883 NA coding upstream 133181 37354983 ~ 37359625 (+)
LOC120561884 NA coding upstream 141235 37336071 ~ 37351571 (+)
LOC120561682 NA coding downstream 71153 37565756 ~ 37568029 (+)
LOC120562860 NA coding downstream 82876 37577479 ~ 37578431 (+)
LOC120562465 NA coding downstream 83994 37578597 ~ 37579855 (+)
LOC120561715 NA coding downstream 88520 37583123 ~ 37586138 (+)
LOC120562469 NA coding downstream 211502 37706105 ~ 37709961 (+)
G78990 NA non-coding upstream 24926 37433346 ~ 37467880 (+)
G78961 NA non-coding upstream 113492 37295566 ~ 37379314 (+)
G78947 NA non-coding upstream 286558 37201191 ~ 37206248 (+)
G78925 NA non-coding upstream 403392 37041691 ~ 37089414 (+)
G78922 NA non-coding upstream 472338 37019204 ~ 37020468 (+)
G78999 NA non-coding downstream 5287 37499890 ~ 37500110 (+)
G79004 NA non-coding downstream 31273 37525876 ~ 37530597 (+)
G79011 NA non-coding downstream 48302 37542905 ~ 37543545 (+)
LOC120562911 NA non-coding downstream 62072 37556675 ~ 37560786 (+)
G79262 NA non-coding downstream 112582 37607185 ~ 37645567 (+)
G78989 NA other upstream 60127 37431171 ~ 37432679 (+)
G78888 NA other upstream 552852 36839222 ~ 36939954 (+)
LOC120562457 NA other upstream 788813 36685936 ~ 36703993 (+)
LOC120562456 dennd4b other upstream 822777 36580965 ~ 36670029 (+)
LOC120563181 LOC107378893,LOC103370072 other upstream 1027576 36392252 ~ 36465230 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other downstream 36087 37530690 ~ 37550602 (+)
cmtm7 cmtm7 other downstream 384313 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 561813 38056416 ~ 38145804 (+)
G79351 NA other downstream 675451 38170054 ~ 38324620 (+)
LOC120562476 NA other downstream 687547 38182150 ~ 38188763 (+)

Expression


Co-expression Network