LOC120563186 (LOC103369286,LOC103131393,LOC106962355,LOC106910391)


Basic Information

Item Value
gene id LOC120563186
gene name LOC103369286,LOC103131393,LOC106962355,LOC106910391
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 36664542 ~ 36748238 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105912
GCGGACTTGGTCGTTTGTCAGAGGAAGTCGCTCCGCGCTGGGATTTCACGGAAGATGCTGAAGAAACGGGAGCTGTTGctttCCGAGGAGAGACAACAATTCAGTGAAGATGAGACCATGGTCCCGGTACTAACCTCCAGAAAAGCCAGCGAACTCCCCGTCAACGAAGTAGTGTGTGTCCTGCAGGCGGACCTGCAGCTGGGTCTGACCCAGGGCGAGGTGAGCCGGAGGAGAGCCTACCACGGCTGGAACGAGTTCGACATCAGTGAAGACGAGCCGCTATGGAAGAAATACATCTCCCAGctcaaagacc
>XM_039807342.1
gctcCTAATCAGAAACAATCCTCTCACCTTTCCTCCCACGGCCTCGCCACTCTTCTCCGTTTGCCCGAGGCCACTTTGGTCCATCAGAGGACGGATGAACCGCTGCTACTTTAAAGGATTAAGAGGTGCAGCGCACCGAGAGctttCCGAGGAGAGACAACAATTCAGTGAAGATGAGACCATGGTCCCGGTACTAACCTCCAGAAAAGCCAGCGAACTCCCCGTCAACGAAGTAGTGTGTGTCCTGCAGGCGGACCTGCAGCTGGGTCTGACCCAGGGCGAGGTGAGCCGGAGGAGAGCCTACCACGGCTGGAACGAGTTCGACATCAGTGAAGACGAGCCGCTATGGAAGAAATACATCTCCCAGGTAACCCGTGCATCACGCTAAACGGTGTCTCTGAAGCCCGGTTCAGAccaaagtagggatgcaccgaatccagattttt
>XM_039807343.1
ATCACAGCCTGTCAGCGGACTTGGTCGTTTGTCAGAGGAAGTCGCTCCGCGCTGGGATTTCACGGAAGATGCTGAAGAAACGGGAGCTGTTGctttCCGAGGAGAGACAACAATTCAGTGAAGATGAGACCATGGTCCCGGTACTAACCTCCAGAAAAGCCAGCGAACTCCCCGTCAACGAAGTAGTGTGTGTCCTGCAGGCGGACCTGCAGCTGGGTCTGACCCAGGGCGAGGTGAGCCGGAGGAGAGCCTACCACGGCTGGAACGAGTTCGACATCAGTGAAGACGAGCCGCTATGGAAGAAATACATCTCCCAGGTAACCCGTGCATCACGCTAAACGGTGTCTCTGAAGCCCGGTTCAGAccaaagtagggatgcaccgaa

Function

NR:

description
PREDICTED: calcium-transporting ATPase type 2C member 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105912 False 313 TUCP 0.56 4 36664542 36748224
XM_039807342.1 True 446 mRNA 0.55 3 36719493 36731530
XM_039807343.1 False 385 mRNA 0.56 3 36719504 36748238

Neighbor

gene id symbol gene type direction distance location
LOC120562455 NA coding downstream 105078 36552444 ~ 36559464 (-)
LOC120563179 npr1,olgc2 coding downstream 346834 36192330 ~ 36317708 (-)
LOC120563092 NA coding downstream 574050 36075620 ~ 36090492 (-)
kcnv1 kcnv1 coding downstream 593439 36063562 ~ 36071103 (-)
LOC120561730 NA coding downstream 666771 35994652 ~ 35997771 (-)
LOC120563048 NA coding upstream 93263 36841501 ~ 36852068 (-)
col6a4a NA coding upstream 179826 36928064 ~ 37026751 (-)
LOC120562575 NA coding upstream 501123 37249361 ~ 37315604 (-)
rpp25l NA coding upstream 776263 37524501 ~ 37529217 (-)
LOC120562909 NA coding upstream 784727 37532965 ~ 37553789 (-)
G79114 NA non-coding downstream 21047 36621885 ~ 36643495 (-)
G79115 NA non-coding downstream 23255 36590624 ~ 36641287 (-)
G79108 NA non-coding downstream 74088 36534756 ~ 36590454 (-)
G79105 NA non-coding downstream 78936 36533801 ~ 36585606 (-)
G79113 NA non-coding downstream 82261 36581935 ~ 36582281 (-)
G79144 NA non-coding upstream 10211 36758449 ~ 36759135 (-)
G79145 NA non-coding upstream 11398 36759636 ~ 36792912 (-)
G79171 NA non-coding upstream 104993 36853231 ~ 36917822 (-)
G79181 NA non-coding upstream 140938 36889176 ~ 36889852 (-)
G79182 pik3r4 non-coding upstream 147153 36895391 ~ 36899782 (-)
creb3l4 NA other downstream 304962 36339081 ~ 36359580 (-)
G79034 dek,LOC100692760,LOC101471355,LOC102210945,LOC102312342 other downstream 558867 36102997 ~ 36105675 (-)
G78733 LOC104935873 other downstream 638000 36024731 ~ 36026542 (-)
plekhf2 plekhf2 other downstream 1355145 35268357 ~ 35309397 (-)
G78496 NA other downstream 1487303 35173866 ~ 35177239 (-)
kiaa0319 LOC103370079 other upstream 119429 36867667 ~ 36894638 (-)
LOC120562574 NA other upstream 340586 37088824 ~ 37235129 (-)
LOC120561551 NA other upstream 744562 37492800 ~ 37519394 (-)
LOC120562472 NA other upstream 995846 37744084 ~ 37796766 (-)
LOC120562474 NA other upstream 1210211 37958449 ~ 37971348 (-)

Expression


Co-expression Network