LOC120562574


Basic Information

Item Value
gene id LOC120562574
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37088824 ~ 37235129 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU105962
AGGGTTCGCCTGGACAGAAGGGCCAGCCGGGTTTCCCGGGAGACGAGGGAGCTCCTGGTGAGCGAGGGCCACCTGGACCCTTCGGACCGCCGGGCATCGAGGGCTGTCCCGGAATCAGAGGACAAAAGGGCTACAGAGGAGTCTCGGGCAACAGGGGGGAGAACGGAGAAAACGGACTGGGCGGAATCGACGGAGAGCAGGGACTGACGGGAACAGATGGAGCTAAAGGACCGAGAGGAGACCCAGGAAACCCAGGTATCCCGGGTatcagaggggagggggggctgaAAGGAGAGCGAGGACTCAGAGGAGATCCGGGGGAACCGGGGGCTGATAACACCGCCAGAGGACCCAAAGGAGAGCGCGGCTACCCAGGTTTACCGGGTTCCCCTGGACGGGACGGGGATTCAGGTGATAAAGGAGACCCTGGAAACACGGGTCCAGATGGAAGAAGAGGCTCCGGGGGAGGGAAGgGTGAACCGGGAACAAAGGGAGAGCCAGGACTTCCAGGCAGCCCAGGAGCCGCTGGTCCACAGGGACGCAGGGGAGGAAACGGAGACCGCGGACCGAAAGGAATCTCTGGCTTCCCTGGACCTCAGGGTGGCCCGGGACCAGCTGGACCCCCGGGACAACCTGGACGTCGCGGCGCTAACGGACAGAAGGGCCAACCAGGAGACCCGGGTGTTAAGGGGAGTACGGGACCAGTGGGACCGATAGGACCGCCGggtcAGGATGGCCAAGACGGTTATGGAACTAAAGGATCCAAAGGTGTTAAGGGAGATCCTGGTTTCCCTGGTTACCCTGGTCTAGACGGTGAGGACGGTGTGAAAGGAACCAAAGGATACCCCGGACGTAAAGGGAACTATGGCCGAGGGGGGAACTCAGGGCGGCCGGGAAAGCCAGGCGAGGCTGGAGAACCGGGATATGACGGACACAGGGGTGCCAAAGGTCCACCTGGAACCCCAGCCATGAGTGAGTGCCAGATGATCAGCTACATCAGAGACAACTGTGCATGTTGCCAAGGTGAATCAAGGTGCCCGGTCTACCCCACCGAGCTGGTGTTTGGTCTGGACATGTCGCAGGACGTGACCCCTGCAGCCTTTGAGAGGCAGCGCTCCGCCCTCCTCTCCCTGCTGGACGACATCACCATCTCTGAGAGCAACTGTCCGTCTGGTGCTCGCGTCGCCGTGGTGGCTTACAGCGCCTACACCAAGTACATGATCCGCTTCCAGGACTACCAGCGCAAGCCTCAGCTGATCGAAGCTGTGAAGAACATCGCCCTGGAGAGGACGTCCATCAGGCGCAATCTGGGGGCCGCCATGCGCTTTGTGGGTCAGAACGTCTTCAAACGTGTTCGTAAAGGACTGATGATGAGGAAGGTGGCAGTCTTCTTCTCCAGTGGGCCGTCAGAGGATAATTCAGACATTGTCACCGCCATGATGGAGTACCGAGCCCTCAAAATCGTCCCAGTGGTCATCTCTCTGCGAGGCGCTCCGGAAGTTGAACGAGCGATAAAGGTCGACGACACAGGAAACTCTTTGTTCACCGTGCTGGGGAGGGACGTGGCTGCTGACCTGCTGAAGGTCAAGAACTGTGCAATCTGTTACGaCCCCTGTAGGCATTCAGAGTTGTGCCCCTCGATCGAGGACATCCCGACACCTCAACAAGTCAACGTGGACCTGGTTCTGGTGCTGGACGGCTCCAGGGAGATGCAGGCCGATGAGTACGCCGGCGGCCAGC
>XM_039806349.1
aAAATGGACAGGTTTTTGTCGAAAGAAGAGAGCAAGAAAGACGCCGAACTCAATCGCCAGGAACATAATGTGGtgggagatggagggaggagtcTCGGCGGCTCGGTCctacccctcctcctcctcttcttcatcctccagAAAACGAGGCTGCAGCTACATGACTGTGGGACTCCTGTGTTTGGGTGCAGGGGAAGCGCATACCACAGCAGATCTGAAGGGAGAAACTCACGAGCCATCCCAGCATGATGGGAAGAACCAGTTTGGTCTTCAGCCTCATCGTAGCAGCATTGCTCTCTGGCATCGCTGCTCAGGGAACAGATTGTGAAAACGCCAATGTGGCCGACATCGTCTTCCTAGTTGATGGCTCCTCCAGCATCAGCCCTGGAAACTTTCAGGAGGTCCGGTCTTTTCTCCGCAACTTCATCAGAGCCCTCGACATTGGCCCCAACAAAGTTCGCATCGGCTTGGCTCAGTACAGTGATAAACGTCGACAGGAGTTCCTGCTGAAGGATCACTCTGACAAGAAGTCTCTGCTGGCTGCCGTGGAAAGAATTCAACTCGTAGGAGGAGGCACTGAAACAGGAAAAGCCATCGACTTCCTCCAGAAGCAGTACTTCACCAAAGAGGCGGGAAGCCGAGTTGGCCAACGGGTGCCTCAGATCGCTATAGTTATCACAGATGGGGACTCCACTGATGAGGTGAAGGAACCCGCCCAGAAGCTTAGGCAGGACGGAGTCATTGTGTTTGGCATCGGGGTGGGAGAAGCCAACCGGAAGCAGCTTGAGTCCATCGCCAACTGGCCTCCAGATCGCTTCCTTCACTCATTAGATAGCTATCAGGCTCTGCAGGAGCAGATGGAAATGCTGCTGGAaactgtttgtctctctgtggtagCTCAAAAGGAAGCTTTGGCTGAAAGGTTTGCAGATATTTTCTTCCTGGTGGACAGCGGCATAGCTCAACAACCGTTCACGTTATTTAAATCTGAACTTCTGAAATTGATCAATCAAATTAATGCCGGAGCATCCACCTACCGTGTCGGTGTGGCGCAGTACGGTCAAGATACCCAGGTTGAATTCCTTCTCAATGTTCATCAAACTAAACAGCAACTCCTGTCTGCTGTCAGAGGTTTCCGCCTGCGCCCACAACCCAACCAACCACATTACCTGGGTAGGGCTCTGCTGGACGCCAACACTCGCTTTTTTACCAGTGAGGCGGGGGGTCGTGCACACCTAGGCGCCCGACAGTTCCTGGTCGTTGTGAGTGGAAGAGACTCAGATGATCTTGTGTCTAAGGAAGCTCAAAAGATCAAATCAGCAGGGGTTACTGTTGTTGGGATGAGTGCAGGTGCAAGTGTGGATGCCTTACAACGTTTTGTCACTTCTGGGTACGCATTTGATTCTCCCAGAGTACTTATTTTGAAGGATTCCATCGTGACTGAGAAAAAGGACGACATTACTGAAGATTGCAAAGGAGCCAATATTGCAGACATTGTGTTCATCGTTGATGAGTCGGGAAGCATTGGAGAAGAAAACTTTAAGCTGGTGCGCACTTTCCTGCACTCGATTGTGAGCAGCCTGGATGTAAGACCGAATAAAGTCAGAGTGGGCATCGTTACGTACAACGAGGAGTCCACACCACAGGTCTACCTCGACACGTTCAATAACAGGAAGGAAATCCTCCAGTTCATCAACATCCTGCCCTACAGAGGAGGTGGAACGAACACTGGAGCTGCCCTAAACTTCACTTGGGACAATATCTTCATTAAGAAAAAGGGCAGCAGGAAAAGTAAGAATGTCCAGCAGGTGGCGGTGGTGATCACCGACGGTGAATCCCAGGACAGCGTGCATGAAGCAGCAATCCGTCTCCGTCGGGAAGATGTCACCGTATACTCTGTAGGAATCAAAGATGCCAACATGGAAGAGCTGAGGGACATGGCGTCTCACCCCATTGATAGGCATGTTTTTAATGTGAACAGTTTCACCGAGCTGAAGTCCCTGAAGCACAGCCTGCAGAAAGTCATTTGCGAAAACATCATTGACCAAGCCAAAGTCAGTGCAAGGGAATCCGAGACCAAAAAAGCATGTGAATTAAAGGAGGAAGCTGACATCTTCTTCCTGATGGATGACTCAGGAAGCATTGAGAACCAAGACTTCGAAGACATGCAGAACTTCATCATCAAATTTTTTCAGACCTTCAAGATTGGGCCAGATCGTGTCCGCGTCGGGCTTGTGAAATATGCTGTTAATCCAACTTTGCAATTTGACCTGACAGCCTCCTCAAATGTTGATAACCTGAAGAAATCTGTGAAGAATATTGCACATGAAGGAGGTGGGACAGAGACAGGAAAAGCCCTAAAATCCATGGGCCCACACTTTAGGAGAGCGATGCAAACTCGTGGTCACAAGGTCCCAGAGTACCTGATTGTCATCACAGATGGTAAATCCACTGATGACGTCAAGGCTCCAGCAGAAGAACTGAGGCGGCAGGGTGTCATCATCTTTGCCATCGGGGTGAAAGACTCAAACGAAGTTGAGCTAAAAGATATTGCAGGCGACCCCAAGAGGACTATCCAGGTCAATAATTTTGATGCCTTGAAATCCATCAACAACGACATCATCAGAGAAATCTGTAATGAAGATGTTTGCAGAGATATACAGGGCGACATATTTTTCTTAGCTGACGGTTCTGAGAGCATCTCTAAGGATGACTTCAAGAAAATGAAAGAATTCATGAAAGCTGTCATCAGCAAGCCTGCCATCGAGCAGAATAAGGTGCACATCGGTCTCATGCAGTTCAGCTCTGACAACCAGCTGGAGTTTCCCCTCAGCCGCTACTACAGCAGAGAGGGAATTCTGAAAGCCATCGATGATATGACTCAGCTGGACCAAGGCACACTCACAGGAAAGGCCCTTACTGAGGTGTCGCAGTATTTCGATAAAACCAATGGAGGGCGTCCTGATGTCAGTCAGAGGCTGATCGTGCTAACAGACGGTGAGGCCAAAGACGAGGTCATAGGCCCCGCTGAGGCTCTGAGGAAAAAGGGAGTGGTAATCTACGCCATCGGAGTGGTGGACGCCAACACCACCCAGCTGGCTGATATCAGCGGCTCAACAGACAGGGTGTATTCTGAGAAAAACTTTGATGCGCTGAAGGACTTGGAGAGCAAGGTGGCTTTGGATCTCTGTCGGAAAAaTTGTACAATAAATAATGCTGACATTATTTTCCTGGTGGACAGCTCTGAAAGCATAAATGAAATCCAGTATAGAAGCATGCGAATCTTTATGGAGTCAATGGTGAATCACACCACAGTTGGCAAGGACATGACTCGTTTTGGACTCATTTCCTACTCTGATCTACCCCAGTCTCATTTTTCTTTGCATGACTATGACTCCAAACGAAAAGTTCTTTCAGCAATACCAATGAAGAAGCCAAAAGAAGGAGGCACCAAGACGGGCGAGGCCTTGCAATTCTCGTTGGAGTACTTTAACGCTGTACATGGTGGCCGTAGAGCATTGAAAGTTCCTCAGATTCTCATGGTGATCACAGACGGGGCTGCCAACAACCCTGACATCTTAAAGGAGCACTCTGATGCACTACGAGACAACGGGATCATCGTCATCAGTGTCGGAGTGAAAGAAGCAAACATTGAGGAGCTAGAGACTATGGCTGGTGGCGACAAATCCAAAGTTTTCTTTGTGGACAATTTTAAGGCTCTAGAAACTCTTTACAAAAAAATGTCTTCTGCCTTCTGCAATTCCACAAAGCCAGCTTGCAAGACTGGCGATATTGTCTTCCTACTTGATCGGTCTAGCAGCATCGACCGAGACAAACACAATATCATGAAAAACTTCACGACAACATTAGTCAACAGCTTTGAAGTCGGTGAAAAGTTGGTGCATATTGGACTTTGCCAGTTCAGTGACAATCCTAAGGATGAGTTTTACCTCAACAAGTACTACAATAAGGAGGATTTGAACACACAAATCCTTAATGCGATTTACACAGGTGGAAACACCTACTTAGGGAGAGCATTGGATCACGTTAAGGATTACTTCGAGGGGTCGCGGGGCAGCCGTGACCAGGTCCCCAAAAATCTGGTGTTGATCACAGATGGTGATTCTCATGATGATGTGGAGGATGCAGCTGACGTTCTCAGGGATCGGAACATTAATGTGTTTGCTATCGGCGTTGGAGACGTCCACGACATGCAGCTCCTGCAGATTGCTGGCACCCCAGAGAGGATGTTCACTGTGCGGAACTATGATGTTTTGCACTCTATCAAGCAAAGGGTGGTCGACGGCATGTGTGGTGATGACCCAGACCCTATACCCCCCACACCGCCACCCCCACCGCCACCCCCGAAAGACTGCACCATTGATATCGCCATAGGATTCGATATTTCTCGAAGGACTGGAGCTGTTGGTGATTTGCTGGTCAGAAGCAACACCAAGCTCCAGAACTTCCTGCCACAGATCCTCAATTACATTTCCTCATTTGAAGACCTGTGCTGTGTCGGCCCCACACCCGTCAAGCCCAACATCGCCTTCCAAGTGGTAGATAGAGATGGGCGTACCTTGTACGACACAAACTTTGAGGGCTACAGCGCGACCATGGTGAATAAAGTCATGATCCTGCCGATTTCAGAACCTTCCTATTTCAACACTGCCATGCTAAACTCCTTCAAGCAGATGTTCAAGATCAAGTCCAAAGCTCATGTGAAGGTGCTGGTGATCTTCTCAGATGGACTCGATGAAAGGGAACTGAAGCCTGAATTAGAGCTGCTGCGAAACTCTGGGGTGAGCGCCCTGCTGACGGTGGCTCTGGAGGGGGTGCGTGACCCCACCCAGCTGCAGATGGTGGAGTTTGGCCGAGGATTCGGCTACAAGCTTCCTCTCAGCATCGGCATGCAGAGCGTCGGCAGCGCCATCCTCAAACAGATCGAAGCGATATCAGATAGGGAGTGCTGCAACGTCATGTGCAAATGTTCGGGACATGAAGGCATCCCTGGCCTTTGGGGCCCCCCGGGGTTAAAGGGTTCGCCTGGACAGACGGGCCAGCCGGGTTTCCCGGGAGACGAGGGAGCTCCTGGTGAGCGAGGGGCGCCTGGACCCATCGGACCGCCGGGCATCGAGGGCTGTCCCGGAACCAGAGGACAAAAGGGCTACAGAGGAGTCTCGGGCAACAGGGGGGAGAACGGAGAAAACGGACTGGACGGAATCGACGGAGAGCAGGGACTGACGGGAACAGATGGAGCTAAAGGACCGAGAGGAGACCCAGGAAACCCAGGTATCCCGGGTatcagaggggagggggggctgaAAGGAGAGCGAGGACTCAGAGGAGATCCGGGGGAACCGGGGGCTGATAACACCGCCAGAGGACCCAAAGGAGAGCGCGGCTACCCAGGTTTACCGGGTTCCCCTGGACGGGACGAAGGGCCAGGTGATAAAGGAGACCCTGGAAACACGGGTCCAGATGGAAGAAGAGGCTCCGGGGGAGGGAAGgGTGAACCGGGAACAAAGGGAGAGCCAGGACTTCCAGGCAGCCCAGGAGCCGCTGGTCCACAGGGACGCAGGGGAGGAAACGGAGACCGCGGACCGAAAGGAATCTCTGGCTTCCCTGGACCTCAGGGTGGACCGGGACCAGCTGGAGACCCGGGACAACCTGGACGTCGCGGTGCTAACAGACAGAAGGGCCAACCAGGAGACCCGGGTGTTAAGGGGAGTACGGGACCAGTGGGACCGATAGGACCGCCGggtcAGGATGGCCAAGACGGTTATGGAACTAAAGGATCCAAAGGTGTTAAGGGAGATCCTGGTTTCCCTGGTTACCCTGGTCTAGACGGTGAGGACGGTGTGAAAGGAACCAAAGGATACCCCGGACGTAAAGGGAACTATGGCCGAGGGGGGAACTCAGGGCGGCCGGGAAAGCCAGGCGAGGCTGGAGAACCGGGATATGACGGACACAGGGGTGCCAAAGGTCCACCTGGAACCCCAGCCATGAGTGAGTGCCAGATGATCAGCTACATCAGAGACAACTGTGCATGTTGCCAAGGTGAATCAAGGTGCCCGGTCTACCCCACCGAGCTGGTGTTTGGTCTGGACATGTCGCAGGACGTGACCCCTGCAGCCTTTGAGAGGCAGCGCTCCGCCCTCCTCTCCCTGCTGGACGACATCACCATCTCTGAGAGCAACTGTCCGTCTGGTGCTCGCGTCGCCGTGGTGGCTTACAGCGCCTACACCAAGTACATGATCCGCTTCCAGGACTACCAGCGCAAGCCTCAGCTGATCGAAGCTGTGAAGAACATCGCCCTGGAGAGGACGTCCATCAGGCGCAATCTGGGGGCCGCCATGCGCTTTGTGGGTCAGAACGTCTTCAAACGTGTTCGTAAAGGACTGATGATGAGGAAGGTGGCAGTCTTCTTCTCCAGTGGGCCGTCAGAGGATAATTCAGACATTGTCACCGCCATGATGGAGTACCGAGCCCTCAAAATCGTCCCAGTGGTCATCTCTCTGCGAGGCGCTCCGGAAGTTGAACGAGCGATAAAGGTCGACGACACAGGAAACTCTTTGTTCACCGTGCTGGGGAGGGACGTGGCTGCTGACCTGCTGAAGGTCAAGAACTGTGCAATCTGTTACGaCCCCTGTAGGCATTCAGAGTTGTGCCCCTCGATCGAGGACATCCCGACACCTCAACAAGTCAACGTGGACCTGGTTCTGGTGCTGGACGGCTCCAGGGAGATGCAGGCCGATGAGTACGCCGGCGGCCCGCTGGGCTCTGTGGTGGAACATCTGGCCGTGAGCCCACAGCCCCCGAGAGCGCGGCGGCCGGCCCGGGTGGCTGTAATCCAGAGCGGTACCAAAGATCCCAAGCTGGAGTTTGGCCTGGGGACGTACCAGAGCAGCACGCTGATGCGGAGGCACCTGATGAGGAACATGACCCGGCGGGGCGGCTCCTCGGCGCTGGGAAAGACGCTGGACTTCACCCTGAAGGAGGTGCTGAAGGCCGGCCAGACCCGGAGGAGGAGGGCGGTGCTGGCCGTGGTGGGCACCAAGACGGCCTCCTGGGACCAAGCTAGGCTGGACTGGATCTCCTCTAGAGCCTACTGTGACGGGGTGGCACTGTTTGTGGTGACGGTGGGCAAGCGCTACGATCGGGAGCAGGTGGAGGATCTGGCCGGTCGGCCCGTAGCGCAGCACCTGATCCACCTGGACAGACTGAAGGCCGACGAGCAGAGCTACGCCCAGCGCTTCTTCAGAGTCTTCCTCTCCGCCCTCAGCAAGGGAATAAATGCGTATCCTCGTCCATCATTTAAAGAAGACTGCAACAGGCTGAAGGAACCAGACGATGCGCCGGCCTGGGAACATGACGATTCACTGATCTTCGATAGGGACAATGGTCAGGGGTCGGCAATGCTGGCCGACGAGTTTGTGGAGGAGGTCGAGGAGAAGTTTCGGGTGCAGACAACACAGCTGGATGTCATCGCCAGTGTGACCCCAGGGGACGGCCAGAGTTTCCTCTCAGGACTGAACCTCAGcgGTGCAGACACCCTGACGAAGCCGGAGCCGACCAGCTACGTCTCTAAAGaaatcgagactcatcagaccaggcaacatgtttccagtcttcaactgtccaattttgATGCAGACACCCCTGAGGAAGCCGGAGCCGACCAACCAGACACCTGTCTCCTGCGCCCGGACGCCGGCGGCTGCCAGAACTACACCATAAGATGGTACTTTGACAGCGATCAGGGGCGATGCTCTCGCTTCTGGTACGGCGGCTGCGACGGCAACGGAAACCGTTTCAACACCCTGACTGAGTGCCAGAGCCTCTGTGTGACGAAGAGTCAATTAgtgggaagaagaggaggaagaggaaaaagaggaggcgCCGGTGTGAGACAACATCGCCTGGACCGAATGAAGAAAACGGTTGCGTTGCACTGAACACGAAGCGGGATAAAATACATGCAAGCTGAGTCTGCTCTGGGATGTTTAAactgaaacacatcagggaAAGTTTAAACTGTTCCAAAGCGTTTCCAAAGCCTGTCtacggagagcctgttcactccctatttagccccattgtaccgaatttggttgcagttccaccagagtttcACTGGGGGTGATCACGGTCTAATGCAAAATGTATGGGAGTctacagtggggagaacaagtatttgatacactgccgattttgcaggttttcccacttacaaagcatgtagaagtctgtaatttttatcataggcactcttca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105962 False 1740 TUCP 0.61 23 37107983 37206266
XM_039806349.1 True 8277 mRNA 0.53 44 37088824 37235129

Neighbor

gene id symbol gene type direction distance location
col6a4a NA coding downstream 62073 36928064 ~ 37026751 (-)
LOC120563048 NA coding downstream 236756 36841501 ~ 36852068 (-)
LOC120562455 NA coding downstream 529360 36552444 ~ 36559464 (-)
LOC120563179 npr1,olgc2 coding downstream 771116 36192330 ~ 36317708 (-)
LOC120563092 NA coding downstream 998332 36075620 ~ 36090492 (-)
LOC120562575 NA coding upstream 14232 37249361 ~ 37315604 (-)
rpp25l NA coding upstream 289372 37524501 ~ 37529217 (-)
LOC120562909 NA coding upstream 297836 37532965 ~ 37553789 (-)
LOC120562466 NA coding upstream 357631 37592760 ~ 37599647 (-)
LOC120561711 NA coding upstream 394578 37629707 ~ 37632079 (-)
G79200 NA non-coding downstream 44455 37004550 ~ 37044369 (-)
G79201 NA non-coding downstream 48379 37009366 ~ 37040445 (-)
G79202 NA non-coding downstream 69081 37019249 ~ 37019743 (-)
G79197 NA non-coding downstream 74087 36968666 ~ 37014737 (-)
G79199 NA non-coding downstream 94548 36993788 ~ 36994276 (-)
G79213 NA non-coding upstream 102333 37337462 ~ 37338405 (-)
G79216 NA non-coding upstream 110772 37345901 ~ 37370583 (-)
G79218 NA non-coding upstream 113391 37348520 ~ 37374675 (-)
G79223 NA non-coding upstream 157217 37392346 ~ 37393853 (-)
G79224 NA non-coding upstream 158998 37394127 ~ 37394511 (-)
kiaa0319 LOC103370079 other downstream 194186 36867667 ~ 36894638 (-)
LOC120563186 LOC103369286,LOC103131393,LOC106962355,LOC106910391 other downstream 340586 36664542 ~ 36748238 (-)
creb3l4 NA other downstream 729244 36339081 ~ 36359580 (-)
G79034 dek,LOC100692760,LOC101471355,LOC102210945,LOC102312342 other downstream 983149 36102997 ~ 36105675 (-)
G78733 LOC104935873 other downstream 1062282 36024731 ~ 36026542 (-)
LOC120561551 NA other upstream 257671 37492800 ~ 37519394 (-)
LOC120562472 NA other upstream 508955 37744084 ~ 37796766 (-)
LOC120562474 NA other upstream 723320 37958449 ~ 37971348 (-)
G79484 NA other upstream 828569 38063698 ~ 38221760 (-)
LOC120562477 NA other upstream 905340 38140469 ~ 38205182 (-)

Expression


Co-expression Network