G79309


Basic Information

Item Value
gene id G79309
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37795660 ~ 37872187 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106178
gtctgtgtgtgtctgtctctgtgtgtgtgtgtgtgtctgtctgtctctgtgtgtgtgtctgtctctctgtgtgtgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtctgtctgtctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctg
>TU106179
gtctgtgtgtgtctgtctctgtgtgtgtgtgtgtgtctgtctgtctctgtgtgtgtgtctgtctctctgtgtgtgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtctgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtgtgtgtgtgtgtgtctgtctgtgtgtgtctgtctctgtgtgtgtgtgtgtgtggtgtgtgttgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctgtctcttgtgtctctgttgtgtttgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtatgtgtctgtgtgtgtgtgtgtgtgtctgtgtatatgtgtatgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
>TU106180
gtctgtgtgtgtctgtctctgtgtgtgtgtgtgtgtctgtctgtctctgtgtgtgtgtctgtctctctgtgtgtgtgtgtgtgtgtgtgtgtctgtctctgtgtatgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgagtttctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
>TU106181
gtctgtgtgtgtctgtctctgtgtgtgtgtgtgtgtctgtctgtctctgtgtgtgtgtctgtctctctgtgtgtgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtctgtctgtctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtctctctctgtgtctctgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106178 False 227 lncRNA 0.50 3 37795660 37796216
TU106179 True 563 lncRNA 0.49 5 37795660 37872187
TU106180 False 242 lncRNA 0.49 3 37795660 37799078
TU106181 False 263 lncRNA 0.50 4 37795660 37798563

Neighbor

gene id symbol gene type direction distance location
zgc:153896 LOC100708450,LOC103364589,LOC101166003,LOC106527367 coding upstream 53194 37734725 ~ 37742466 (+)
LOC120561575 NA coding upstream 75631 37717368 ~ 37720029 (+)
LOC120562469 NA coding upstream 85699 37706105 ~ 37709961 (+)
LOC120561715 NA coding upstream 209522 37583123 ~ 37586138 (+)
LOC120562465 NA coding upstream 215805 37578597 ~ 37579855 (+)
LOC120563002 NA coding downstream 385016 38257203 ~ 38259035 (+)
LOC120562479 LOC104959728,LOC104960595,LOC106675582 coding downstream 396090 38268277 ~ 38270068 (+)
LOC120563007 NA coding downstream 415550 38287737 ~ 38291323 (+)
si:dkey-7j14.6 NA coding downstream 530965 38403152 ~ 38428485 (+)
tg NA coding downstream 653017 38525204 ~ 38575568 (+)
G79305 NA non-coding upstream 20324 37772240 ~ 37775336 (+)
G79297 NA non-coding upstream 35486 37759235 ~ 37760174 (+)
G79262 NA non-coding upstream 150093 37607185 ~ 37645567 (+)
LOC120562911 NA non-coding upstream 234874 37556675 ~ 37560786 (+)
G79011 NA non-coding upstream 252115 37542905 ~ 37543545 (+)
G79317 NA non-coding downstream 3548 37875735 ~ 37876077 (+)
G79322 NA non-coding downstream 70707 37942894 ~ 37943374 (+)
G79337 NA non-coding downstream 185920 38058107 ~ 38058421 (+)
G79285 NA non-coding downstream 191510 38063697 ~ 38221749 (+)
G79338 NA non-coding downstream 192162 38064349 ~ 38065198 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other upstream 245058 37530690 ~ 37550602 (+)
G78989 NA other upstream 362981 37431171 ~ 37432679 (+)
G78888 NA other upstream 855706 36839222 ~ 36939954 (+)
LOC120562457 NA other upstream 1091667 36685936 ~ 36703993 (+)
LOC120562456 dennd4b other upstream 1125631 36580965 ~ 36670029 (+)
cmtm7 cmtm7 other downstream 6729 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 184229 38056416 ~ 38145804 (+)
G79351 NA other downstream 297867 38170054 ~ 38324620 (+)
LOC120562476 NA other downstream 309963 38182150 ~ 38188763 (+)
LOC120562481 NA other downstream 429238 38301425 ~ 38305892 (+)

Expression


Co-expression Network