cmtm7 (cmtm7)


Basic Information

Item Value
gene id cmtm7
gene name cmtm7
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37878916 ~ 37888006 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106195
CCGACGGCCGATCGCTAACTAACGTTATCCCAGTCGACGGTGCCGCTGTGTAGCAGTTTAAcccgtgttgttttttttattttaacattgtaaACATCATATATTTCTCTATATTTCAACATGTCGCACACCGTCATCACCACGACGACAACAACCAGGACGTCCGCGGACGGCGTCCTGAACACGGGCTACACCCGCACCATCCCGGGACTGCTGAAGATCGGGCAGATGCTGGCGCTGCTCGTGGCCTTCCTGTGCGTGCACTGCGTATTCGGCTGGCCCAACTGGGCGGCCATGCAGTTCTTCGAGGTGGTGGTGCTGTGGTTCCTCATCGCCTTCCTCATCTTCTtcctcatgcacctgttcaggCTGCAGGCCAGGATGCCCTGCATCAACTGGCCGCTGACGGTGAGTCGGAACACCTTTccacagcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgtgtgtgttgtgtgtgtgtgtgtgtgtg
>XM_039804778.1
GTCGGCGTGTTTATCCGCTTTGCCTTGACACGGGTGTGACGCGCCATCCCGACGGCCGATCGCTAACTAACGTTATCCCAGTCGACGGTGCCGCTGTGTAGCAGTTTAAcccgtgttgttttttttattttaacattgtaaACATCATATATTTCTCTATATTTCAACATGTCGCACACCGTCATCACCACGACGACAACAACCAGGACGTCCGCGGACGGCGTCCTGAACACGGGCTACACCCGCACCATCCCGGGACTGCTGAAGATCGGGCAGATGCTGGCGCTGCTCGTGGCCTTCCTGTGCGTGCACTGCGTATTCGGCTGGCCCAACTGGGCGGCCATGCAGTTCTTCGAGGTGGTGGTGCTGTGGTTCCTCATCGCCTTCCTCATCTTCTtcctcatgcacctgttcaggCTGCAGGCCAGGATGCCCTGCATCAACTGGCCGCTGACGgtgtTTGGGTTCATAGCAACGTTCCTGATGGCTGTCAGTTTGTGGACGTCTTACAGCGTGACCTGCGGCTCTCATCAGACCGgtGCAGCAGTTTAATCAACGCCAGACGGTTGCGTTGGCAGTTTGTTGAGTCCTGCTGCTGTCAAGTTTTCTGCCTAGCAACCGCCTAGCAACCTCCTGGATACTCAACCCTGATTGGATAATAATTTAAACTCCCGACGTAATGGAACATGTGCTCCAGGACCAGCCGCCATTTTCAACAGTCTGAAACGTAAATATCATCCCGGTAAAGGACAGTAGTTACTCAGATTACTTTTCCCTCCGTAGATTTCTACACGTTAAAGGTGCTCAGTAACATTTCAGTAGAATCAGCGAAAGACATCGCTGTGGAAATAATCCAAAATCTCAACAGCTTTCTGTCCTGCCTTTCCCTCTTTGAAAAGGTAGacatcttatttttttacttcccctgtcactacccgatgtcgAGTGCAGACgcgagttgcgcatgcgtcactttgcgacaagtagcctatggttttgagctaacgttagcaatcaaacaatcatagatagctaaaactagtgccctatatttaggGCACTAGTTAAAACGTTAGCTAAGATGCTAAcggtgttttgagctaacgttggCAATCAAGTAGTCTCTtagatgctaacggcattttgagctaacgttagcaatcaagtagcctactagatgctaacggtgttttgagctaacattagcaatcta

Function

symbol description
cmtm7 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human CMTM7 (CKLF like MARVEL transmembrane domain containing 7).

NR:

description
PREDICTED: CKLF-like MARVEL transmembrane domain-containing protein 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106195 False 524 TUCP 0.55 2 37878964 37883950
XM_039804778.1 True 1213 mRNA 0.49 4 37878916 37888006

Neighbor

gene id symbol gene type direction distance location
LOC120561705 NA coding upstream 33202 37826889 ~ 37845714 (+)
zgc:153896 LOC100708450,LOC103364589,LOC101166003,LOC106527367 coding upstream 136450 37734725 ~ 37742466 (+)
LOC120561575 NA coding upstream 158887 37717368 ~ 37720029 (+)
LOC120562469 NA coding upstream 168955 37706105 ~ 37709961 (+)
LOC120561715 NA coding upstream 292778 37583123 ~ 37586138 (+)
LOC120563002 NA coding downstream 369197 38257203 ~ 38259035 (+)
LOC120562479 LOC104959728,LOC104960595,LOC106675582 coding downstream 380271 38268277 ~ 38270068 (+)
LOC120563007 NA coding downstream 399731 38287737 ~ 38291323 (+)
si:dkey-7j14.6 NA coding downstream 515146 38403152 ~ 38428485 (+)
tg NA coding downstream 637198 38525204 ~ 38575568 (+)
G79317 NA non-coding upstream 2839 37875735 ~ 37876077 (+)
G79309 NA non-coding upstream 6729 37795660 ~ 37872187 (+)
G79284 NA non-coding upstream 81714 37733208 ~ 37797202 (+)
G79305 NA non-coding upstream 103580 37772240 ~ 37775336 (+)
G79297 NA non-coding upstream 118742 37759235 ~ 37760174 (+)
G79322 NA non-coding downstream 54888 37942894 ~ 37943374 (+)
G79337 NA non-coding downstream 170101 38058107 ~ 38058421 (+)
G79285 NA non-coding downstream 175691 38063697 ~ 38221749 (+)
G79338 NA non-coding downstream 176343 38064349 ~ 38065198 (+)
G79286 NA non-coding downstream 238795 38126801 ~ 38128972 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other upstream 328314 37530690 ~ 37550602 (+)
G78989 NA other upstream 446237 37431171 ~ 37432679 (+)
G78888 NA other upstream 938962 36839222 ~ 36939954 (+)
LOC120562457 NA other upstream 1174923 36685936 ~ 36703993 (+)
LOC120562456 dennd4b other upstream 1208887 36580965 ~ 36670029 (+)
nek11 nek11,LOC102796711 other downstream 168410 38056416 ~ 38145804 (+)
G79351 NA other downstream 282048 38170054 ~ 38324620 (+)
LOC120562476 NA other downstream 294144 38182150 ~ 38188763 (+)
LOC120562481 NA other downstream 413419 38301425 ~ 38305892 (+)
cmtm6 NA other downstream 545968 38433974 ~ 38455559 (+)

Expression


Co-expression Network