nek11 (nek11,LOC102796711)


Basic Information

Item Value
gene id nek11
gene name nek11,LOC102796711
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38056416 ~ 38145804 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106210
GGAGAAGGGAGCAAACAGTTTTTGACCGTGCAACATGTTTTCACGGCTGCCGCAGTCTCCATGGAAACGGGATCAAACACGGAAGTCGTCCCTGAGTCTGCTGCAGGGGAGCTGACGGGATGCCCAGGTTTCAGGAGCTGGAGTCAGGCCAGGCCCCGCCCCCTGGCGCCGGCGGCCTGGTTGCTAAGCGATACAGCATCCTGCGGAGTCTGGGCCGGGGCAGTTTTGGGTCCGTTTACCTGGTTCGGGACAACAGAGCTTCAGACGGAGAGCAGCTGAAGGTGTTGAAGCAGATTCCTGTGGGCGACCTGCGCCCGGACGAGACGGTGCGAGCGACCCAGGAGGCCCAGCTGCTGTCCCAGCTGCACCACCCGGCCATCCTCTCCTTCTACCACAGCTTCCTGGAGCGGGACGCCTTCTGCATCGTCACCGAGTTCTGCCAGG
>TU106224
ttgtgtgcctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtggtgtgtgtgtgtgtgtgtgtctgtggttgttgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtctgtgtgtgtctctgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtttgtgtgtgtgtctgtgtgtgtgtctgtgtgttcagatATCCCAGAGGACCCTCAGGCTGCAGAAGTTTATTACAACCAGGACGGATTTGATTCGTGTTCAGAGGACGAAGAGACGACAACACCTGCAGAGACACTCTACCTGTCGGACCCACAGGTCAGTGAGCTGGAGGCCATGATGAAGCACATGCAGAAAGTTCTGGAAGAGGAGCTGAGCGGAGACCCAGAGGAGCCGGAGGCCCCTCAGGGGCCCTCGGTGATCCACAGCAGCCTGCTGCAGACCAGAATCCAACACCTGAGAGAGT
>XM_039806188.1
GGAGAAGGGAGCAAACAGTTTTTGACCGTGCAACATGTTTTCACGGCTGCCGCAGTCTCCATGGAAACGGGATCAAACACGGAAGTCGTCCCTGAGTCTGCTGCAGGGGAGCTGACGGGATGCCCAGGTTTCAGGAGCTGGAGTCAGGCCAGGCCCCGCCCCCTGGCGCCGGCGGCCTGGTTGCTAAGCGATACAGCATCCTGCGGAGTCTGGGCCGGGGCAGTTTTGGGTCCGTTTACCTGGTTCGGGACAACAGAGCTTCAGACGGAGAGCAGCTGAAGGTGTTGAAGCAGATTCCTGTGGGCGACCTGCGCCCGGACGAGACGGTGCGAGCGACCCAGGAGGCCCAGCTGCTGTCCCAGCTGCACCACCCGGCCATCCTCTCCTTCTACCACAGCTTCCTGGAGCGGGACGCCTTCTGCATCGTCACCGAGTTCTGCCAGGTGTGtctcctctctctctgcaggcgAGTCCTGCACCGAGATCTGAAGGCCAAGAACATCTTCCTGAAACGAAACCTTGTTAAAATCGGTGATTTCGGAGTTTCCTGCCTGCTGATGGGATCATGTGACCTGGCCACCACCTTCACAGGGACGCCGTACTACATGAGCCCCGAGGTGCTGAACCACCAGGGATACGACTCCAAGTCTGACATCTGggctCTGGGCTGCCTGCTCTACGAGATGTGCGTCCTGTCCCACGCCTTCCAGGCTCCCAGCTTCCTGGCGGTGGCGATGAAGATCGTGGAGGGAGAAACGCCGGCGCTGCCCGCTCGCTACTCTGCCGATCTCAACGCCGTCCTGCAGAGGATGCTGCAGAAAGATCCAGCATCCAGACCGTCGGCTGCAGAACTTCTCAAGACCCCCTTCATGGAGGACAACATGAAGAAAATGAAGGACAGGTTTGTGTCGAAAGACGAGAGCAAGAAAGACGCCGAGCTCATCGCCAGGAACATacagaataaaaATCACCTGCAGACGCTGATGGAGAGGTCAGAGGTCGAGCAGATGACGCCCAGAGAGAGAATGAGGCTCCGCAAACTGGAAGCTGCTGACGAGAAGGCAAAGAGactcagGAAACTGGCCGAGGAGAAATACGAAGAGATCCACACCCGCAGGAGGGAACTCAGGAGCcgacattttgaaaaagtcagcCTGGACGTTCTGAACGAGAGCAGAGAGGACGGAGCCTGCCGAAGtcaaccaatcagcatccaGGACCACGGGGGGTCACCAGGAGGTTCGCAGCCAATCCTGATGAAGCAGGAGGACAGCAAGATGTCGGAGTCGGAGGTGCACGatATCCCAGAGGACCCTCAGGCTGCAGAAGTTTATTACAACCAGGACGGATTTGATTCGTGTTCAGAGGACGAAGAGACGACAACACCTGCAGAGACACTCTACCTGTCGGACCCACAGGTCAGTGAGCTGGAGGCCATGATGAAGCACATGCAGAAAGTTCTGGAAGAGGAGCTGAGCGGAGACCCAGAGGAGCCGGAGGCCCCTCAGGGGCCCTCGGTGATCCACAGCAGCCTGCTGCAGACCAGAATCCAACACCTGAGAGAGTGAGTCTCacagaggcttttattttga

Function

symbol description
nek11 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in chromosome segregation; mitotic intra-S DNA damage checkpoint signaling; and regulation of mitotic cell cycle phase transition. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in centrosome; cytoplasm; and nucleoplasm. Orthologous to human NEK11 (NIMA related kinase 11).

NR:

description
PREDICTED: serine/threonine-protein kinase Nek11-like

GO: NA

KEGG:

id description
K20880 NEK11; NIMA (never in mitosis gene a)-related kinase 11

RNA

RNA id representative length rna type GC content exon number start site end site
TU106210 False 444 TUCP 0.63 4 38056416 38077649
TU106224 False 731 TUCP 0.52 5 38087976 38145778
XM_039806188.1 True 1592 mRNA 0.58 17 38056416 38145804

Neighbor

gene id symbol gene type direction distance location
LOC120561705 NA coding upstream 210702 37826889 ~ 37845714 (+)
zgc:153896 LOC100708450,LOC103364589,LOC101166003,LOC106527367 coding upstream 313950 37734725 ~ 37742466 (+)
LOC120561575 NA coding upstream 336387 37717368 ~ 37720029 (+)
LOC120562469 NA coding upstream 346455 37706105 ~ 37709961 (+)
LOC120561715 NA coding upstream 470278 37583123 ~ 37586138 (+)
LOC120563002 NA coding downstream 111399 38257203 ~ 38259035 (+)
LOC120562479 LOC104959728,LOC104960595,LOC106675582 coding downstream 122473 38268277 ~ 38270068 (+)
LOC120563007 NA coding downstream 141933 38287737 ~ 38291323 (+)
si:dkey-7j14.6 NA coding downstream 257348 38403152 ~ 38428485 (+)
tg NA coding downstream 379400 38525204 ~ 38575568 (+)
G79322 NA non-coding upstream 113042 37942894 ~ 37943374 (+)
G79317 NA non-coding upstream 180339 37875735 ~ 37876077 (+)
G79309 NA non-coding upstream 184229 37795660 ~ 37872187 (+)
G79284 NA non-coding upstream 259214 37733208 ~ 37797202 (+)
G79349 NA non-coding downstream 5010 38150814 ~ 38189239 (+)
G79355 NA non-coding downstream 41812 38187616 ~ 38235991 (+)
G79359 NA non-coding downstream 78764 38224568 ~ 38225472 (+)
G79367 NA non-coding downstream 118931 38264735 ~ 38265277 (+)
LOC120563039 NA non-coding downstream 221315 38367119 ~ 38367849 (+)
cmtm7 cmtm7 other upstream 168410 37878916 ~ 37888006 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other upstream 505814 37530690 ~ 37550602 (+)
G78989 NA other upstream 623737 37431171 ~ 37432679 (+)
G78888 NA other upstream 1116462 36839222 ~ 36939954 (+)
LOC120562457 NA other upstream 1352423 36685936 ~ 36703993 (+)
G79351 NA other downstream 24250 38170054 ~ 38324620 (+)
LOC120562476 NA other downstream 36346 38182150 ~ 38188763 (+)
LOC120562481 NA other downstream 155621 38301425 ~ 38305892 (+)
cmtm6 NA other downstream 288170 38433974 ~ 38455559 (+)
LOC120562999 NA other downstream 448241 38594045 ~ 39098913 (+)

Expression


Co-expression Network