LOC120562476


Basic Information

Item Value
gene id LOC120562476
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38182150 ~ 38188763 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106251
AAAACTAAGTTGCCCTTTAGGTAGCTGTGTTTGAGGAACTTTGAGGTTGTCAGTCACacatgttgttgtgtttcctgGCGTGCAGACGGCGAGCTGTTCACCGCCACGACGACCAACTTCAGAGGAGTCGAACCACAGATTTCTCGACACTTCAGCAAAGACGGCCGCCCAGACGTCAGCCAGGACTCGTCGGTCAGCCTACTGGAGGAGCCAACGTTTGTGAGCTCGGCCT
>XM_039806189.1
ACGGCGAGCTGTTCACCGCCACGACGACCAACTTCAGAGGAGTCGAACCACAGATTTCTCGACACTTCAGCAAAGACGGCCGCCCAGACGTCAGCCAGGACTCGTCGGTCAGCCTACTGGAGGAGCCAACGTTTGTGAGCTCGGCCTGGACCTATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106251 True 232 lncRNA 0.54 2 38182150 38188752
XM_039806189.1 False 158 mRNA 0.59 2 38182235 38188763

Neighbor

gene id symbol gene type direction distance location
LOC120561705 NA coding upstream 336436 37826889 ~ 37845714 (+)
zgc:153896 LOC100708450,LOC103364589,LOC101166003,LOC106527367 coding upstream 439684 37734725 ~ 37742466 (+)
LOC120561575 NA coding upstream 462121 37717368 ~ 37720029 (+)
LOC120562469 NA coding upstream 472189 37706105 ~ 37709961 (+)
LOC120561715 NA coding upstream 596012 37583123 ~ 37586138 (+)
LOC120563002 NA coding downstream 68440 38257203 ~ 38259035 (+)
LOC120562479 LOC104959728,LOC104960595,LOC106675582 coding downstream 79514 38268277 ~ 38270068 (+)
LOC120563007 NA coding downstream 98974 38287737 ~ 38291323 (+)
si:dkey-7j14.6 NA coding downstream 214389 38403152 ~ 38428485 (+)
tg NA coding downstream 336441 38525204 ~ 38575568 (+)
G79286 NA non-coding upstream 53178 38126801 ~ 38128972 (+)
G79338 NA non-coding upstream 116952 38064349 ~ 38065198 (+)
G79337 NA non-coding upstream 123729 38058107 ~ 38058421 (+)
G79322 NA non-coding upstream 238776 37942894 ~ 37943374 (+)
G79317 NA non-coding upstream 306073 37875735 ~ 37876077 (+)
G79359 NA non-coding downstream 35805 38224568 ~ 38225472 (+)
G79367 NA non-coding downstream 75972 38264735 ~ 38265277 (+)
LOC120563039 NA non-coding downstream 178356 38367119 ~ 38367849 (+)
G79384 NA non-coding downstream 185064 38373827 ~ 38379212 (+)
G79386 NA non-coding downstream 191829 38380592 ~ 38380881 (+)
nek11 nek11,LOC102796711 other upstream 36346 38056416 ~ 38145804 (+)
cmtm7 cmtm7 other upstream 294144 37878916 ~ 37888006 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other upstream 631548 37530690 ~ 37550602 (+)
G78989 NA other upstream 749471 37431171 ~ 37432679 (+)
G78888 NA other upstream 1242196 36839222 ~ 36939954 (+)
LOC120562481 NA other downstream 112662 38301425 ~ 38305892 (+)
cmtm6 NA other downstream 245211 38433974 ~ 38455559 (+)
LOC120562999 NA other downstream 405282 38594045 ~ 39098913 (+)
G79605 NA other downstream 477509 38666272 ~ 38673012 (+)
cpne4a cpne4,LOC107379031,LOC103372348,LOC102220834,LOC108412597 other downstream 487973 38676736 ~ 38780360 (+)

Expression


Co-expression Network