G79370


Basic Information

Item Value
gene id G79370
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38405477 ~ 38412407 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106275
TTTGTGGTCTCTGCTCTCTGGCCGTGGCGGCAGCGAGACGGACCTCGGTGGCACTGGTGCGTGCGTGCCTGGCGTGGAACGTGTTGAGCGTGGCGGTTGGTCTGGGGGGCGTGGCCTATCTCTGCTGGCTGCTCGCTGACAGATCAGCTGACCGCTCCACCTCTCAGCTCATCTGTGACGACCTCCTCCAGTCAGGGTGCTGGCCTGTGCACCCACAGTTACAGCAAATGACGAAGACCTGCTACGAACAGATGAGGTGGCTGGATGTGAGTGTTTATGGACCTCTGGGCGCCCTGCTGGTTCTGCTCCTGCAGGTCTGTGTCGTCGTCACCGTCTGCGTGTTCTCCTGCAGAGCTCTCGCACGCCGCCACAGCTCCACCCCCATCAtgGTGGAGGTCGGTGACCGCGGCGCTCTGCTGTCCGGCAGCGACGTCTCTCTGCTGGGCAGCGAAGGAGAGGAAGCGTCCACGCTGCCTCCCAAGTCCCCGTGAGAGGGAAAACTACAGTAATCCTACAGCAGAGAGTACTCGCATACTGGGACTCGGCCTGTCATTGTAATCTGTAATCGTCTCTCCAgctgtttctctctttcatctGTTGTTAACAATCGTTTTCATGCTGCGCTGCATTCTGGGTCGTTTGGGGGCTTCACCTGCCCAAAGTTGGGACTGAGTTTAAAGGTGGAACAGATAATACTCTAGTGTTTATTTCAACAAGTGTAATTGTAGGCTACGTGACCACTGTCAGCGTCAAATCCACACTTTCACATTCAACTGTCTAtgggagcagccgtgcaatgcattctgtgAGCATCGTGTttcccgctcctcatttgcatgacgttgaatccagccaactttatgcaaatgaggagcggccggctcggctcgccgcctctcaaaatctgacggaaatcttttaaactgaccgttgtcaaatgtgtgtgtctctgtctgtgtgtgtgtgtgtgtgagtgtgtgtgtgtccacgtgtctgtgtgtccctTGAAATAATGTGACtatagccctattcgcacgggataagtattacctggtgacctccagtcatttgtaataatcgcggaggttgtctgtgatcttaatcccgtgtgaatcggtcatgtctgtaatttgtaaagtaataattgccccgcaaatgacctaccatatttcgccgataatattagtcccgtgcgaatcggcatctctgtgatttggggtctaactggctgcgttgtcaattataaatgaaaagttttgacatcatatccgggggataatgtctgtaaatttgagtaaaatacagacttcagttatcccgtgtgaatgcgccagacgaaatacagacgtgtgggggtaatttctaaactacaagaggtccccaggtaatacttatcccgtgcgaatagggcttatgtatgaaaatgtgtgtaattccTAAACCCTTGCTCCAATTTTGATGTAAATACGGGCAAAATAAAGCTGAAAGTCTGCACTACAATTTCTTTTCAAATCCATTGTGTTAGTGCACAGGGCCAAAATCATGAAAATTGTGTCACTGTCCAAAATATTTCCGAACCTAACTGTATGTAtgctaagccaatctcctgtctaaaaTACTTCTCATATGTCTTGGGagtca
>TU106276
TTTGTGGTCTCTGCTCTCTGGCCGTGGCGGCAGCGAGACGGACCTCGGTGGCACTGGTGCGTGCGTGCCTGGCGTGGAACGTGTTGAGCGTGGCGGTTGGTCTGGGGGGCGTGGCCTATCTCTGCTGGCTGCTCGCTGACAGATCAGCTGACCGCTCCACCTCTCAGCTCATCTGTGACGACCTCCTCCAGTCAGGGTGCTGGCCTGTGCACCCACAGTTACAGCAAATGACGAAGACCTGCTACGAACAGATGAGGTGGCTGGATGTGAGTGTTTATGGACCTCTGGGCGCCCTGCTGGTTCTGCTCCTGCAGGTCTGTGTCGTCGTCACCGTCTGCGTGTTCTCCTGCAGAGCTCTCGCACGCCGCCACAGCTCCACCCCCATCAtgGTGGAGGTCGGTGACCGCGGCGCTCTGCTGTCCGGCAGCGACGTCTCTCTGCTGGGCAGCGAAGGAGAGGAAGCGTCCACGCTGCCTCCCAAGTCCCCGTGAGAGGGAAAACTACAGTAATCCTACAGCAGAGAGTACTCGCATACTGGGACTCGGCCTGTCATTGTAATCTGTAATCGTCTCTCCAgctgtttctctctttcatctGTTGTTAACAATCGTTTTCATGCTGCGCTGCATTCTGGGTCGTTTGGGGGCTTCACCTGCCCAAAGTTGGGACTGAGTTTAAAGGTGGAACAGATAATACTCTAGTGTTTATTTCAACAAGTGTAATTGTAGGCTACGTGACCACTGTCAGCGTCAAATCCACACTTTCACATTCAACTGTCTAtgggagcagccgtgcaatgcattctgtgAGCATCGTGTttcccgctcctcatttgcatgacgttgaatccagccaactttatgcaaatgaggagcggccggctcggctcgccgcctctcaaaatctgacggaaatcttttaaactgaccgttgtcaaatgtgtgtgtctctgtctgtgtgtgtgtgtgtgtgagtgtgtgtgtgtccacgtgtctgtgtgtccctTGAAATAATGTGACtatagccctattcgcacgggataagtattacctggtgacctccagtcatttgtaataatcgcggaggttgtctgtgatcttaatcccgtgtgaatcggtcatgtctgtaatttgtaaagtaataattgccccgcaaatgacctaccatatttcgccgataatattagtcccgtgcgaatcggcatctctgtgatttggggtctaactggctgcgttgtcaattataaatgaaaagttttgacatcatatccgggggataatgtctgtaaatttgagtaaaatacagacttcagttatcccgtgtgaatgcgccagacgaaatacagacgtgtgggggtaatttctaaactacaagaggtccccaggtaatacttatcccgtgcgaatagggcttatgtatgaaaatgtgtgtaattccTAAACCCTTGCTCCAATTTTGATGTAAATACGGGCAAAATAAAGCTGAAAGTCTGCACTACAATTTCTTTTCAAATCCATTGTGTTAGTGCACAGGGCCAAAATCATGAAAATTGTGTCACTGTCCAAAATATTTCCGAACCTAACTGTATGTAtgctaagccaatctcctgtctaaaaTACTTCTCATATGTCTTGGGagtcaaactgtgaagaaataaacattataactttTGACAAAATATCTAAATTTTTTCCAAAACAGTCCAACGCTTTTGCCCTCATGACATTCACTAATGTTATGAACCGGGCTGTAATGTAGCCCTACAGGTAAGATATTCAGCatcagtcagcgtccactaaaagttctgttgttgccgctgacttattattagattattattctaagtgtctgacaacattatggaaaggatccctaaagagatagaccttttagttaaagagtaagatccttttagtttaacatgaaacagccccgaaatcaccatcaccaaactccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagtgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagtgtgtatagagccagcatatctccaccagactccatggaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgttcatagagccagcatattttcaccagactccatgtaaataatcaggacttttatcatcgtaaaacacacttcattcaaagtggacagaaactaaataaaactatcaataGATAGacctggctctatacacgctaaaagtcctgcttatttacatggagtctggtggagatatgctggctctatacacgctaaaagtagtgtgtgtgtgtgtgtcagtctgccTCCTACTCCCTGATCCTgtttctttaaataataaagGGAAGTGTTTGGATTCTTGGAAATTATGTTGTGGAGAGATAAACACGATGTGTTTAAGTGTAATCAGAGTAAACATAATCTAGTGGGCACTACTGACTTAACCcgtcaaaatgacaaaatgttgaATGTATGATTTTGTCAGAATATTGTTTAAGTTTTTgtaatttaaagctgcagtttTAACCTTAAAACCACAGTTTGGTTGTGGCATTTCATGTAAGATTtccttgtgtctctgtctcttttatgtgtaaataaagttaagtatgtatttttttaaatgttttatttattttgttgcttAAATGGCACACAGTTAATCGATTATTGCTGCTATATCATACACATAATAAAGCTTGT

Function

GO:

id name namespace
GO:0009072 aromatic amino acid family metabolic process biological_process

KEGG:

id description
ko00360 Phenylalanine metabolism
ko00130 Ubiquinone and other terpenoid-quinone biosynthesis
ko04610 Complement and coagulation cascades
ko05133 Pertussis
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU106275 False 1641 lncRNA 0.49 4 38405477 38411096
TU106276 True 2952 lncRNA 0.44 4 38405477 38412407

Neighbor

gene id symbol gene type direction distance location
LOC120563007 NA coding upstream 114154 38287737 ~ 38291323 (+)
LOC120562479 LOC104959728,LOC104960595,LOC106675582 coding upstream 135409 38268277 ~ 38270068 (+)
LOC120563002 NA coding upstream 146442 38257203 ~ 38259035 (+)
LOC120561705 NA coding upstream 559763 37826889 ~ 37845714 (+)
zgc:153896 LOC100708450,LOC103364589,LOC101166003,LOC106527367 coding upstream 663011 37734725 ~ 37742466 (+)
tg NA coding downstream 112797 38525204 ~ 38575568 (+)
LOC120563014 NA coding downstream 169111 38581518 ~ 38592495 (+)
plin6 NA coding downstream 471883 38884290 ~ 38903260 (+)
LOC120563021 NA coding downstream 582746 38995153 ~ 39009576 (+)
LOC120563022 NA coding downstream 608403 39020810 ~ 39030834 (+)
G79386 NA non-coding upstream 24596 38380592 ~ 38380881 (+)
G79384 NA non-coding upstream 26265 38373827 ~ 38379212 (+)
LOC120563039 NA non-coding upstream 37628 38367119 ~ 38367849 (+)
G79367 NA non-coding upstream 140200 38264735 ~ 38265277 (+)
G79359 NA non-coding upstream 180005 38224568 ~ 38225472 (+)
G79392 NA non-coding downstream 40739 38453146 ~ 38453826 (+)
G79373 NA non-coding downstream 44236 38456643 ~ 38521817 (+)
G79568 NA non-coding downstream 143659 38556066 ~ 38556285 (+)
LOC120563037 NA non-coding downstream 198852 38611259 ~ 38611869 (+)
LOC120563036 NA non-coding downstream 230141 38642548 ~ 38647914 (+)
G79351 NA other upstream 80857 38170054 ~ 38324620 (+)
LOC120562481 NA other upstream 99585 38301425 ~ 38305892 (+)
LOC120562476 NA other upstream 216714 38182150 ~ 38188763 (+)
nek11 nek11,LOC102796711 other upstream 259673 38056416 ~ 38145804 (+)
cmtm7 cmtm7 other upstream 517471 37878916 ~ 37888006 (+)
cmtm6 NA other downstream 21567 38433974 ~ 38455559 (+)
LOC120562999 NA other downstream 181638 38594045 ~ 39098913 (+)
G79605 NA other downstream 253865 38666272 ~ 38673012 (+)
cpne4a cpne4,LOC107379031,LOC103372348,LOC102220834,LOC108412597 other downstream 264329 38676736 ~ 38780360 (+)
G79615 NA other downstream 279239 38691646 ~ 38711009 (+)

Expression


Co-expression Network