LOC120562481


Basic Information

Item Value
gene id LOC120562481
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38301425 ~ 38305892 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106280
GTCCCTAAGTACGCCTATTGTGACGGGAGCGTTGGACAGACATTAAGTTGTTTGCGCTCTAAACTGTATCGacatttttggtgattttgagttaaaaataaGTGTGAAACGTCTGTCTAAATAAGCTCTACAACATAcccagaaactgggggaaatcgAAGTATTGACACGGAGCTATTGAAGGCAACCCTCCAGGAGACACGACGAGGCAATGAACAGAGGCAGAAATAGAAAGAAGAAATGAAGGATGAAAAGAGGAGAAGATACCTCACAGTCCAGGAGAAATGAAGGATGAAAAGAGGAGAAGATACCTCACAGTCCAGGAGAAATGAAGGATGAAAAGAGGAGAAGATACCTCACAGTCCAGGAGAAATGAAGGATGAAAAGAGGAGAAGATACCTCACAGTCCAGGTGGAGAAGGGCGGAGTTAGACGGGCTGTCAGAGGAGTCCTCAACAGGTCAGCGGGGCGCTCTGACCTCGGCGGCTGGAGGAAGTTCAGAGGTCACCTGTTGGAGGAGGGGCGGAGCCTGCTGCCGTTTGGTCTGGGGCTGCTGATGGCGTCCGTGTACGGAGCCACGGCTCTCTTCCTGCAGAACCAGCCTCTGTGGCTGTGCGTCTACACCACGCTGACTCTGGCCGCGCTGGCCGCCTTCGGCATGGGACTGTCGGCCGGCGTCCGCGCCAACGTCTCCGTGCTGATGCCCACGCTCTGCTCAGGTCA
>XM_039806193.1
CGTTGGACAGACATTAAGTTGTTTGCGCTCTAAACTGTATCGacatttttggtgattttgagttaaaaataaGTGTGAAACGTCTGTCTAAATAAGCTCTACAACATAcccagaaactgggggaaatcgAAGTATTGACACGGAGCTATTGAAGGTAACATCCGCGAAAACCGACGAATGTCAAATATTAAACTATCTTCACCCCGGtcagtccacaaaccaacgggcttgctagcgttagctaaaaGTTAGCTTTCCAAAAAGTCTAAGAACAGAAGCTGGTAAAGATTAAACTCACTGCTGTGGGGAGCCGAAGATCTGCGGCGGTCAGAGAGAGCCATCATCATCCATCCAAAGTCTTCTATCAACAAGCTTTCAGCAACCCTCCAGGAGACACGACGAGGCAATGAACAGAGGCAGAAATAGAAAGAAGAAATGAAGGATGAAAAGAGGAGAAGATACCTCACAGTCCAGGAGAAATGAAGGATGAAAAGAGGAGAAGATACCTCACAGTCCAGGAGAAATGAAGGATGAAAAGAGGAGAAGATACCTCACAGTCCAGGAGAAATGAAGGATGAAAAGAGGAGAAGATACCTCACAGTCCAGGTGGAGAAGGGCGGAGTTAGACGGGCTGTCAGAGGAGTCCTCAACAGGTCAGCGGGGCGCTCTGACCTCGGCGGCTGGAGGAAGTTCAGAGGTCACCTGTTGGAGGAGGGGCGGAGCCTGCTGCCGTTTGGTCTGGGGCTGCTGATGGCGTCCGTGTACGGAGCCACGGCTCTCTTCCTGCAGAACCAGCCTCTGTGGCTGTGCGTCTACACCACGCTGACTCTGGCCGCGCTGGCCGCCTTCGGCATGGGACTGTCGGCCGGCGTCCGCGCCAACGTCTCCGTGCTGATGCCCACGCTCTGCTCAGCCTTCGCTAagttcctcctcttcctgtttGTGTCGCTGCTGCTCACCGGTCCTCTCAGCAAATCTTTAGGAAAACACGGAGGAAAGCCCAGTTGTAGTTTGCTTGGCAGCCAATCAAACGCAAGAGCTGATGCGtgccTGACTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106280 False 722 TUCP 0.53 3 38301425 38303688
XM_039806193.1 True 1059 mRNA 0.51 5 38301454 38305892

Neighbor

gene id symbol gene type direction distance location
LOC120563007 NA coding upstream 10102 38287737 ~ 38291323 (+)
LOC120562479 LOC104959728,LOC104960595,LOC106675582 coding upstream 31357 38268277 ~ 38270068 (+)
LOC120563002 NA coding upstream 42390 38257203 ~ 38259035 (+)
LOC120561705 NA coding upstream 455711 37826889 ~ 37845714 (+)
zgc:153896 LOC100708450,LOC103364589,LOC101166003,LOC106527367 coding upstream 558959 37734725 ~ 37742466 (+)
si:dkey-7j14.6 NA coding downstream 97260 38403152 ~ 38428485 (+)
tg NA coding downstream 219312 38525204 ~ 38575568 (+)
LOC120563014 NA coding downstream 275626 38581518 ~ 38592495 (+)
plin6 NA coding downstream 578398 38884290 ~ 38903260 (+)
LOC120563021 NA coding downstream 689261 38995153 ~ 39009576 (+)
G79367 NA non-coding upstream 36148 38264735 ~ 38265277 (+)
G79355 NA non-coding upstream 65434 38187616 ~ 38235991 (+)
G79359 NA non-coding upstream 75953 38224568 ~ 38225472 (+)
G79285 NA non-coding upstream 79676 38063697 ~ 38221749 (+)
G79349 NA non-coding upstream 112186 38150814 ~ 38189239 (+)
LOC120563039 NA non-coding downstream 61227 38367119 ~ 38367849 (+)
G79384 NA non-coding downstream 67935 38373827 ~ 38379212 (+)
G79386 NA non-coding downstream 74700 38380592 ~ 38380881 (+)
G79374 NA non-coding downstream 99219 38405111 ~ 38459995 (+)
G79370 NA non-coding downstream 99585 38405477 ~ 38412407 (+)
LOC120562476 NA other upstream 112662 38182150 ~ 38188763 (+)
nek11 nek11,LOC102796711 other upstream 155621 38056416 ~ 38145804 (+)
cmtm7 cmtm7 other upstream 413419 37878916 ~ 37888006 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other upstream 750823 37530690 ~ 37550602 (+)
G78989 NA other upstream 868746 37431171 ~ 37432679 (+)
cmtm6 NA other downstream 128082 38433974 ~ 38455559 (+)
LOC120562999 NA other downstream 288153 38594045 ~ 39098913 (+)
G79605 NA other downstream 360380 38666272 ~ 38673012 (+)
cpne4a cpne4,LOC107379031,LOC103372348,LOC102220834,LOC108412597 other downstream 370844 38676736 ~ 38780360 (+)
G79615 NA other downstream 385754 38691646 ~ 38711009 (+)

Expression


Co-expression Network