LOC120562474


Basic Information

Item Value
gene id LOC120562474
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37958449 ~ 37971348 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106409
TTTCAAATatggaaaagtggaaattgtAAAAACCTTTTTGGCTGTTTGGCGTCTATAAGAGATTCAAAGAGCCTATGCCTAACCCTAAAAGTCATTatgaggaagtgacatcatcctAATTACAGGAAGTAGGTGCAGCGTCTCTCGACTAAAGCACTATTTTAGAAACAGTTCTGAGCatcagaacgagagagagaagaagcagagacacagagaagcaCGATGGAAGAGTTCAAATGgatcaaaatgtctttatttctgaTACCGCTGCTTCACTTTACAGCAGCAGCTGGAAACCATTTCCTCTCCTCCACTGTCAGAGCTGGAGATGATGTCACTTTGCCTTGTGAACATGTGATAGACGGTCAGAGAAAGTGTGACAGTACTACCTGGATCTTCAGTCGTTCAGGAAACACAGTGACGCTGTTTGAAGATGGGCAGATTAAAGAAGAAGCCAGAGTTAAATCAGACAGACTGAGTGTTAGAGAGAACTGTTCTCTGGTTATAAAGAAGGTCACAGAGGAGGATGCTGGTCGTTACACCTGCAGACAGTTCAGATCAGGACAACATCAAGGTCCAGATACTCTGGTTGATCTCTC
>XM_039806186.1
TAAAGCACTATTTTAGAAACAGTTCTGAGCatcagaacgagagagagaagaagcagagacacagagaagcaCGATGGAAGAGTTCAAATGgatcaaaatgtctttatttctgaTACCGCTGCTTCACTTTACAGCAGCAGCTGGAAACCATTTCCTCTCCTCCACTGTCAGAGCTGGAGATGATGTCACTTTGCCTTGTGAACATGTGATAGACGGTCAGAGAAAGTGTGACAGTACTACCTGGATCTTCAGTCGTTCAGGAAACACAGTGACGCTGTTTGAAGATGGGCAGATTAAAGAAGAAGCCAGAGTTAAATCAGACAGACTGAGTGTTAGAGAGAACTGTTCTCTGGTTATAAAGAAGGTCACAGAGGAGGATGCTGGTCGTTACACCTGCAGACAGTTCAGATCAGGACAACATCAAGGTCCAGATACTCTGGTTGATCTCTCTGTTACCACGACTGAACAGAAGAACACTAATGAGGAGAAAGCAGGTAAggacacaataacaacaaaaccaacaacaacaacagcagcagcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaactgaaaGCAGCATTAAATCAGGAACCAATGATGCTTCACCAAAACGACAAGATATGTCGGTGTACATCATCGTGGCTCTGGTTTTGGTAGCACTCCTAATAATCGTGGCTGTCATCAGTTGGAAGAAAATGAAAGGAAACACAACACGGAGGAACGACAATGTTGGGCTGACCTCAAACTCTGCAGCAACTCAGTCTGCTCCAGAAACCAATCAGGACACGGCTGATCCTGAAGGTGGTGTTTCCTACGCCTCCATCAGATACACCAAGAAGACCAACAGAGCCCAGGTTCAGCgtaaaaatgatgatgatgcatTGACCTACGCAACCGTGAAAGCTTCCTCCGCTGATCCCAGTGACCTCTACGCTACCATCTACTAATCTGTCTAATCTGTCATCAGATATTTGCTAATCTCTGTTAATGTTCATGATCATTTTCATGATGGATTACTGTAAACAGCTTCCTATTCAGAAGGGCGTGTAGTAGGTTAACTAGTGTTGCAATGTAGAAAGGGGAAGTAGTAGTTCAAAATGTATATATGTGGTgcttaaaatgtaaatgagcAAAACATATACATTTTGCTTGATGAACTTTATTGTGCTGAGTGATGGATGTGCTAATCTTAGGCTATAGTTCAAGGttaataagattttttttgtcttatacTACATATATTGCCTGTAAATATTTTATATGCAACAATTTATCAAGGGCAAGCAATTTTACTGATTTTCTCATGTTcttaattttcacatttttttctgtgtagTTTCATCTGTTATTGTTTCATATGCAATAATGCATTTATGTCTCCTTTTATCAAAATATTCAAAGCATCCTGAAAAGGGGAGGATGTGAAATTACTTATTAAACAACTGAATAAGTGAAAATTGGAAATTCAAATGTAAATTTGATTCAAATCAATTGGAAATGAGCAATAAGGAAGTTAAGCACTTAAGAGTGAGAGACAATGAAAAAGGATGAAAGTCACTATGAGGAAGTGACACCTTACTGATCACAGaaagtagtaataataataataataataaattgaatttatatagcgcttttcatggactcatgTAGTAGCATGAATTTCTCTCTAGAAATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106409 False 599 TUCP 0.43 2 37970487 37971348
XM_039806186.1 True 1699 mRNA 0.39 9 37958449 37971199

Neighbor

gene id symbol gene type direction distance location
si:dkey-11p23.7 NA coding downstream 103627 37851161 ~ 37854822 (-)
mrps12 mrps12 coding downstream 228383 37725589 ~ 37730066 (-)
LOC120562468 NA coding downstream 263043 37693717 ~ 37695406 (-)
LOC120562948 NA coding downstream 272836 37682235 ~ 37685613 (-)
LOC120562949 NA coding downstream 283436 37672821 ~ 37675013 (-)
LOC120563013 NA coding upstream 240472 38211820 ~ 38230481 (-)
dcst1 NA coding upstream 258210 38229558 ~ 38250551 (-)
LOC120563006 NA coding upstream 353934 38325282 ~ 38327753 (-)
LOC120563000 NA coding upstream 364136 38335484 ~ 38337715 (-)
LOC120563004 NA coding upstream 372730 38344078 ~ 38346701 (-)
LOC120562672 NA non-coding downstream 47324 37905582 ~ 37911125 (-)
G79463 NA non-coding downstream 58465 37891935 ~ 37899984 (-)
G79448 NA non-coding downstream 92402 37826824 ~ 37866047 (-)
G79443 NA non-coding downstream 126891 37779364 ~ 37831558 (-)
G79433 NA non-coding downstream 160504 37796816 ~ 37797945 (-)
G79478 NA non-coding upstream 53249 38024597 ~ 38024811 (-)
G79479 NA non-coding upstream 62865 38034213 ~ 38034851 (-)
LOC120563195 NA non-coding upstream 74647 38045995 ~ 38050535 (-)
G79483 NA non-coding upstream 86764 38058112 ~ 38058431 (-)
G79486 NA non-coding upstream 110383 38081731 ~ 38087507 (-)
LOC120562472 NA other downstream 161683 37744084 ~ 37796766 (-)
LOC120561551 NA other downstream 439055 37492800 ~ 37519394 (-)
LOC120562574 NA other downstream 723320 37088824 ~ 37235129 (-)
kiaa0319 LOC103370079 other downstream 1063811 36867667 ~ 36894638 (-)
LOC120563186 LOC103369286,LOC103131393,LOC106962355,LOC106910391 other downstream 1210211 36664542 ~ 36748238 (-)
G79484 NA other upstream 92350 38063698 ~ 38221760 (-)
LOC120562477 NA other upstream 169121 38140469 ~ 38205182 (-)
LOC120562482 NA other upstream 347596 38318944 ~ 38324284 (-)
LOC120562485 NA other upstream 545253 38516601 ~ 38522389 (-)
nudt17 nudt17 other upstream 694919 38666267 ~ 38680480 (-)

Expression


Co-expression Network