G79518


Basic Information

Item Value
gene id G79518
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38287741 ~ 38292299 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106505
TGAAGACAGGAAGAAAATactttgttcatgttagtttattcatcatgtaaagcttcagtttgttcacacatcccatcagtaaagtctgttcaaagaCTCTTGTTCAATGATTTCATCAACAGATTCACTTCATCCACACAGAACCAGAATCTCAGCTATGTAAAAGAGAAGAATGACTaattgattatgattatgataacaACATTTTGGTCCaccaaacaaataaatgtaaatctaGATTTCTTTACAGATGTCCACAAAGAGAACAAAGTGTGTAGGATAAAGGAGGTCTGgtgctttctctcttcagagccatgcagtggaagagaaactaaatacacttttagtttgatttgatttctgtGTCGCACCAAACATTTGGCCcgtcccacatgggattacaagacaccgcTATTTAACAGACATCTTCCTGTCCCGCAGATACAGAACGtgtagaaatacatgaataacaaacaACAGCTAATATCTACAGATCATCTCGGTAAAGATCTTTTTTAACATGTCGTCATGTTTCAACAATCAaaggtaaaataacagatttcaaCTGAGCACATTGAGAGCTTCTGGGGCTCCCCGAATGGTTTtctcaacaaacaaaaaacatctaATCACTTCTAAAATGCCAATACaagagacaaaaacgtcaaactaATTTACAAAAACGTTGATAAAAGCAAATCAATGgcaaatgttgcaaaaaaaaaaataagaaaaatacttGACACATGGAAAACCCtcaaaaacactgacaaaaaatgtttaaaagtggccgggttgggtcagtgggtagagcaggcgcacatatactgagaggtttaagccttgacgcagaggtctagggttccctctctctcactctcccctttctcacctagctgttctaccaaaataaaggcagaaaaggccCAAAAAGtatcatgaaaaaaaataaaatgtcacaacaatcagctctcagcaacaaacatggagaatAAATAAGTCAAagagttaaaacacagaatataacccttaaatgacttctgtctatttcagtttacacaactcagcagaggcTCCATACGAACAATAAACCATTAGTCCAGCATATagcggctgagtgaatgtggtctggactctgtggaggagagtcatggtttcagagacgctgtagaaggacagaatacctgcactgtgatccaggtacactcctactctggaggaccaAGGACCTGAGACGGGAGTTTGGACATTGTtggacaaaaatatatatttgttgttgtaacAATGTAACGCCCAAGATTTGTCATTGAATCCAAATCCACATTCACCTGACCCCCCTGCTCTCctgatattcttgtatgcgactgctacaGAAACTTCTCTattcctctccacctcccagtaccaacgtccagtcagactctctctactcaggacctgatACATTTtagtgaatctgtctgggtgactagaataagaCTGACGTTGTCTCATTAATGTTGCTTTCCTGTTCTCCTCAGATAACAACAGccgtgtgtgtgctgtgtttggatccagtgttatttcacgtgaatattttaagaatccagctctggtcttgggctctggttgtgGCAGTAAAACGTCCACTTCAGTCCCTGTCATTGAGACGTTTGTCCACTTCTCTCTCAGGacgtcctgtagtttatctctgacttctgacacggCTGCTGTCACGTTctcaaagcagctcagaggacGGATAGGGATGCTGGAtgttgattggctgagtggtgacagtgaggggtagttgtgtagaaactggttgagatcctctgtgtgtgagagcttctccagctcagcgtctttcctcttcagctcagtgatctcctgctccagcttctcctgaagctctttgactcgactcacttcacttttctgctgggatctgacctgctgcttcacatcagagcttcttttctccaggagacggatcagctcagtgaagatcttcttgctgtcctccactgctttatcagcagagagatcgatggcctccgcctgctgttgaagcagcttcacatctttctctctgtcctggattctctgctggatggtctgtcgactcccctcgagctctctctgcctctcagctctctctgctgcagctgagactatgtcgtggcctttatgttcctccattaagcagagataacagataagctgctgatcagtacggcagaaaatcttcatcacctcatcatgacgagagcagacgttctcctggagcttcttggacggctccaccagcttgtgtttcttgaaTGTCTCTGATTCATAATGAGGCTGAAGGTGTAGCTCACAATAAGAAGCCAGACATTGCAGACAGGACTTGTGtgctttgagttttctcccggtgcagacatcacaggccacatcttcagctccagcatagcagtgatcagcaggagcagcttggagttcagtcttcttcagctcctccactaaatctgctaacatggtgcttttcagcaggacaggcctcTGTGTGAAAGTCTTCCTGCACTCAGGGCAGCTGTAGCTGTCCTTATGATCCTCTTTATCccagtggcttttaatacagttcatgcagtagctgtgtccacagggagtagtcaccggatccttcagtagatccagacagatggaacaagagaaggtttcCCAGTTCAGCTGAACTTctttctgcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106505 True 2708 lncRNA 0.44 2 38287741 38292299

Neighbor

gene id symbol gene type direction distance location
dcst1 NA coding downstream 37190 38229558 ~ 38250551 (-)
LOC120563013 NA coding downstream 57260 38211820 ~ 38230481 (-)
si:dkey-11p23.7 NA coding downstream 432919 37851161 ~ 37854822 (-)
mrps12 mrps12 coding downstream 557675 37725589 ~ 37730066 (-)
LOC120562468 NA coding downstream 592335 37693717 ~ 37695406 (-)
LOC120563006 NA coding upstream 32983 38325282 ~ 38327753 (-)
LOC120563000 NA coding upstream 43185 38335484 ~ 38337715 (-)
LOC120563004 NA coding upstream 51779 38344078 ~ 38346701 (-)
LOC120563012 NA coding upstream 83363 38375662 ~ 38387184 (-)
LOC120563005 NA coding upstream 179847 38472146 ~ 38474560 (-)
G79510 NA non-coding downstream 32703 38250106 ~ 38255038 (-)
G79507 NA non-coding downstream 61653 38222718 ~ 38226088 (-)
G79495 NA non-coding downstream 138401 38148610 ~ 38149340 (-)
G79496 NA non-coding downstream 157720 38129554 ~ 38130021 (-)
G79492 NA non-coding downstream 175114 38109919 ~ 38112627 (-)
LOC120563025 NA non-coding upstream 25104 38317403 ~ 38317847 (-)
LOC120563026 NA non-coding upstream 25836 38318135 ~ 38318638 (-)
G79544 NA non-coding upstream 112128 38404427 ~ 38417922 (-)
G79545 NA non-coding upstream 112562 38404861 ~ 38416578 (-)
G79534 NA non-coding upstream 117545 38409844 ~ 38455753 (-)
G79484 NA other downstream 65981 38063698 ~ 38221760 (-)
LOC120562477 NA other downstream 82559 38140469 ~ 38205182 (-)
LOC120562474 NA other downstream 316393 37958449 ~ 37971348 (-)
LOC120562472 NA other downstream 490975 37744084 ~ 37796766 (-)
LOC120561551 NA other downstream 768347 37492800 ~ 37519394 (-)
LOC120562482 NA other upstream 26645 38318944 ~ 38324284 (-)
LOC120562485 NA other upstream 224302 38516601 ~ 38522389 (-)
nudt17 nudt17 other upstream 373968 38666267 ~ 38680480 (-)
G79767 NA other upstream 614481 38906780 ~ 38908021 (-)
G79820 NA other upstream 805473 39097772 ~ 39138382 (-)

Expression


Co-expression Network