LOC120563015


Basic Information

Item Value
gene id LOC120563015
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39312639 ~ 39346432 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106586
gattggttgattgcatgttacgcccaaaacacacctctgattaatgaagacactaaggacaaccctttagaaccaggcgcccggcgcacggagcCATTTTTACCAcagtcaaactagcaaaagtggatttggacacgccctgaacacacctgcaccatGCGCTACACAGTGTTCTCAGCAGGTGGTTTTAaacgaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctcaggttACCTGGAGGGTCTTACCTGTCTCACCTGCTGGGTCTGTCGTCAGTCAGCTGTCTGTTCTGTGGCGAGGCGCTGAGACCAGAGGACGACAACACGACAGCCTGTGATGTCCCCCGGTGTCCAGGCGTGTACTGTCGGCCCTGTTTCCTCAGTTTGGGAAACACGTGTGTCGTCTGCGCGCGACCTCTGACCTTCCAGGAAGACGGCGAGGAGGAGCGGGACTCCAGCGATGACGAGCAGCTGAACCCGATTCACATCGCAGACACACCACTGATGAAGAGGAGAGacgagggagacagagacagcagagagagagacgagggagagagagacagcagagagagagacagcagagagagagacagcagactGGACTCTGACTCTGAGCTCAGTGAAGCAGACATGTCGTACCAGGACACAGCCGGGTCGGACGACAGCCAGGACTCCTTCTACTCCTCCAGAGGCCTCCAAACCGTCATCGTACACGGACCGGACGAGCCCCCAAAACCTCCAGGATCCTGATCCAAAAACCATCTGCTGCTTTCAGCACAAAGGTCACTTTGTAATTAAAGTTATTAAGCATGAAATGAAATCGTGAAATCTGGTTTATTATAAAGCAGAAAGACAGAACCAACAAGTCCTCTAAACCTTATGAGGATATAGGtagtttattttacattttcaaggAAAAAGTGGTTCCCTCTAACCCCTCCCACAGGAGAGTtctccgtcctcatatctaaaccatgtggttaacgttgtgaaatggtcccagtttggttaggttaagacaccaaaactactgaGTTAAATTGGtaaaaagatggaggtttgggttcaaatcggacgtgacttcacttcctgaaggtgaCGGAGCTCCGTTTGGTccctaaagtaaaaaaaaaaactctgtttccttttctcggtctcctgggggaaagtcctgtgtttgtttgaaacacacacagagacacacacacacacacagagacacacacaaacacacacaaacaaacacacacagacacacacacacacagacacacacaaacacacacagacacacacacacacacacacacacacacacacacacacacacagaggagtgTACTGACGTGGGGTGATGTAGGTCTTGGGGGTTTTCTAATCTTGTCCAAACTTTTTCATGATAGCTTTACTACTGCCCAAGTGAAAgaaatcagt
>XM_039807026.1
ACCTAACACTGACGAGGGTTagggtgtgtgtggttgttcATCAGGAGAGGATCTGGTTCCTCCGGCAGCAGATCCTGGATCAGAGGCGGGCGGAGGGGAGAGCGCTAAGAACgactgcaggaggaggaggaggaggaggaggaggaggaggagggagtcgCCTTCAAACTCTCCTGCTGAGgttACCTGGAGGGTCTTACCTGTCTCACCTGCTGGGTCTGTCGTCAGTCAGCTGTCTGTTCTGTGGCGAGGCGCTGAGACCAGAGGACGACAACACGACAGCCTGTGATGTCCCCCGGTGTCCAGGCGTGTACTGTCGGCCCTGTTTCCTCAGTTTGGGAAACACGTGTGTCGTCTGCGCGCGACCTCTGACCTTCCAGGAAGACGGCGAGGAGGAGCGGGACTCCAGCGATGACGAGCAGCTGAACCCGATTCACATCGCAGACACACCACTGATGAAGAGGAGAGacgagggagacagagacagcagagagagagacgagggagagagagacagcagagagagagacagcagagagagagacagcagactGGACTCTGACTCTGAGCTCAGAGCTTGTGTTTTCCCACGCTGCCTGCTGTCAGTGAAGCAGACATGTCGTACCAGGACACAGCCGGGTCGGACGACAGCCAGGACTCCTTCTACTCCTCCAGAGGCCTCCAAACCGTCATCGTACACGGACCGGACGAGCCCCCAAAACCTCCAGGATCCTGATCCAAAAACCATCTGCTGCTTTCAGCACAAAGGAGCTCTGGGTCAAAGAGTGAACTATCCAGATCCTGTTTGTGGTATAAAAGGATCGACCGTCACCCTCCCCTGCTCCTTCACACCGCTGGAGTCTGCCAAGATCATCAGAGTCGTCTGGTGCAAGAACCATGAAATCTGTCAGAGAACGACTCCGTCTGTGTACGACAGCgaatcaaacaacaacaaccctcgTTACAGATACCTGGGAGACCAGAAGGGAAACTGCACTTTACAGATCTCAGATCTACAGGAGGATGACAAcgcaacttttcgcttcagaaTGGAAGCTAATGATCCCGGAGCATCTTTTACTGGCCAATCAGGAGTGAGAGTCACAGTCGTAGATCAGATGGAGATAAGAAGCTCCAGAGATGTTGGAGAGTttaaaagaggagaagaagtcACACTGAACTGCACCACAATCTGCTCTATCCACCAACTGGAGGTCAGCTGGTTCAGAGATGGCTCCGCCCTCTCAGAGACTGGCCCCGCCCTCCATCTCAGCGATCTGACTGCAAAGGATTCTGGGAACTACACCTGTGGTTTGAAGAAGAACAAGCTCACCCTCTCAGAGCCGTACAGCCTGCATGTGGAGGCTGACCAGGAAGGAGGAGGTCGGCCTCTGATCGCTGGTCTGGTGGTCGGGGTCCTGCTGGTTCTCTTCGCTGTTGTTCTGGTCGTCTACATCAGCAAAAGGAAGAGAGCAGCAGGTCGGGATCAGACAGCCGTGGGACGGGACGAGGAACAAAAGCACTCTGATAACATCTACAGCAACGACTTCTTGCCGCTTGCTGAGCAGCAGGGACccagcagcgctgtggaggaagtcagCTACGCCTCGGTCCAGTTCACACACAAGAAGCAGGCCAGACCGGCAGAGGAGACGGAGGCCTCCATCATCTACAGCGCTGTAGCCAGAACAGGCTGAAGACAAACCACACCATGATGGcagatcatgttttttttgtaattttaaattacattttttatataattatcTTTTTATGAGTAAATTTCACATCAATTGACAAGTACAAATGGAATTACAGTTGTTAACATCAGAATTCTACAGAACCAAAGGTTTTGTATCAATAGTTTATTTTTCCAGATGTCCAATGTCCATTCCCTTTTTAataatatgtatacatatatatcagtTTGGCATCATTCAGTTGTGTTCACATCACTGAGGTACATTGGGAAACCCAAAAAAGTAGAAATCAGATAAAAAGTGGACGTTCCTTCAGCTCGTTACCTTGACAAAATCTGGTCTTAAAGGTCTGATGAATTGTACCCATTTTTCCCAGTGTTTTATGAATACGTCTAACTTTAGGTTGAGAGAAACAGTAACCTTTTCCatagtatatatatctatatatatatattgtcacATCTACCCAATTATTAATTGTAGGTCCAGTCTGCAACATCCATCTTTTAGTTAGGGCCTTTTTTCCTGCTGCCAGTTCTGGGGGGATATACCCTAAGTACATGATTTTGAAATCAaatggtgtatgtgtgttaaaaACATCTTGTATTGCTTTATGTATATCTTTCCTGTAACTTTGTATGTTTGGACATTCCCAGAACACATGGTAATGACCTGCAGCCTGACATCCACAATTACGCTGGGAATTACCATTACTTTGATATACCTTCATGAGTGGAGTGATGAAATATTGAGCTACATTTTTCCAGCAAAATTCCTTCCATGCATGGGATTTTGTAGTTTTCCATTGTAATACACAGATGTCCTCCCATTCATTGTCCATTATTGTTTGTCCTCCTTCCCATTCCCATTTGTCCTGTATGTATTTTGTTGAGGAAGTTTTCTGAATTTGGAGACTCTCCTTTATAGTTTAATGTTTGATTTATATGCATCAATAAATAGCTGGACAAAGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106586 False 1532 TUCP 0.49 4 39313989 39321325
XM_039807026.1 True 2673 mRNA 0.48 11 39312639 39346432

Neighbor

gene id symbol gene type direction distance location
LOC120562489 NA coding upstream 34136 39265833 ~ 39278503 (+)
LOC120563022 NA coding upstream 281805 39020810 ~ 39030834 (+)
LOC120563021 NA coding upstream 303063 38995153 ~ 39009576 (+)
plin6 NA coding upstream 409379 38884290 ~ 38903260 (+)
LOC120563014 NA coding upstream 720144 38581518 ~ 38592495 (+)
LOC120563011 syt11,LOC102778393 coding downstream 45516 39391948 ~ 39419673 (+)
LOC120563008 NA coding downstream 78896 39425328 ~ 39427120 (+)
LOC120562494 LOC108250191,LOC103388058,LOC101480860,LOC107095276 coding downstream 434804 39781236 ~ 39803887 (+)
LOC120562359 NA coding downstream 465423 39811855 ~ 39828704 (+)
LOC120562496 LOC103369586 coding downstream 577893 39924325 ~ 39979365 (+)
G79689 NA non-coding upstream 4900 39230944 ~ 39307739 (+)
G79587 NA non-coding upstream 11251 39300168 ~ 39301388 (+)
G79592 NA non-coding upstream 80420 39229871 ~ 39232219 (+)
G79686 NA non-coding upstream 117647 39193980 ~ 39194992 (+)
G79685 NA non-coding upstream 119017 39191434 ~ 39193622 (+)
LOC120563033 NA non-coding downstream 13042 39359474 ~ 39360686 (+)
G79710 NA non-coding downstream 33856 39380288 ~ 39381667 (+)
G79573 NA non-coding downstream 35604 39382036 ~ 39424898 (+)
LOC120563028 NA non-coding downstream 39114 39385546 ~ 39388207 (+)
G79714 NA non-coding downstream 52223 39398655 ~ 39399287 (+)
dcst2 NA other upstream 6552 39302039 ~ 39306087 (+)
LOC120562999 NA other upstream 213726 38594045 ~ 39098913 (+)
cpne4a cpne4,LOC107379031,LOC103372348,LOC102220834,LOC108412597 other upstream 532279 38676736 ~ 38780360 (+)
G79615 NA other upstream 601630 38691646 ~ 38711009 (+)
G79605 NA other upstream 639627 38666272 ~ 38673012 (+)
G79713 NA other downstream 87029 39433461 ~ 39454292 (+)
G79722 LOC100712425 other downstream 114016 39460448 ~ 39463841 (+)
LOC120562364 LOC108234077 other downstream 418741 39765173 ~ 39771420 (+)
LOC120562498 LOC103369894 other downstream 944550 40290982 ~ 40345060 (+)
G80003 NA other downstream 970307 40316739 ~ 40321067 (+)

Expression


Co-expression Network