LOC120563019


Basic Information

Item Value
gene id LOC120563019
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39321432 ~ 39331516 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106591
ACTCTCAGCaggaacagtgtgtgtgtgtgtgtgtgtgtgaggggaggACTCTCAGCaggaacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagggggagGACTCTCAGCaggaacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtataggGGGAGGACTCTCAGCaggaacagtgtgtgtgtgtgcagcctcTCCCTCTCACTCGGTCCCTGCTTGTTGTCTCTGTCGGACTCTCTGTGACTTTTCAAGTTTTTTGGCGACCAAAGCTAGGTAAGCTCAGCTGTGGACTGATTgatcatagtgtgtgtgtgtgtgtggagaaaatGAGTTGTTGAAAATCTGAAGAGCAAAATTCAGAGGCAAAAAAAATCAGATATATAATTTCAATGCATAAATATTCAGAATGCAAGAAATGaaatggctttttaatttcaaaatccgATGAAACAGATTTACTTCCATAGCAGTTATTAGTCTGAATGCATTCCTACAATGTCCCTAAATCCACATTTAGGTCCTGTTTCTGCTGTAAAAACAGGAAACTGTTGGGCAGGTCTGTTAGTGGAGGACGTTCTGTCACAACCAAAAACActtattataaaaacaaaaggctTAATAATTGTCATTTCATGTAATGATGACATTAAAGATGACATTAAAAGGGACACATATAACTCTGTTTTATGTTTCACTTTATTTGTGCATTCAACATGTTTTCATGTCAAATCTTCCAGATCTTTCATCTATAATCTaaccagcctgttctcatgaaccaaaTGTCCAAAATTTAAGCTCTATAAGTCGTATGAGTTCCacattttgttgttgctgtcatCACCACGCTGACTGCTGCTCTATAAGAACGTGGCTGCAGTTGAGTttaattcaactttatttatagtatcaaatcataacaagagttatttcaggacactttacagatagagtaggtctagaccacactctatcatttacaaagacaaaaattccagtaattcccccaagagcaagcatttagtgccacagtggcgaggaaaaactcccttttaggaagaaacctgggacagacccaggctcttggtaggaggtgtctgatggtgccggttgggggtctgatgaacagtggcaataatagtcacaataaagataatggatcagtgactataGTAGTAGATCAgtgaaatagtagttgtagtagttcatggtgtagcaggacactgcagggcgTGGAAGGGAGTAGCAGAGCATCGAGCAGGACcgaggtgccaccctaatcaaAGGAAAACTGCGTGaagagaaaacataaggactctggggaataaGCTCTGAACCGACTTATTTCATCTTttcggtgcctaaacttaacgtTTGTCGCCTCATAACTCTCActctttctttcctaaaccGTAATctcggctcacagtcacctgttcTCAGGTAACTGAACCACACTGATAcaccgagctgtgatggaggtctggggaccgagctgtgatggaggtctgtggaccgagctgtgatggaggtctgtggaccgagctgtgatggaggtctggggaccgagctgtgatggaggtctggggaccgagctgtgatggaggtctcAAAGCTCTGCAGCTGATGTCATGTGACCAGCCGGCCTTCTCCTAGTTCTCTTATGACATCATCTGAACCTGTTAATGAGAATGGGTTGAACCAACAGAGGATTGTTCTCTAAGGGTTAAATGTCAACTTAAAGCTGATG
>XM_039807030.1
GCaggaacagtgtgtgtgtgtgcagcctcTCCCTCTCACTCGGTCCCTGCTTGTTGTCTCTGTCGGACTCTCTGTGACTTTTCAAGTTTTTTGGCGACCAAAGCTAGtcacctgttcTCAGGTAACTGAACCACACTGATAcaccgagctgtgatggaggtctggggACCGAGCTGTGATGGGGGTCTGTagaccgagctgtgatggaggtctggggaccgagctgtgatggaggtctgtagaccgagctgtgatggaggtctcAAAGCTCTGCAGCTGATGTCATGTGACCAGCCGGCCTTCTCCTAGTTCTCTTATGACATCATCTGAACCTGTTAATGAGAATGGGTTGAACCAACAGAGGATTGTTCTCTAAGGGTTAAATGTCAACTTAAAGCTGATGATAGATGTGTGAATGATGTGTtcactaaaaataaaaacgtcTCTTAGTGCAGCTATAACTTTGTGGTTACTAAAacagcagccacacacacatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaccctgtcagatgaactcatCATTCATTCAATACCGCAATTGTTTTCTGGGGTTTTTGCAGCTTTTTTTCAGATATTAGGGAAGTAACAATAAAAGAATACAAAGTTTGTAAGAAAAGAGTTCTCGTAACGGAAGGAAGTCAGAAAGTGGCACCAACAGTTTCTTGACATATGTCCCAACCTTTCTGTCCGTCAGTCAGTTAGCGCTCGGCTCACTCTTCTGTCAGGAGTCCCAACCTGAAGAGACTGAAGTAAGGATGGCAGTTTGGGACAAAAAGATTCTCTGGGCCGTCATGTTGGTCCTGACAGGAGCTCTGGGTCTAAGAGTGAACTATCCAGATCCTGTTTGTGGTATAAAAGGATCGACCGTCACCCTCCCCTGCTCCTTCACACCGCTGGAGTCTGTCAAGATCATCAGAGTCGTCTGGTGCAAGAACCATGAATTCTGTCAGAGAGAGACTCCGTCTGTGTACGACAGCgaatcaaacaacaacaaccctcgTTACAGATACCTGGGAGACCAGAAGGGAGACTGCACTTTACAGATCTCAGATCTACAGGAGGAAGACAAcgcaacttttcgcttcagaaTGGAAACTAATGATCCCATAGCATCTTTTACTGGCCAATCAGGAGTGAGAGTCACAGTAGATCAGATGGAGATAAGAAGCTCCAGAGATGTTGGAGAGTttaaaagaggagaagaagtcACACTGAACTGCACCACAAGCTGCTCTATCCACCAACTGGAGGTCAGCTGGTTCAGAGATGGCTCCGCCCTCTCAGAGACTGGCCCCGCCCTCCATCTCAGCGATCTGACTGCAAAGGATTCTGGGAACTACACCTGTGGCTTGAAGAGGAACAACGGCACCCTCTCAGTGCCGTACAGCCTGCATGTGGAGACTGACCAGGAAGGAGGAGGTCTGCTTCTGATCGTTCGTCTGGTGGTCGGGGTCCTGCTGATTCTATTCGCTGTTGTTCTGGTTGCTTGCGTCAGCAAAAGAACGGAGGAGAAGGTGGAGGACTCCATCATCATCTACAACGCTGTAGACAGCACCATCAGAAGACAAACCACACCATGATGGCAGATCAACTTTTTTAAATCcatgtttacatttaaataaaaaatgaaaaataaaagaaaaggttttaaaattttaaatttgtgtgtgtgtgtgtgtgtgtgtgcatgtgcatatgtttctttgtgtgcatgcttgcgtgtgtgtttgtttgtgtgtctgtgtttgtgcatgtgtgtgtgtgtttgcatgtaatTTGATGAAAAGTTATGATTCAGCTATAATATTATGTTCATTTCTCCTTTAAAAAtatttgacaaaataaaacccACCAGatcttttatttacatttaaaatgaaatgattaaaacttaatttaatgCACTCATTAGATGCACAATTGCTCCGTATTGTTGTCTatggtgtgtgtttatattatattatgccaaagccaaaaacaaatttccattttatgcaaaTCTAATGGACAATAAACTTGATGTACACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106591 False 1779 lncRNA 0.44 2 39321432 39323436
XM_039807030.1 True 2096 mRNA 0.44 7 39321630 39331516

Neighbor

gene id symbol gene type direction distance location
LOC120562489 NA coding upstream 42929 39265833 ~ 39278503 (+)
LOC120563022 NA coding upstream 290598 39020810 ~ 39030834 (+)
LOC120563021 NA coding upstream 311856 38995153 ~ 39009576 (+)
plin6 NA coding upstream 418172 38884290 ~ 38903260 (+)
LOC120563014 NA coding upstream 728937 38581518 ~ 38592495 (+)
LOC120563011 syt11,LOC102778393 coding downstream 60432 39391948 ~ 39419673 (+)
LOC120563008 NA coding downstream 93812 39425328 ~ 39427120 (+)
LOC120562494 LOC108250191,LOC103388058,LOC101480860,LOC107095276 coding downstream 449720 39781236 ~ 39803887 (+)
LOC120562359 NA coding downstream 480339 39811855 ~ 39828704 (+)
LOC120562496 LOC103369586 coding downstream 592809 39924325 ~ 39979365 (+)
G79689 NA non-coding upstream 13693 39230944 ~ 39307739 (+)
G79587 NA non-coding upstream 20044 39300168 ~ 39301388 (+)
G79592 NA non-coding upstream 89213 39229871 ~ 39232219 (+)
G79686 NA non-coding upstream 126440 39193980 ~ 39194992 (+)
G79685 NA non-coding upstream 127810 39191434 ~ 39193622 (+)
LOC120563032 NA non-coding downstream 3835 39335351 ~ 39335951 (+)
LOC120563033 NA non-coding downstream 27958 39359474 ~ 39360686 (+)
G79710 NA non-coding downstream 48772 39380288 ~ 39381667 (+)
G79573 NA non-coding downstream 50520 39382036 ~ 39424898 (+)
LOC120563028 NA non-coding downstream 54030 39385546 ~ 39388207 (+)
dcst2 NA other upstream 15345 39302039 ~ 39306087 (+)
LOC120562999 NA other upstream 222519 38594045 ~ 39098913 (+)
G79713 NA other downstream 101945 39433461 ~ 39454292 (+)
G79722 LOC100712425 other downstream 128932 39460448 ~ 39463841 (+)
LOC120562364 LOC108234077 other downstream 433657 39765173 ~ 39771420 (+)
LOC120562498 LOC103369894 other downstream 959466 40290982 ~ 40345060 (+)
G80003 NA other downstream 985223 40316739 ~ 40321067 (+)

Expression


Co-expression Network