G79710


Basic Information

Item Value
gene id G79710
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39380288 ~ 39381667 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106750
CCTCACACCAGCAAGGCAAGTAGGCTAACAGTTAGGCTAacagttaggctaacgttatcgttagtgtctggctgtctgtatgCCGGGGGAACCtggttttttttggggcttattttaactggcccatccagttttctggaggcccacctacagtcaaaatcctggcgccgcTAGTGGTGCCACATTGATGGTTTCCGCTCCACTATTTCCAGTGCCTGTTTGTGTAACGATGTGATGGGTGTGACTATCGTCTGGGAAGCTCGGCCCCCCCCATACGATAACACAGCAGgatcagtgactacgtttacatgcagccaataacccgttcaaaaccggaatattagcaataacccggtcgcgctcggccatgtaaacaccggcaaaaacccgaatatgctacctgggttaccccttttctaacccgaaattttggccatgtaaacgcgtatcggcatatctccatcacaaggaacattgatttgtgttctgcatgttctattcgcaatgAGTctcggtcttttgagtagaggaacttcttgtatgcgccagaaaacatagttataataataattatttactataataatatagttatatatatatatatatatatatatgtcaatgcagaaaacctgcgcgcagtataccggaagtaaacaggaagtagaggtaaacacatagacagtatataagggtaaacatggcgagacgcagcacagcacagcacttTTGGAGCGAGCAGGAAACCAATGTCTTCAtcagtgtggtgaaaaccatgaatataatgtcttttgttgacggtagaaagtaccgagatagtgagatttataagaaggggacccaaaagttattgcgtcttaaggttgtctgGATATcgccatttgattacaaatgccatgtaggagtaactctctctgctctcgcatgtaaacgggtaattccgaatgtttcagaaacccgaatagtgaccttaacccgaccagaacccgaaaattgacagcttgtaaacgtagtcactgagAGAGTATCATGGCAATGAATGATCTGATTTATTTAGGGTTAAAACACATTTAGGAGACACTCAATAATAGAAGGACATGCAGAAGAAAGCCAGAAACCAATCATAACATGAAGAGAAAAATACTGAACATATCGTCTGggaagtgaagaagaagaagaagaagaagaagaagaagaag
>TU106752
CCTCACACCAGCAAGGCAAGTAGGCTAACAGTTAGGCTAacagttaggctaacgttatcgttagtgtctggctgtctgtatgCCGGGGGAACCtggttttttttggggcttattttaactggcccatccagttttctggaggcccacctacagtcaaaatcctggcgccgcTAGTGGTGCCACATTGATGGTTTCCGCTCCACTATTTCCAGTGCCTGTTTGTGTAACGATGTGATGGGTGTGACTATCGTCTGGGAAGCTCGGCCCCCCCCATACGATAACACAGCAGgatcagtgactacgtttacatgcagccaataacccgttcaaaaccggaatattagcaataacccggtcgcgctcggccatgtaaacaccggcaaaaacccgaatatgctacctgggttaccccttttctaacccgaaattttggccatgtaaacgcgtatcggcatatctccatcacaaggaacattgatttgtgttctgcatgttctattcgcaatgAGTctcggtcttttgagtagaggaacttcttgtatgcgccagaaaacatagttataataataattatttactataataatatagttatatatatatatatatatatatatgtcaatgcagaaaacctgcgcgcagtataccggaagtaaacaggaagtagaggtaaacacatagacagtatataagggtaaacatggcgagacgcagcacagcacagcacttTTGGAGCGAGCAGGAAACCAATGTCTTCAtcagtgtggtgaaaaccatgaatataatgtctttattagtgtggtgataaaccatgaatataatgtctttattagtgtggtgataaaccatgaatataatgtctttattagtgtggtgataaaccatgaatataatgtcttttgttgacggtagaaagtaccgagatagtgagatttataagaaggggacccaaaagttattgcgtcttaaggttgtctgGATATcgccatttgattacaaatgccatgtaggagtaactctctctgctctcgcatgtaaacgggtaattccgaatgtttcagaaacccgaatagtgaccttaacccgaccagaacccgaaaattgacagcttgtaaacgtagtcactgagAGAGTATCATGGCAATGAATGATCTGATTTATTTAGGGTTAAAACACATTTAGGAGACACTCAATAATAGAAGGACATGCAGAAGAAAGCCAGAAACCAATCATAACATGAAGAGAAAAATACTGAACATATCGTCTGg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106750 False 1199 lncRNA 0.42 2 39380288 39381667
TU106752 True 1268 lncRNA 0.41 2 39380288 39381628

Neighbor

gene id symbol gene type direction distance location
LOC120562489 NA coding upstream 101785 39265833 ~ 39278503 (+)
LOC120563022 NA coding upstream 349454 39020810 ~ 39030834 (+)
LOC120563021 NA coding upstream 370712 38995153 ~ 39009576 (+)
plin6 NA coding upstream 477028 38884290 ~ 38903260 (+)
LOC120563014 NA coding upstream 787793 38581518 ~ 38592495 (+)
LOC120563011 syt11,LOC102778393 coding downstream 10281 39391948 ~ 39419673 (+)
LOC120563008 NA coding downstream 43661 39425328 ~ 39427120 (+)
LOC120562494 LOC108250191,LOC103388058,LOC101480860,LOC107095276 coding downstream 399569 39781236 ~ 39803887 (+)
LOC120562359 NA coding downstream 430188 39811855 ~ 39828704 (+)
LOC120562496 LOC103369586 coding downstream 542658 39924325 ~ 39979365 (+)
LOC120563033 NA non-coding upstream 19602 39359474 ~ 39360686 (+)
LOC120563032 NA non-coding upstream 44337 39335351 ~ 39335951 (+)
G79689 NA non-coding upstream 72549 39230944 ~ 39307739 (+)
G79587 NA non-coding upstream 78900 39300168 ~ 39301388 (+)
G79592 NA non-coding upstream 148069 39229871 ~ 39232219 (+)
G79573 NA non-coding downstream 369 39382036 ~ 39424898 (+)
LOC120563028 NA non-coding downstream 3879 39385546 ~ 39388207 (+)
G79714 NA non-coding downstream 16988 39398655 ~ 39399287 (+)
G79717 NA non-coding downstream 50646 39432313 ~ 39433121 (+)
LOC120563031 LOC107095265,LOC103369586 non-coding downstream 94108 39475775 ~ 39479389 (+)
LOC120563015 NA other upstream 33856 39312639 ~ 39346432 (+)
LOC120563019 NA other upstream 48772 39321432 ~ 39331516 (+)
dcst2 NA other upstream 74201 39302039 ~ 39306087 (+)
cpne4a cpne4,LOC107379031,LOC103372348,LOC102220834,LOC108412597 other upstream 599928 38676736 ~ 38780360 (+)
G79615 NA other upstream 669279 38691646 ~ 38711009 (+)
G79713 NA other downstream 51794 39433461 ~ 39454292 (+)
G79722 LOC100712425 other downstream 78781 39460448 ~ 39463841 (+)
LOC120562364 LOC108234077 other downstream 383506 39765173 ~ 39771420 (+)
LOC120562498 LOC103369894 other downstream 909315 40290982 ~ 40345060 (+)
G80003 NA other downstream 935072 40316739 ~ 40321067 (+)

Expression


Co-expression Network