G79728



Basic Information


Item Value
gene id G79728
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38585569 ~ 38617012 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU106781
GGCCAGTAAAAGTTGCTCTGGGATCATTAGTTTCCActctgaagcgaaaagttgtgTCGTCTTCCTCCTGTAGATCTGAGATCTGTAAAGTGCAGTCTCCCTTCTTGTCTCCCAGGTATCTGTAACGAGGGTCGTTGTTCTGTGATTCGCTGTCGTACACAGACGGAGCGTCTCTCCCACAAGCGTTAGGGCCCTTGCACCAGATGACTCTGATCAAAGGTTCTCCTACATCATCAACAACAGATTTCCGTGTGTTGAAGGAGCAGCGGAGGGTGACGGTCGATCCTACCACACCACAAACACGACGTGGATTGTTCACACGTTGACCCAGAGC

Function


GO: NA

KEGG:

id description
ko04145 Phagosome
ko05140 Leishmaniasis

RNA


RNA id representative length rna type GC content exon number start site end site
TU106781 True 334 lncRNA 0.51 3 38585569 38617012

Neighbor


gene id symbol gene type direction distance location
LOC120563017 NA coding downstream 85912 38489974 ~ 38499657 (-)
LOC120562484 NA coding downstream 100704 38482155 ~ 38484865 (-)
LOC120563005 NA coding downstream 111009 38472146 ~ 38474560 (-)
LOC120563012 NA coding downstream 198385 38375662 ~ 38387184 (-)
LOC120563004 NA coding downstream 238868 38344078 ~ 38346701 (-)
trim33l NA coding upstream 291037 38908049 ~ 38945175 (-)
LOC120562487 NA coding upstream 490292 39107304 ~ 39142705 (-)
LOC120562358 LOC101076950 coding upstream 1216141 39833153 ~ 39843176 (-)
LOC120562356 ttc24 coding upstream 1284753 39901765 ~ 39923149 (-)
LOC120562362 NA coding upstream 1508413 40125425 ~ 40175116 (-)
G79563 NA non-coding downstream 29607 38528445 ~ 38555962 (-)
G79567 NA non-coding downstream 31784 38552686 ~ 38553785 (-)
LOC120563027 NA non-coding downstream 70494 38501414 ~ 38515075 (-)
G79540 NA non-coding downstream 125569 38458320 ~ 38460000 (-)
G79534 NA non-coding downstream 129816 38409844 ~ 38455753 (-)
G79740 NA non-coding upstream 11046 38628058 ~ 38628449 (-)
LOC120563038 NA non-coding upstream 24853 38641865 ~ 38642612 (-)
G79725 NA non-coding upstream 49725 38666737 ~ 38667209 (-)
G79754 NA non-coding upstream 77583 38694595 ~ 38694943 (-)
G79761 NA non-coding upstream 148660 38765672 ~ 38849892 (-)
LOC120562485 NA other downstream 63180 38516601 ~ 38522389 (-)
LOC120562482 NA other downstream 261285 38318944 ~ 38324284 (-)
G79484 NA other downstream 363809 38063698 ~ 38221760 (-)
LOC120562477 NA other downstream 380387 38140469 ~ 38205182 (-)
LOC120562474 NA other downstream 614221 37958449 ~ 37971348 (-)
nudt17 nudt17 other upstream 49255 38666267 ~ 38680480 (-)
G79767 NA other upstream 289768 38906780 ~ 38908021 (-)
G79820 NA other upstream 480760 39097772 ~ 39138382 (-)
G79872 NA other upstream 779249 39396261 ~ 39456639 (-)
G80027 NA other upstream 959651 39576663 ~ 39577939 (-)

Expression



Co-expression Network