G79787


Basic Information

Item Value
gene id G79787
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39009121 ~ 39009971 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU106855
TCCCCCTAACTGTGCCCTTCCCTGTCCCAGAACCTggttcagagtgtgtgtgtgcgcgcgtgtgtgtgtgtctgtgtgagtgcgcgtgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgcgcgtgtgtgtgtgtcagagtgtgtgtgtgtctgtgtgtgtgcgcgtgtgtgtgggtcagagtgtgtgtgtctgtgtgtgtgcgcgcgtgtgtgtgtgtgtcagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcttgtgtgtgtgagtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgcgcgtctgtgtgcatgtctgtgtgtgtgcgcctgtgtgtgtgtgtgtgtgtatctgaatTTTTTTGCCTTGAATTTACTCAAATTCA
>TU106858
TCCCCCTAACTGTGCCCTTCCCTGTCCCAGAACCTggttcagagtgtgtgtgtgcgcgcgtgtgtgtgtgtctgtgtgagtgcgcgtgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgtgtctgtgtgagtgagtgtgtgtgtctgtgtgcgtgtcagagtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgcgcgtctgtgtgcatgtctgtgtgtgtgcgcctgtgtgtgtgtgtgtgtgtatctgaatTTTTTTGCCTTGAATTTACTCAAATTCA
>TU106861
TCCCCCTAACTGTGCCCTTCCCTGTCCCAGAACCTggttcagagtgtgtgtgtgcgcgcgtgtgtgtgtgtctgtgtgagtgcgcgtgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgcgcgtgtgtgtgtgtcagagtgtgtgtgtgtctgtgtgtgtgcgcgtgtgtgtgggtcagagtgtgtgtgtctgtgtgtgtgcgcgtgtgtgtgtctgtgtgagtgagtgtgtgtgtctgtgtgcgtgtcagagtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgcgcgtctgtgtgcatgtctgtgtgtgtgcgcctgtgtgtgtgtgtgtgtgtatctgaatTTTTTTGCCTTGAATTTACTCAAATTCA
>TU106862
TCCCCCTAACTGTGCCCTTCCCTGTCCCAGAACCTggttcagagtgtgtgtgtgcgcgcgtgtgtgtgtgtctgtgtgagtgcgcgtgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgcgcgtctgtgtgcatgtctgtgtgtgtgcgcctgtgtgtgtgtgtgtgtgtatctgaatTTTTTTGCCTTGAATTTACTCAAATTCA
>TU106863
TCCCCCTAACTGTGCCCTTCCCTGTCCCAGAACCTggttcagagtgtgtgtgtgcgcgcgtgtgtgtgtgtctgtgtgagtgcgcgtgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgcgcgtgtgtgtgtgtcagagtgtgtgtgtgtctgtgtgtgtgcgcgtgtgtgtgggtcagagtgtgtgtgtctgtgtgtgtgcgcgcgtgtgtgtgtgtgtcagagtgtgtgtctgtgtgtgtgcgcgtctgtgtgcatgtctgtgtgtgtgcgcctgtgtgtgtgtgtgtgtgtatctgaatTTTTTTGCCTTGAATTTACTCAAATTCAGatgcaaaatacaatgtttAAAATTGATTCTGAATTCATGAATTTAGCAAAATAAAAGTGTGAATTAGTTCCACCTTCCACACTCTGATCAAAAGATGGGACACTTTATGAATGCATTCAGACTAATTGAGGGCCTTCCTGTACAGGTACATGGTCCCATAGAGGTACTTGTCATCGTGCTGGTCTTTGAGATAATTATTAACATCAATCACGTATCTGTCCATCTCTTGGCTGATCACACGGGTCCACAGTCCCTCGTCCTCCATCAGCTGCAGCTCTTTCTCCAAACACACCTTGTATTTGTCTCCAGACTCCAACTTTGGGTCCACTCTCGACATGCAAACGTAGCCTC
>TU106864
TCCCCCTAACTGTGCCCTTCCCTGTCCCAGAACCTggttcagagtgtgtgtgtgcgcgcgtgtgtgtgtgtctgtgtgagtgcgcgtgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgcgcgtgtgtgtgtgtcagagtgtgtgtgtgtctgtgtgtgtgcgcgtgtgtgtgggtcagagtgtgtgtgtctgtgtgtgtgtgtctgtgtgagtgagtgtgtgtgtctgtgtgcgtgtcagagtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgcgcgtctgtgtgcatgtctgtgtgtgtgcgcctgtgtgtgtgtgtgtgtgtatctgaatTTTTTTGCCTTGAATTTACTCAAATTCA
>TU106865
TCCCCCTAACTGTGCCCTTCCCTGTCCCAGAACCTggttcagagtgtgtgtgtgcgcgcgtgtgtgtgtgtctgtgtgagtgcgcgtgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgcgcgtgtgtgtgtgtcagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcttgtgtgtgtgagtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtcagagtggtgtgtgtgtgtgtgtgtgtgtgtctgtgtgagtgagtgtgtgtgtctgtgtgcgtgtcagagtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgcgcgtctgtgtgcatgtctgtgtgtgtgcgcctgtgtgtgtgtgtgtgtgtatctgaatTTTTTTGCCTTGAATTTACTCAAATTCA
>TU106867
TCCCCCTAACTGTGCCCTTCCCTGTCCCAGAACCTggttcagagtgtgtgtgtgcgcgcgtgtgtgtgtgtctgtgtgagtgcgcgtgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgcgcgtgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgcgcgtctgtgtgcatgtctgtgtgtgtgcgcctgtgtgtgtgtgtgtgtgtatctgaatTTTTTTGCCTTGAATTTACTCAAATTCA
>TU106869
TCCCCCTAACTGTGCCCTTCCCTGTCCCAGAACCTggttcagagtgtgtgtgtgcgcgcgtgtgtgtgtgtctgtgtgagtgcgcgtgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgcgcgtgtgtgtgtgtcagagtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgcgcgtctgtgtgcatgtctgtgtgtgtgcgcctgtgtgtgtgtgtgtgtgtatctgaatTTTTTTGCCTTGAATTTACTCAAATTCAGatgcaaaatacaatgtttAAAATTGATTCTGAATTCATGAATTTAGCAAAATAAAAGTGTGAATTAGTTCCACCTTCCACACTCTGATCAAAAGATGGGACACTTTATGAATGCATTCAGACTAATTGAGGGCCTTCCTGTACAGGTACATGGTCCCATAGAGGTACTTGTCATCGTGCTGGTCTTTGAGATAATTATTAACATCAATCACGTATCTGTCCATCTCTTGGCTGATCACACGGGTCCACAGTCCCTCGTCCTCCATCAGCTGCAGCTCTTTCTCCAAACACACCTTGTATTTGTCTCCAGACTCCAACTTTGGGTCCACTCTCGACATGCAAACGTAGCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106855 False 434 lncRNA 0.53 2 39009473 39009971
TU106858 False 285 lncRNA 0.52 2 39009473 39009971
TU106861 False 377 lncRNA 0.53 2 39009473 39009971
TU106862 False 249 lncRNA 0.51 2 39009473 39009971
TU106863 True 685 lncRNA 0.48 2 39009121 39009971
TU106864 False 367 lncRNA 0.53 2 39009473 39009971
TU106865 False 413 lncRNA 0.52 2 39009473 39009971
TU106867 False 249 lncRNA 0.52 2 39009473 39009971
TU106869 False 615 lncRNA 0.47 2 39009121 39009971

Neighbor

gene id symbol gene type direction distance location
trim33l NA coding downstream 63946 38908049 ~ 38945175 (-)
LOC120563017 NA coding downstream 509464 38489974 ~ 38499657 (-)
LOC120562484 NA coding downstream 524256 38482155 ~ 38484865 (-)
LOC120563005 NA coding downstream 534561 38472146 ~ 38474560 (-)
LOC120563012 NA coding downstream 621937 38375662 ~ 38387184 (-)
LOC120562487 NA coding upstream 97333 39107304 ~ 39142705 (-)
LOC120562358 LOC101076950 coding upstream 823182 39833153 ~ 39843176 (-)
LOC120562356 ttc24 coding upstream 891794 39901765 ~ 39923149 (-)
LOC120562362 NA coding upstream 1115454 40125425 ~ 40175116 (-)
LOC120562374 NA coding upstream 1170371 40180342 ~ 40201133 (-)
G79797 NA non-coding downstream 230 39008636 ~ 39008891 (-)
G79795 NA non-coding downstream 3931 39004046 ~ 39005190 (-)
G79793 NA non-coding downstream 19322 38987904 ~ 38989799 (-)
G79791 NA non-coding downstream 26487 38975396 ~ 38982634 (-)
G79772 NA non-coding downstream 122543 38875190 ~ 38886578 (-)
G79807 NA non-coding upstream 28483 39038454 ~ 39326863 (-)
G79815 NA non-coding upstream 63617 39073588 ~ 39106707 (-)
G79819 NA non-coding upstream 75105 39085076 ~ 39234865 (-)
G79824 NA non-coding upstream 105839 39115810 ~ 39159542 (-)
G79825 NA non-coding upstream 117956 39127927 ~ 39156860 (-)
G79767 NA other downstream 101100 38906780 ~ 38908021 (-)
nudt17 nudt17 other downstream 328641 38666267 ~ 38680480 (-)
LOC120562485 NA other downstream 486732 38516601 ~ 38522389 (-)
LOC120562482 NA other downstream 684837 38318944 ~ 38324284 (-)
LOC120562477 NA other downstream 803939 38140469 ~ 38205182 (-)
G79820 NA other upstream 87801 39097772 ~ 39138382 (-)
G79872 NA other upstream 386290 39396261 ~ 39456639 (-)
G80027 NA other upstream 566692 39576663 ~ 39577939 (-)
G80046 NA other upstream 769413 39779384 ~ 39861548 (-)
LOC120562372 NA other upstream 1193068 40203039 ~ 40234663 (-)

Expression


Co-expression Network