LOC120562364 (LOC108234077)


Basic Information

Item Value
gene id LOC120562364
gene name LOC108234077
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39765173 ~ 39771420 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107036
tgatgatggagaaTTCTGGATGTCCTATTCAGACTTTATCAAGCAGTTCTCCAAGCTGCAGATCTGTAACTTGACCCCAGACACGATCCTGAGTGATAAAGTGGGCCACTGGAACCACTACCAGTATGAAGGGACGTGGAGGAAGGGCTCTACTGCAGGCGGCTGCCGAAATTTCTCAGCCACATTCTCGTCCAACCCTCAGTTTGTGGTGTGCCTGGAGGATGTGGATGATGATCCCCTGGATGGGAAGGATGGATGCACCATTCTGGTTGGGCTCATGCAAAAGGAAAGGCGACAGCATAAGAGGCTCGGCCGCGACCCTGAGTGCATTGGCTTTTACATTTATAAGGTCCCAGATCAGTACAAAGGCCAAAGCAATGTTCACCTGGGTCCAGATGTCCTGCTGGAACAGAGCTTTGTGGC
>TU107044
ATATTTCACTTCCAGATCTGGCAGTTTGGTGAGTGGGTGGATGTGGTGATCGATGACCGTTTACCCACAAGAAAAGGAAAGCTGATATTCGTTAAGTCATCGGAGCGCTCAGAGTTTTGGAGCGCGCTGCTGGAGAAGGCctacgccaaGTTGTATGGCAGCTATGAGGCCCTGTCAGGAGGAAACACTATTGAGGGTTTTGAGGATTTCACAGGAGGGATTGCAGAAGAATACTACTTAGACAAAGCTCCACCGAATCTCTTTCAAATCATGCAGAAGGCCCTGAGCCTGGGTTCATTGCTTGGTTGCTCTATTAAAACCACCAGTACTGATGAGAAAGAGACACGTACAGCTCTCAATCTTTTCAAGGGACATGCATACTCAGTCATTAGGGC
>XM_039806080.1
GCTACATCCACTTACAAGTTGAGGATGACATCCACGGCAGATCGACTGGCCCGTCAGCAGGGCAGGGAACAAGGCATTGGCACAAACAAGAAAGCAGTGAAGTTCTCCCAGCAGGACTATGAGACTCTGCGCCAGCAGTGTTTGAAGAGTGGACGCCTGTTTGAGGACAACTGCTTTCCAGCTGAGCCCGCATCACTGGGCCACAAGGAGCTGGGACCAGGCTCAGAAGAAACCAAGGGGGTTGATTGGAAAAGGCCAATGGAGCTGTGCCCAAACCCAAAGTTCATTGTTGATGGAGCCACAATGACGGACATTTGCCAAGGAAAGCTGGGTGACTGCTGGCTTCTGGCTGCAATAGCCAGTCTGACTCTAGACCAGGACATCCTGCCTCGCGTGGTGCCCCAGGAACAGAGTTTTACTGAAGGTTACGCTGGAATATTTCACTTCCAGATCTGGCAGTTTGGTGAGTGGGTGGATGTGGTGATCGATGACCGTTTACCCACAAGAAAAGGAAAGCTGATATTCGTTAAGTCATCGGAGCGCTCAGAGTTTTGGAGCGCGCTGCTGGAGAAGGCctacgccaaGTTGTATGGCAGCTATGAGGCCCTGTCAGGAGGAAACACTATTGAGGGTTTTGAGGATTTCACAGGAGGGATTGCAGAAGAATACTACTTAGACAAAGCTCCACCGAATCTCTTTCAAATCATGCAGAAGGCCCTGAGCCTGGGTTCATTGCTTGGTTGCTCTATTAAAACCACCAGTACTGATGAGAAAGAGACACGTACAGCTCTCAATCTTTTCAAGGGACATGCATACTCAGTCATTAGGGCAGTAGAGGTTGATATCCAAGGTAAGCCGGTTCAGCTGGTCCGCATCAGGAACCCATGGGGTAACAAGGAGTGGACTGGGCCTTGGAGTGATGGGTCCGGTGAATGGAACGATCTCAGTGAAGATGAGAAATCAAAGTTGAAccctgctgatgatgatgatgatgatgatggagaaTTCTGGATGTCCTATTCAGACTTTATCAAGCAGTTCTCCAAGCTGCAGATCTGTAACTTGACCCCAGACACGATCCTGAGTGATAAAGTGGGCCACTGGAACCACTACCAGTATGAAGGGACGTGGAGGAAGGGCTCTACTGCAGGCGGCTGCCGAAATTTCTCAGCCACATTCTCGTCCAACCCTCAGTTTGTGGTGTGCCTGGAGGATGTGGATGATGATCCCCTGGATGGGAAGGATGGATGCACCATTCTGGTTGGGCTCATGCAAAAGGAAAGGCGACAGCATAAGAGGCTCGGCCGCGACCCTGAGTGCATTGGCTTTTACATTTATAAGGTCCCAGATCAGTACAAAGGCCAAAGCAATGTTCACCTGGGTCCAGATGTCCTGCTGGAACAGAGCTTTGTGGCCAAGAGCTCCTTCCCCAACACACGGGAAGTGTGCAACCGTTTTAAACTTCCTCCAGGAGAATATGTCATTGTTCCCTCGACCTATGATCCTAACAAGGATGGCAGCTTCCTTCTCAGGGTGTTCTCTGAGAAACCGGCTGCAGCCAGTCCACTGGAGGATGACTTTGACATTCAAATAGAGGAGCAGGAGCTATCTGAGAGTGATGTGGATCCTCATTTCAAGGAGCACTTCAAGCAGACTGATGGCAATGACATGGAGGTATCGGCCTTTGAACTGGTTGAGATTTTAAACAAAGTTGTCTCTCAGCGGTCTGATATCAAGACAGAATCCTTCAGCCTGGAGACAGGTCGCCTTATTGTCAGTCTGCTAGATAAAGATGAAAGTGGCAAATTGGGGCTGATGGAATTCAACTTGCTTTGGAGCAAAATCCAGAAATACCTGGCGATCTTCAAGAAACATGACACAGACAGCTCTGGCACCATGAACTCCCACGAGATGAGAGGCGCTGCCACTGAAGCAGGTTTCCAGGTCAACAGTGGTGTGCTGCAGGCCATTGTCAGCCGTTACTCCGATGCTCAGTATGCCATAGACTTTGACTGTTTTGTGGGTTGTCTCATTAAACTGGAAATGCTCTTCAAAATGTTTAAGACTCTGGAGAGAGCTGGCACAGGGAAGATTGAGCTGGATATGCAACAGTGGCTGTGCCTGGCCATCTTCTGATCTGGAGACAAGACAAGAGAGATGATACCTGCTGGAGGATTAACAATACATTTATTGAATtcacaaaaaaatcacatttattttttacaaactaAGTATACTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107036 False 423 TUCP 0.51 5 39767927 39768850
TU107044 False 395 lncRNA 0.47 4 39766269 39767123
XM_039806080.1 True 2241 mRNA 0.49 21 39765173 39771420

Neighbor

gene id symbol gene type direction distance location
LOC120563008 NA coding upstream 338053 39425328 ~ 39427120 (+)
LOC120563011 syt11,LOC102778393 coding upstream 345500 39391948 ~ 39419673 (+)
LOC120562489 NA coding upstream 486670 39265833 ~ 39278503 (+)
LOC120563022 NA coding upstream 734339 39020810 ~ 39030834 (+)
LOC120563021 NA coding upstream 755597 38995153 ~ 39009576 (+)
LOC120562494 LOC108250191,LOC103388058,LOC101480860,LOC107095276 coding downstream 9816 39781236 ~ 39803887 (+)
LOC120562359 NA coding downstream 40435 39811855 ~ 39828704 (+)
LOC120562496 LOC103369586 coding downstream 152905 39924325 ~ 39979365 (+)
LOC120562361 LOC103369586 coding downstream 311610 40083030 ~ 40093260 (+)
si:dkey-15h8.17 NA coding downstream 340013 40111433 ~ 40113823 (+)
LOC120562367 NA non-coding upstream 41189 39723490 ~ 39723984 (+)
LOC120562368 NA non-coding upstream 46334 39714930 ~ 39718839 (+)
G79913 NA non-coding upstream 89856 39674723 ~ 39675317 (+)
G79911 NA non-coding upstream 108371 39656400 ~ 39656802 (+)
LOC120562366 NA non-coding upstream 176691 39574338 ~ 39588482 (+)
G79922 NA non-coding downstream 20267 39791687 ~ 39943001 (+)
LOC120562365 NA non-coding downstream 94357 39865777 ~ 39869961 (+)
G79944 NA non-coding downstream 244139 40015559 ~ 40037161 (+)
G79953 NA non-coding downstream 258955 40030375 ~ 40099065 (+)
G79957 NA non-coding downstream 285593 40057013 ~ 40108481 (+)
G79722 LOC100712425 other upstream 301332 39460448 ~ 39463841 (+)
G79713 NA other upstream 310881 39433461 ~ 39454292 (+)
LOC120563015 NA other upstream 418741 39312639 ~ 39346432 (+)
LOC120563019 NA other upstream 433657 39321432 ~ 39331516 (+)
dcst2 NA other upstream 459086 39302039 ~ 39306087 (+)
LOC120562498 LOC103369894 other downstream 519562 40290982 ~ 40345060 (+)
G80003 NA other downstream 545319 40316739 ~ 40321067 (+)
LOC120562499 LOC103374404 other downstream 607262 40378682 ~ 40441316 (+)
LOC120562387 NA other downstream 874239 40645659 ~ 40656567 (+)
LOC120562400 NA other downstream 1236547 41007967 ~ 41012619 (+)

Expression


Co-expression Network