G79903


Basic Information

Item Value
gene id G79903
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39559108 ~ 39575672 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107047
gtgtgtctctgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtctgtgtgcgtgtgtgtagccagcatatctccaccggactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcagga
>TU107048
gtgtgtctctgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtctgtgtgcgtgtgtgtgtgtgtgtgtctgtgtctctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctatctgtgtgtgtgtgtgtgtgttcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtccttgtgtgtgtgtgtgtgtgtctatgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtttatgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU107047 False 234 lncRNA 0.47 3 39559108 39575672
TU107048 True 396 lncRNA 0.49 2 39559108 39559992

Neighbor

gene id symbol gene type direction distance location
LOC120563008 NA coding upstream 131988 39425328 ~ 39427120 (+)
LOC120563011 syt11,LOC102778393 coding upstream 139435 39391948 ~ 39419673 (+)
LOC120562489 NA coding upstream 280605 39265833 ~ 39278503 (+)
LOC120563022 NA coding upstream 528274 39020810 ~ 39030834 (+)
LOC120563021 NA coding upstream 549532 38995153 ~ 39009576 (+)
LOC120562494 LOC108250191,LOC103388058,LOC101480860,LOC107095276 coding downstream 205564 39781236 ~ 39803887 (+)
LOC120562359 NA coding downstream 236183 39811855 ~ 39828704 (+)
LOC120562496 LOC103369586 coding downstream 348653 39924325 ~ 39979365 (+)
LOC120562361 LOC103369586 coding downstream 507358 40083030 ~ 40093260 (+)
si:dkey-15h8.17 NA coding downstream 535761 40111433 ~ 40113823 (+)
LOC120563030 NA non-coding upstream 57971 39499346 ~ 39501137 (+)
LOC120563029 NA non-coding upstream 73128 39484951 ~ 39485980 (+)
LOC120563031 LOC107095265,LOC103369586 non-coding upstream 79719 39475775 ~ 39479389 (+)
G79717 NA non-coding upstream 125987 39432313 ~ 39433121 (+)
G79714 NA non-coding upstream 159821 39398655 ~ 39399287 (+)
G79911 NA non-coding downstream 80728 39656400 ~ 39656802 (+)
G79913 NA non-coding downstream 99051 39674723 ~ 39675317 (+)
G79918 NA non-coding downstream 137541 39713213 ~ 39778094 (+)
G79919 NA non-coding downstream 138435 39714107 ~ 39870796 (+)
LOC120562368 NA non-coding downstream 139258 39714930 ~ 39718839 (+)
G79722 LOC100712425 other upstream 95267 39460448 ~ 39463841 (+)
G79713 NA other upstream 104816 39433461 ~ 39454292 (+)
LOC120563015 NA other upstream 212676 39312639 ~ 39346432 (+)
LOC120563019 NA other upstream 227592 39321432 ~ 39331516 (+)
dcst2 NA other upstream 253021 39302039 ~ 39306087 (+)
LOC120562364 LOC108234077 other downstream 189501 39765173 ~ 39771420 (+)
LOC120562498 LOC103369894 other downstream 715310 40290982 ~ 40345060 (+)
G80003 NA other downstream 741067 40316739 ~ 40321067 (+)
LOC120562499 LOC103374404 other downstream 803010 40378682 ~ 40441316 (+)
LOC120562387 NA other downstream 1069987 40645659 ~ 40656567 (+)

Expression


Co-expression Network