LOC120562498 (LOC103369894)


Basic Information

Item Value
gene id LOC120562498
gene name LOC103369894
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40290982 ~ 40345060 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107169
TGGAAACACATGTTTACAGATGGTTCCCAGCAGGTGCTACAGTGTGGACTGTTTGAGGAGCAGCAGGCGTTTGAACGCAGCCGGCGGTTCCTGCGCCAGCTGGAGATCAGTTTTGGAGATAATCCATCTCATTACCAGAAGATCATCAAAGCTCTGCAGACCGGTCCGGACCTGAGTCCAAACAGCATCGCCGAGctgAAGGCCCAGATGTCTGCGCTGCTGAAAGGCCACACCCACCTCCAGACTGAATTCTGGGTATTTTTTGACGAGCTCCGCCCCCCCCCAGCCCGCCCAGGACAGTTCGAAGAAGCTCATTGGCCGGAGGACGGAGGGGGCGGGTCCGACGGCGGGGAGGGCGGCGGCCTCGTGTTAGGGGGCGGAGCCAGCTGCGGCTTCGAGGAAGTGACGCtcccagagctggaggaggaagaggaggggctTAAGATCCAACCAATGGCGAGCCGGCGTCAGAGGAGGAAGATGGACGCCCACAGGAACTACAAGgactgtgattggtcggaTGAGGCAAAGATCAGCAGACACAGGAGGAAAGGATGCTCTCACTGCCATGGCAACAAGACCTCAGGGGGCGTGTCCAGAGCCATGAAGAGTCTGGACCCGCTGTACTCTCAGATAAGCTCCGCCCACAAAGACCTGGACCTGAAGGGGGACCACAGTCCAcaaccagACGGCAGTGGTGCATCA
>XM_039806207.1
aaggacTCGGTCCGGAAGTCGTATTGTTGTTGGCGGAACAGAGCTGAAAGGAGCTAAAGGAGCTAACCGAAGCTAACAGATATGACGGAGTAATAACAAATGGCTGCTGTCGTTAGTCTCACGCGGATGGAGAGGAGGCGTCCAGCACAAGAGGACATTTGTCCTCTGGAGTCTAAGTCTTTGAGGGCGGACGGAGAggacagacaggaagaggacagacaggaagaggacagacaggaagaggacagacaggaagaggacagacaggaagaggacagacaggaagaggacagacaggaagaggacagacaggaagaggacagacaggaagaggacagacaggaagaggagagaacagCTGTCTCCGGTGACATCACGGTGACAGGTCAACACTTCGGAGCCAATAAAGTTTGGTTGAATTCAGCCGTCGACGTGGCGACCAGCGAGGCCAGCGAGGACGAACTGGGACGACTGGACATCGACCTGGACAGGAAGTCCAAACAGCACAACTTGACGTCCAGCAACGTGCGCGCCATCCTGCacGAGGTGATTACCCATGAGCACGTGGTGGCCATGATGAAAGCTGCCATCAGAGACACGCAGGACCTCCccatgtttgaGCCCAAGATGACTCGATCTAGACTGAAACAGGCCATTCAGCAGGGACAGCCACTGAACTGGAGTCTGTCTGCAGTGAACACAGCCAAGCCTCCTCAGTTTGTGGACATAGAtctggaggaggatgaggactCGTCAGATGAAGAGTATTGtcctgaggaagaggaggaagaggaagacacGGCTGAAGAGacattCCTCAGTGATGCAGACAGCTTGGCTTCACCTCCCAAAATGCATCAGGACTCTCATCCCAGAGTTTGGGCAGACCAGAGGACTGATGACCCGCTACAGAGACCCCCAGGACAGCTGGGAGACCCCCTAACCTGCACTCCTCATCACCTCCTCCCACCTCCAGAGTCCTCCTTCCTGGAGAGACTCAACGCTGTGGATGAGGAGCTGGACAGCAGCGCTGTCTACACATATAACCAGtCTCTGGACAGAAAAGCTGACGatgctgctgatgatgatgatggcggTGGCGGCGATGAAGGCTCCAGCTGTTTGGCGTTCCGTACGCGCTCCAAGCGTCCCCTGGTGAACGTTCCTCTGGGCCAGCTGGAGGCGGAGCTTCTGGCCCCTGACATCACTGAAGACATGTACGAGCAGAGCGCTGCCCAGCGGAAGCAGGACCGCCACTGGACCAAGTGGCTGCAGGGCCTCATGGCCCCCGACACCGACGAGGAAGCCGACGATGAAGACGACCCCGAGTACAACTTCCTGGAGGACGTGGACGAGCCGGACCTGGAGGACTACCGGACGGACCGCGGCGTCCAGATCACCAAGAAGGAAGTGAaccagctgctggaggagctCTTTGATACACtccaggaggaagaggaggaacacGAGGAAGAGGAGCCCTCTCAGACTGGACCCAAGTTCAACGTCCCCCAGGCTTTACGTTTTGATGCTCCGTTAGCCAGCATGCTAACGGAGCGCCGGCGGACGGTGAGGAAACAGTACGAAGCTGCTCAGCAGAGGAGAGCCCTGCAGGACACCACCAACCATCACCGTGACAATAAGGAAGCAGCCGGCCCGGCGCCAGACCCCGTCCCCTCCGTGTTGGTGCTGCCGGGCCGGGTGGAGCCCCCCCTCCACCTAAACTCGCCCCAGaagctgcagctgcagcagcagataCAGCAGGTACAACCAGCAACCCTAACCCTTGTTGTCTGTGTTCTgcaggaggagctgcagcagttcTCCAGCCGACGGGAGCAGGTTTTGCTGCCCAGCAGCTTCAGGGTGTGTAACCTGCGGGGGGCGCTGGATCTCCTGCAGGAGGTGGAGCAGAGGGCGGAGCCTCCTGTTACTCCACTTCCTGTCCCTGCTGCGGCCTCCAGACGCTTGCTCCCCAGCATGACTCCTGCCACCAACAgCCACGCCTTCCCTCTGCTGCCCGCTGAAGACGCCTGGCTGTTCGCCACGCGTCCCGTCTTCCTGTACCCAGAACTACTTCCTGTCTGCAGCCTGGACCCCCCCGCACACAGCCAGCGGCCCCGCAGCATTTACACCGCCGGAGAGGACGGGCTGATCGTTCTGGCTCTGAAGCACTTTGCGGAGACGCTGCAGCCAGACCAGCTGATCAGCTGCTACCTGGTCTGTAAATCTCGCTGGAACTTCAGGAAACACGTGAGGGACATGAGTGGACCGAGAGCGCCGAGCAGCAGCGTCATCAAGATGTTTGTGACGCAGCGAGTCGTCCCACCGTTGCCGCTTGCCTGCAGCCGAGTTGATCCGGGAGAGCAGCGCCCCCCGGTGGACAGAAACACCCCCAACACGCCAAACTGGCTCAAGAACAGTCAGCTGATCATCCAGAAGTCCCGTCTGAGCTCCGGCCATTACCCCCCTTCCCTCCCCCCGGGCATCACCCTCAGGCTCCACCCCTATTGGCTCAGCAAGTCCTCACATCCACCTCCACCTTCACACAGACGGATCTTCGCCCTGGCCCACAATGCATCTCTGCCGCCTCTCGCACAACGCccagcagacagacagtcagacagaccaGAGGACTCGCTGTTAGACAGGCAGGCATCGCGGAAATCAAAGAGACGAACAGACAGATGGTTGGACAGAAAGATAAACCAACCGATGGACAGACAGCCAATCAACACCCTGTCTCTCCCCCCTCCAGGTGTCACTTTACTCTCTGACTCCGCTGTTTCCACAGCTCTGTCTCCGCCTCTCGCTGTTTCTGGAGCCCTGGCTCCGCCCCCTGTCTGTGGGGCTGTCTCATTGGCTGCTGTCCATCCAGGCCCCGCCCACATCCTCCAGCCCTGCCTTCCTATTGGCCAGtggacacagcagcagcagagcagcagagcttctctccctctcccctctctgacCGATGCTCGGACAAATGTGACTCCGGCGTACTTCCTCCTCCAGATGGTGTGGACGCCCGCCGCCACCTCCCAGCATGCTCTGGGGCAACAGCTCCACAGACCAATCAAAGAGGAGCGAGAGGACACAACGCCACGCCTTCCACTGGAGGAAGAGAGACGGGAAGAGGAGGAAAGTTCAGGTTCATCATCAACACTCAGCCCGATGTCTTCCTGTGAAGAAGgggaagaggggagagagggaggagaagaggagaactGGGCTGATCTGGGTGTGCTGAACGGAGTACAAAATactggaggagaggaagaagaggggagagaagggggaagagaggaagaggagggtgcaggaggaggaggaggagagggggatgaAGATCAGGACCggcagggagaggaggaagaggaggaggaggaggacttcGATGACCTCACGCAGGACGAAGACGAAGAGGAAGTGATGTCGTCTGCGTCGGAGGAGTCGGTGCTGTCGGTGCCAGAGTTACAGgAGACGATGAAGCAGCTGACGTGGCTGGCGGCCGAGCGGCGTCTCTGTACAGATGGAGACTCTGAGGAAGACCACTCCCCCACCtctcaggaggaggaggaggaggaggaagaggaggggcctAAAGGGGAGGAGTctggagagggggggggcagcaaggagggaggagaagaggagggaggagacgaGGAGACGCCAGCAGGAGAGGAGACgaccagaggaggagcaggaggacgCTGTCTGGGACGGGGAAGAgGTCGTAGCCGTCCTCTCCGAGGTCTGAGGAGAGGACGCCAGCAGCGCCACAGCAAAGACGCCGCTAAACTCCTCCAGCTGTACGACGACAACATCGTCAACAATGACCcgcagagagagagcaaggaCCTGGCCTTCGCCCAGAGCTACCTCCACAggGTGCATGAAGTAGATTTtggggtatgGTGTGCTGAAGTAGATTttgggtatggtaacctctgtcccgtgttgtgttcagGTGCGGGAGTAGATTttgggtatggtaacctctgtcccggTGTGTTTCAGGTGCGGGAAGTAGATTTTGGCatatgGTGCGTGAAGATAGATTttgggtatggtaacctctgtcccggTGTGTTTCAGGTGCATGAAGTAGATTttgggtatggtaacctctgtcccgtgGTCGTTCAGGTGCGTGAAGTAGATTTtgggGTGCATGAAGTAGATTttgggtatggtaacctctgtcccgtgtgTCTTCAGGTGCATGAAGTAGATTttgggtatggtaacctctgtcccggTGGTCTTCAGgtgcgtgaAGTAGATTTtggtatgTGGAAACACATGTTTACAGATGGTTCCCAGCAGGTGCTACAGTGTGGACTGTTTGAGGAGCAGCAGGCGTTTGAACGCAGCCGGCGGTTCCTGCGCCAGCTGGAGATCAGTTTTGGAGATAATCCATCTCATTACCAGAAGATCATCAAAGCTCTGCAGACCGGTCCGGACCTGAGTCCAAACAGCATCGCCGAGctgAAGGCCCAGATGTCTGCGCTGCTGAAAGGCCACACCCACCTCCAGACTGAATTCTGGGTATTTTTTGACGAGCTCCGCCCCCCCCCAGCCCGCCCAGGACAGTTCGAAGAAGCTCATTGGCCGGAGGACGGAGGGGGCGGGTCCGACGGCGGGGAGGGCGGCGGCCTCGTGTTAGGGGGCGGAGCCAGCTGCGGCTTCGAGGAAGTGACGCtcccagagctggaggaggaagaggaggggctTAAGATCCAACCAATGGCGAGCCGGCGTCAGAGGAGGAAGATGGACGCCCACAGGAACTACAAGgactgtgattggtcggaTGAGGCAAAGATCAGCAGACACAGGAGGAAAGGATGCTCTCACTGCCATGGCAACAAGACCTCAGGGGGCGTGTCCAGAGCCATGAAGAGTCTGGACCCGCTGTACTCTCAGATAAGCTCCGCCCACAAAGACCTGGACCTGAAGGGGGACCACAGTCCAcaaccagcTGATGCACCAGCTGCTCATCCTTCAGAAACACCACCACTGCTTTGTTCATTCTGGATGCAAAAGACAAGTTGTCATAGCTACCTGTTCACCAACCGCCAACAGCACCTCCTCCACAGTAACATTACTCTCCGGGGGGGCTATCCTCACGCCCTGCCGGAGACTCGGAGGTGGCGTCTCAAAGGACGCCATTCCTCCCGAAAAAAGACCCCGATTCCTCAGCAGACACTCCACAAAAAAGGTCTAAGAAACTTACCTGATCATGCACCAAAAAGACAGACTGAAGACAGTCAGAACATCCGAAAACAGAAACAGTTAGAAACTCCACtcgcacctcctcctcctccactcacACTCACCGGAaacggagaggagaggagaggagaggggaggagaggagaagatagatga

Function

NR:

description
PREDICTED: GON-4-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107169 False 705 TUCP 0.59 6 40334362 40345060
XM_039806207.1 True 5397 mRNA 0.58 37 40290982 40344206

Neighbor

gene id symbol gene type direction distance location
LOC120562376 LOC103369584 coding upstream 1381 40268948 ~ 40289601 (+)
LOC120562377 NA coding upstream 9230 40278196 ~ 40281752 (+)
LOC120562363 NA coding upstream 138897 40139733 ~ 40152085 (+)
si:dkey-15h8.17 NA coding upstream 177159 40111433 ~ 40113823 (+)
LOC120562361 LOC103369586 coding upstream 197722 40083030 ~ 40093260 (+)
LOC120562382 LOC104937304,LOC103131143,LOC103374405,LOC102237830,LOC100708478,LOC102793710,LOC102303267 coding downstream 106228 40451288 ~ 40477146 (+)
decr1 decr1 coding downstream 142543 40487603 ~ 40507973 (+)
LOC120562386 NA coding downstream 164990 40510050 ~ 40549415 (+)
LOC120562500 NA coding downstream 310452 40655512 ~ 40660314 (+)
LOC120562405 NA coding downstream 485452 40830512 ~ 40837078 (+)
G79998 NA non-coding upstream 10970 40279686 ~ 40280012 (+)
G79982 NA non-coding upstream 35462 40222373 ~ 40255520 (+)
G79960 NA non-coding upstream 170471 40120170 ~ 40120511 (+)
G79957 NA non-coding upstream 182501 40057013 ~ 40108481 (+)
G79953 NA non-coding upstream 191917 40030375 ~ 40099065 (+)
LOC120562379 NA non-coding downstream 1387 40346447 ~ 40347372 (+)
G80008 tmem79,LOC103369887,LOC102205740,LOC102794394,LOC101478387 non-coding downstream 11108 40356168 ~ 40399888 (+)
G80019 NA non-coding downstream 99325 40444385 ~ 40444717 (+)
G80015 NA non-coding downstream 109387 40454447 ~ 40456102 (+)
G80021 NA non-coding downstream 136751 40481811 ~ 40485057 (+)
LOC120562364 LOC108234077 other upstream 519562 39765173 ~ 39771420 (+)
G79722 LOC100712425 other upstream 827141 39460448 ~ 39463841 (+)
G79713 NA other upstream 836690 39433461 ~ 39454292 (+)
LOC120563015 NA other upstream 944550 39312639 ~ 39346432 (+)
LOC120563019 NA other upstream 959466 39321432 ~ 39331516 (+)
LOC120562499 LOC103374404 other downstream 33622 40378682 ~ 40441316 (+)
LOC120562387 NA other downstream 300599 40645659 ~ 40656567 (+)
LOC120562400 NA other downstream 662907 41007967 ~ 41012619 (+)
polr3glb NA other downstream 811414 41156474 ~ 41186945 (+)
G80320 NA other downstream 1011420 41356480 ~ 41360206 (+)

Expression


Co-expression Network