G80003


Basic Information

Item Value
gene id G80003
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40316739 ~ 40321067 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107200
gaccattatcaggttggtgggtcaggaccattatcaggttggtgggtcaggaccattatcaggttggtgggtcaggaccattatcaggaccattatcaggtcggtgtgtcaggaccattatcaggtcGGTGGTacaggaccattatcaggttggtgggtcaggaccattatcaggttggtgtgacaggaccattatcagcttggtgtgtcaggaccaTTAACAGGTTGgtgtcaggac
>TU107203
gtcaggaccattatcaggtcGGTGGTacaggaccattatcaggttggtgggtcaggaccattatcaggttggtgtgacaggaccattatcagcttggtgtgtcaggaccaTTAACAGGTTGgtgtcaggaccattatcaggtaGGTtctcaggaccattatcaggtaGGTGAGTCAtgaccattatcaggttggtgggtcaggaccactatcaggttggtgggtcaggaccactaccaggaccattatcaggaccattatcaggttggtgggtcaggaccattatcagctCGGTGtatcaggaccattatcaggttggtgtgtcaggaccgttatcaggaccattatcaggttggtgggtcaggaccattatcagcttggtgtgtcaggaccattatcaggttggtgtgtcagg
>TU107204
gaccattatcaggttggtgggtcaggaccattatcaggttggtgggtcaggaccattatcaggttggtgggtcaggaccattatcaggaccattatcaggtcggtgtgtcaggaccattatcaggttggtgggtcaggaccattatcaggttggtgtgacaggaccattatcagcttggtgtgtcaggaccaTTAACAGGTTGgtgtcaggaccattatcaggtaGGTtctcaggaccattatcaggtaGGTGAGTCAtgaccattatcaggttggtgggtcaggaccactatcaggttggtgggtcaggaccactaccaggaccattatcaggaccattatcaggttggtgggtcaggaccattatcagctCGGTGtatcaggaccattatcaggttggtgtgtcaggaccgttatcaggaccattatcaggttggtgggtcaggaccattatcagctCGGTGtatcaggaccattatcaggttggtgtgtcaggaccgttatcaggaccattatcaggttggtgggtcaggaccattatcagctCGGTGTATCAtgaccattatcaggttggtgggtcaggaccactatcaggttggtgggtcaggaccattatcaggttggtgtatcatgaccattatcaggttggtgggtcaggaccactatcaggttggtgggtcaggaccactatcaggttggtgggtcaggaccattatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107200 False 238 lncRNA 0.50 3 40316739 40319008
TU107203 False 414 lncRNA 0.50 2 40317807 40319433
TU107204 True 718 TUCP 0.50 5 40316739 40321067

Neighbor

gene id symbol gene type direction distance location
LOC120562376 LOC103369584 coding upstream 27138 40268948 ~ 40289601 (+)
LOC120562377 NA coding upstream 34987 40278196 ~ 40281752 (+)
LOC120562363 NA coding upstream 164654 40139733 ~ 40152085 (+)
si:dkey-15h8.17 NA coding upstream 202916 40111433 ~ 40113823 (+)
LOC120562361 LOC103369586 coding upstream 223479 40083030 ~ 40093260 (+)
LOC120562382 LOC104937304,LOC103131143,LOC103374405,LOC102237830,LOC100708478,LOC102793710,LOC102303267 coding downstream 130221 40451288 ~ 40477146 (+)
decr1 decr1 coding downstream 166536 40487603 ~ 40507973 (+)
LOC120562386 NA coding downstream 188983 40510050 ~ 40549415 (+)
LOC120562500 NA coding downstream 334445 40655512 ~ 40660314 (+)
LOC120562405 NA coding downstream 509445 40830512 ~ 40837078 (+)
G80002 NA non-coding upstream 148 40315432 ~ 40316591 (+)
G79998 NA non-coding upstream 36727 40279686 ~ 40280012 (+)
G79982 NA non-coding upstream 61219 40222373 ~ 40255520 (+)
G79960 NA non-coding upstream 196228 40120170 ~ 40120511 (+)
G79957 NA non-coding upstream 208258 40057013 ~ 40108481 (+)
G80005 NA non-coding downstream 8121 40329188 ~ 40331187 (+)
LOC120562379 NA non-coding downstream 25380 40346447 ~ 40347372 (+)
G80008 tmem79,LOC103369887,LOC102205740,LOC102794394,LOC101478387 non-coding downstream 35101 40356168 ~ 40399888 (+)
G80019 NA non-coding downstream 123318 40444385 ~ 40444717 (+)
G80015 NA non-coding downstream 133380 40454447 ~ 40456102 (+)
LOC120562364 LOC108234077 other upstream 545319 39765173 ~ 39771420 (+)
G79722 LOC100712425 other upstream 852898 39460448 ~ 39463841 (+)
G79713 NA other upstream 862447 39433461 ~ 39454292 (+)
LOC120563015 NA other upstream 970307 39312639 ~ 39346432 (+)
LOC120562499 LOC103374404 other downstream 57615 40378682 ~ 40441316 (+)
LOC120562387 NA other downstream 324592 40645659 ~ 40656567 (+)
LOC120562400 NA other downstream 686900 41007967 ~ 41012619 (+)
polr3glb NA other downstream 835407 41156474 ~ 41186945 (+)
G80320 NA other downstream 1035413 41356480 ~ 41360206 (+)

Expression


Co-expression Network