G80158



Basic Information


Item Value
gene id G80158
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40321915 ~ 40322561 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU107443
ccctcctcttcctcctcctcctcctcctcctgagaGGTGGGGGAGTGGTCTTCCTCAGAGTCTCCATCTGTACAGAGACGCCGCTCGGCCGCCAGCCACGTCAGCTGCTTCATCGTCTcctagagagacagacagacagagagacaggcagagagagagagacggatagagagacagagagagagagacagacagacagacagagagagagacagacagacagagagagacggacggttaatatgtgtgtttgtgtatgtatgcaccaatcacCGTGTAGGGTAACTACTGCAGCACTAAGCTGCTCTGTGATTCTGATTCAGAGACTAAAGGTCCCACCAGTGCTCTGGTCCAGTCTAGCTGTTGTGGGTAACTTCATACTGGCCGTCCCAGAGCAACAACCCCCTGCCTATATTAATACTTCATACTGGCCGTCCCAGAGCAACAACCCCCTGCCTATATTAATACTTCATACTGGCCGTCCCAAAGCAACAACCCCCTGCCTATATTAATACTCCATACTGGCCGTCCCAGAGCAACAACCCCCTGCCTATATTAATACTTCATACTGGCCCAGAGCAACAACCCCCTGCCTATATTAATAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU107443 True 605 lncRNA 0.52 2 40321915 40322561

Neighbor


gene id symbol gene type direction distance location
LOC120562375 NA coding downstream 69761 40245385 ~ 40252154 (-)
LOC120562374 NA coding downstream 120782 40180342 ~ 40201133 (-)
LOC120562362 NA coding downstream 146799 40125425 ~ 40175116 (-)
LOC120562356 ttc24 coding downstream 398766 39901765 ~ 39923149 (-)
LOC120562358 LOC101076950 coding downstream 478739 39833153 ~ 39843176 (-)
tmem79b NA coding upstream 32073 40354634 ~ 40364184 (-)
pmvk pmvk coding upstream 157505 40480066 ~ 40487346 (-)
LOC120562399 NA coding upstream 488674 40811235 ~ 40816555 (-)
LOC120562403 NA coding upstream 561560 40884121 ~ 40888754 (-)
LOC120562505 LOC100690881,LOC102207812,LOC101474950 coding upstream 1077249 41399810 ~ 41409787 (-)
G80154 NA non-coding downstream 3641 40316745 ~ 40318274 (-)
G80142 NA non-coding downstream 28974 40292510 ~ 40292941 (-)
G80088 NA non-coding downstream 198583 40091864 ~ 40123332 (-)
G80099 NA non-coding downstream 222269 40057011 ~ 40099646 (-)
G80102 NA non-coding downstream 222924 40083369 ~ 40098991 (-)
G80170 NA non-coding upstream 94517 40417078 ~ 40420432 (-)
G80177 NA non-coding upstream 121824 40444385 ~ 40444708 (-)
G80178 LOC103374405,LOC107095278,LOC104937304,LOC102793710,LOC100708478,LOC102303267 non-coding upstream 128752 40451313 ~ 40471247 (-)
G80185 NA non-coding upstream 167896 40490457 ~ 40492193 (-)
G80218 NA non-coding upstream 350907 40673468 ~ 40674902 (-)
G80129 NA other downstream 14392 40222367 ~ 40307523 (-)
LOC120562372 NA other downstream 87252 40203039 ~ 40234663 (-)
G80046 NA other downstream 460367 39779384 ~ 39861548 (-)
G80027 NA other downstream 743976 39576663 ~ 39577939 (-)
G79872 NA other downstream 865276 39396261 ~ 39456639 (-)
G80186 NA other upstream 169762 40492323 ~ 40497596 (-)
LOC120562415 NA other upstream 355782 40678343 ~ 40765467 (-)
G80488 NA other upstream 693289 41015850 ~ 41017192 (-)
G80498 NA other upstream 780682 41103243 ~ 41104094 (-)
LOC120562506 NA other upstream 1090392 41412953 ~ 41421025 (-)

Expression



Co-expression Network