G80200


Basic Information

Item Value
gene id G80200
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40612166 ~ 40612567 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107548
gaccgctacacaccagccaagtgtgaagtcccatgtatgttaaaatctcttgagcatccacatcactccatcctgagattgaacacctcccgtgtaggtttgtcatttcctgaatcagctggatcatgtcaagagtgaagaaaaggtcgaaagaggatgccacatcatggattcttgatatggcatatctcgtgggctctgacataatgccggtcggtgcttgaatattGCGCaggtctcagtattagatggagaccagacttgccaattcttcactgtccattcaatgttaggatgaacaggatcttcagtgtcctctccactttcagaggaaggttagaggcactcacagagttggaggacaccagtgaccatttggtcagactccagaaacttgtgtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107548 True 402 lncRNA 0.47 1 40612166 40612567

Neighbor

gene id symbol gene type direction distance location
LOC120562386 NA coding upstream 62751 40510050 ~ 40549415 (+)
decr1 decr1 coding upstream 104193 40487603 ~ 40507973 (+)
LOC120562382 LOC104937304,LOC103131143,LOC103374405,LOC102237830,LOC100708478,LOC102793710,LOC102303267 coding upstream 135020 40451288 ~ 40477146 (+)
LOC120562376 LOC103369584 coding upstream 322565 40268948 ~ 40289601 (+)
LOC120562377 NA coding upstream 330414 40278196 ~ 40281752 (+)
LOC120562500 NA coding downstream 42945 40655512 ~ 40660314 (+)
LOC120562405 NA coding downstream 217945 40830512 ~ 40837078 (+)
LOC120562402 NA coding downstream 294761 40907328 ~ 40907836 (+)
LOC120562401 NA coding downstream 489481 41102048 ~ 41103783 (+)
LOC120562397 NA coding downstream 535297 41147864 ~ 41150002 (+)
G80024 NA non-coding upstream 117979 40492974 ~ 40494187 (+)
G80021 NA non-coding upstream 127109 40481811 ~ 40485057 (+)
G80015 NA non-coding upstream 156064 40454447 ~ 40456102 (+)
G80019 NA non-coding upstream 167449 40444385 ~ 40444717 (+)
G80008 tmem79,LOC103369887,LOC102205740,LOC102794394,LOC101478387 non-coding upstream 212278 40356168 ~ 40399888 (+)
G80222 NA non-coding downstream 144230 40756797 ~ 40758554 (+)
G80223 NA non-coding downstream 148844 40761411 ~ 40762310 (+)
LOC120562411 NA non-coding downstream 162234 40774801 ~ 40775942 (+)
G80230 NA non-coding downstream 162468 40775035 ~ 40782050 (+)
LOC120562410 NA non-coding downstream 167177 40779744 ~ 40781918 (+)
LOC120562499 LOC103374404 other upstream 170850 40378682 ~ 40441316 (+)
LOC120562498 LOC103369894 other upstream 267106 40290982 ~ 40345060 (+)
G80003 NA other upstream 291099 40316739 ~ 40321067 (+)
LOC120562364 LOC108234077 other upstream 840746 39765173 ~ 39771420 (+)
G79722 LOC100712425 other upstream 1148325 39460448 ~ 39463841 (+)
LOC120562387 NA other downstream 33092 40645659 ~ 40656567 (+)
LOC120562400 NA other downstream 395400 41007967 ~ 41012619 (+)
polr3glb NA other downstream 543907 41156474 ~ 41186945 (+)
G80320 NA other downstream 743913 41356480 ~ 41360206 (+)
LOC120562389 NA other downstream 764880 41377447 ~ 41393226 (+)

Expression


Co-expression Network