G80230


Basic Information

Item Value
gene id G80230
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40775035 ~ 40782050 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107594
ctctctctcctgtcattcAGGCATCTCCTGCTGCTGACTCTAGAActcatctctctcctgtcattcagATCAACATGAAGATCTATATCCTTgttctgctgctctctgctgctctgctgTTCGTGGGACCAGAAACTGCTGATGCAACATCGATTGTCATCAAGATTAAGAATTATAAGAAGACTGGCCGTAATAAAGGTTTGCCAGCATCTGCAGCACCTGCAGCACCTGCAGAACCTGCAGCACCTGCAGAACCTGCAGCACCTgcgtaatctgttactacctgatgaatctgagtaatctgttactacctgatgtatctgagtaatctgttactacctgatgaaccagagtaatctattactacctgatgaatcagagtaatctgttactacctgatgaaccagagtaatctgttactacctgttGAATAAAACACATGTGACAGTTTAACTCTGGGTCTGTTTTTAATGCCGTCATGTTCACTCATTCATAAAGTAGATGAAAGTACAgatcaatataataataatatctttGTTTGTAAAGCACCTTTCACACATTAAATACAGCTCAAAGTGTTTTACA
>TU107599
CAGGCATCTCCTGCTGCTGACTCTAGAactcatctctctcctctcattcagATCAACATGAAGATCTATATCCTTgttctgctgctctctgctgctctgctgTTCGTGGGACCAGAAACTGCTGATGCAACATCGATTATCATCAAGATTAAGAATTATAAGAAGACTGGCCGTAATAAAGGTTCGCCAGCACCTGCAGCACCTGCAGAACCTGCAGCACCTGCAGAACCTGCAGCACCTGCAGCCCCTGGTTGTCcaacctgatgaatcagagtaatctgttactacctgatgaataaaACACATGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107594 True 585 lncRNA 0.41 3 40779742 40782050
TU107599 False 309 lncRNA 0.47 2 40775035 40775934

Neighbor

gene id symbol gene type direction distance location
LOC120562500 NA coding upstream 114721 40655512 ~ 40660314 (+)
LOC120562386 NA coding upstream 225620 40510050 ~ 40549415 (+)
decr1 decr1 coding upstream 267062 40487603 ~ 40507973 (+)
LOC120562382 LOC104937304,LOC103131143,LOC103374405,LOC102237830,LOC100708478,LOC102793710,LOC102303267 coding upstream 297889 40451288 ~ 40477146 (+)
LOC120562377 NA coding upstream 493283 40278196 ~ 40281752 (+)
LOC120562405 NA coding downstream 48462 40830512 ~ 40837078 (+)
LOC120562402 NA coding downstream 125278 40907328 ~ 40907836 (+)
LOC120562401 NA coding downstream 319998 41102048 ~ 41103783 (+)
LOC120562397 NA coding downstream 365814 41147864 ~ 41150002 (+)
LOC120562391 NA coding downstream 381693 41163743 ~ 41174846 (+)
G80223 NA non-coding upstream 12725 40761411 ~ 40762310 (+)
G80222 NA non-coding upstream 16481 40756797 ~ 40758554 (+)
G80200 NA non-coding upstream 162468 40612166 ~ 40612567 (+)
G80024 NA non-coding upstream 280848 40492974 ~ 40494187 (+)
G80021 NA non-coding upstream 289978 40481811 ~ 40485057 (+)
G80234 NA non-coding downstream 19346 40801396 ~ 40868851 (+)
G80237 NA non-coding downstream 79602 40861652 ~ 40875376 (+)
LOC120562418 NA non-coding downstream 122211 40904261 ~ 40904961 (+)
LOC120562409 NA non-coding downstream 176318 40958368 ~ 40959705 (+)
G80271 NA non-coding downstream 185300 40967350 ~ 40967816 (+)
LOC120562387 NA other upstream 118468 40645659 ~ 40656567 (+)
LOC120562499 LOC103374404 other upstream 333719 40378682 ~ 40441316 (+)
LOC120562498 LOC103369894 other upstream 429975 40290982 ~ 40345060 (+)
G80003 NA other upstream 453968 40316739 ~ 40321067 (+)
LOC120562364 LOC108234077 other upstream 1003615 39765173 ~ 39771420 (+)
LOC120562400 NA other downstream 225917 41007967 ~ 41012619 (+)
polr3glb NA other downstream 374424 41156474 ~ 41186945 (+)
G80320 NA other downstream 574430 41356480 ~ 41360206 (+)
LOC120562389 NA other downstream 595397 41377447 ~ 41393226 (+)
G80337 NA other downstream 639306 41421356 ~ 41456358 (+)

Expression


Co-expression Network