G80299


Basic Information

Item Value
gene id G80299
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41215521 ~ 41598153 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107723
TCATTTCAAtgaacattttatttgattattCAAAAGCCTCCAATACATTCATCACAtgacatttagctgatgcttttatccattAAGTTCATTCAACCATGAAGTTACAAACTCCTGACAGCAAGAATCAAGTGCAAGAACATTAGTTTAAAATCATTTCATGTTATGACAAAATCACAATTTGTAGATAATGTCATGAagattttattagatttttcaaaacccttcatttcattcattaaCATACAGTTTTTAGAACGGTAAAAGTAAagttacaattatttatttttttaattaacttttatttaaccaggtaggccgttgaggACAGAtggcgacctggccaagaaaagcataagtGTGCAAGACatcatacagtttcacattcaatacagtCTAAGAATGCAGAAtataataggctacataaaataCAGATTAAAATACAGATTAGGTAGGAATTACAAAGCCGGCgcaaagtgaggtgtaagtaagtCGATGGATATGTGAAAGTGATGtgataataacacaatatacatgaatagacatTCTATATAAATGCTGAAGTGTAgtg
>TU107725
AGTAAGTCGATGGATATGCGAAAGTGATAtggtaataacacaatatacatgaatagacagtctatataaatgctgaaatgtagtaaagAGTCAGTGCAAATTGTGGTCTAGATAGTGGTGTTGaatcagttataacacaatatatatatgaataggcAGTCAATGTAAGTGCTGAAATATAGGGgagagtcaatatacagttagtgctaATGATTTGTAAGATTAAATAATAAAGAAATgaggataaaaaataaaaataagagagCATCCAAGAGAGTCTTGTTCCCCCATACCCTACCCAATCCTCCTTCTACTCATCTAACTCGCTCAAGAGATATagtaatacactgcatatatgtattttataacTTTCATTGTGACAGGTAAGAAACCAAGGGCTGCCAAGTTTTAATGTAATGTGGTGAGTTGTCTTTCATTACATATCTTATCCTTTCCAGATGTAATATACTGGTCAGGTCTTGGAGCCACATCCTGTACGTAGGAACCATCGTCCCTTTCCATAACATCAAAATCAATAATGCCAAAAAAACGAAACACAACTTTGTTGCACTAACAAGCCCTtatgctgctacatcaccacCAAAAACCTTGTCACTATTACTAAATCTACTGAAGAGCTGGTAAACATAAACGCAAGGCCTTTTCAGATACTTTCTGTGCATCCTCAGCAAACATGTCAAGGAACATGTTGAGAGATTTGTATTTGGAGAGAAAAGATGTGGCCATTGCTACTGGGATTCCTAATAATGGAAGAAATCTAGACCCTTCCTCTGCTGCTTCTAATGAAAGTAAATCCACAGAAGAGCGTATTATCATCTCAATAAGatctttgtttatttcttttccaGCCAGTGGTGATGTCATCACTGCTCTAAGCTCCTCCAAAGGCACACCTGCAGTCTGAGCAAGACGCTGCAGTGACTCGCTATCAAGACCAAAGGTGGCTTCGTATTGTCTAATGGTGGTAAATATCATGAACATATCAATGGCATCAGATAACCCAGGAACTGGTAAAGCTGCTCCCAATGCAGATCCACTGGCAAGGTACTTTATTCTAGCCTGTAaagcttctttcttttttatgatGACTTCAAGACTGACAGGGGGCAAGGCCAACAGCAGAGCATTCTTCTTGTGTGCAGGAAGTTCTTCCTCTAAGGTTTTCTCTAACAGATGGAAATCATACAGGTGGAGATCACGGCTGGACACCAGGAAGACTTGTGGAGACTCAACACGTCCTTTAAGACCTTCGTCACAAAGAGAACAGGAAGTTAACTTCACATgaggaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107723 False 571 lncRNA 0.31 2 41472608 41598153
TU107725 True 1310 lncRNA 0.39 2 41215521 41474414

Neighbor

gene id symbol gene type direction distance location
LOC120562391 NA coding upstream 40675 41163743 ~ 41174846 (+)
LOC120562397 NA coding upstream 65519 41147864 ~ 41150002 (+)
LOC120562401 NA coding upstream 111738 41102048 ~ 41103783 (+)
LOC120562402 NA coding upstream 307685 40907328 ~ 40907836 (+)
LOC120562405 NA coding upstream 378443 40830512 ~ 40837078 (+)
LOC120561585 NA coding downstream 129413 41727566 ~ 41850702 (+)
LOC120562755 NA coding downstream 929343 42527496 ~ 42529482 (+)
LOC120562768 NA coding downstream 1065365 42663518 ~ 42666003 (+)
LOC120562762 LOC104963449 coding downstream 1166250 42764403 ~ 42768664 (+)
LOC120562761 LOC104963449 coding downstream 1189556 42787709 ~ 42800596 (+)
LOC120562412 NA non-coding upstream 79347 41135950 ~ 41136174 (+)
G80265 NA non-coding upstream 107795 41068184 ~ 41107726 (+)
LOC120562408 NA non-coding upstream 123607 41091477 ~ 41091914 (+)
G80280 LOC100709493,LOC102203400,LOC102799186,LOC102289534,LOC101466554,LOC103358480 non-coding upstream 170129 41044777 ~ 41045392 (+)
LOC120562417 NA non-coding upstream 233894 40979110 ~ 40981627 (+)
G80364 NA non-coding downstream 15947 41614100 ~ 41615261 (+)
G80365 NA non-coding downstream 18756 41616909 ~ 41617366 (+)
G80363 NA non-coding downstream 39985 41638138 ~ 41697410 (+)
G80376 NA non-coding downstream 52354 41650507 ~ 41650950 (+)
LOC120561593 NA non-coding downstream 113502 41711655 ~ 41717691 (+)
polr3glb NA other upstream 28576 41156474 ~ 41186945 (+)
LOC120562400 NA other upstream 202902 41007967 ~ 41012619 (+)
LOC120562387 NA other upstream 558954 40645659 ~ 40656567 (+)
LOC120562499 LOC103374404 other upstream 774205 40378682 ~ 40441316 (+)
LOC120562498 LOC103369894 other upstream 870461 40290982 ~ 40345060 (+)
LOC120561589 NA other downstream 84260 41682413 ~ 41693005 (+)
G80410 NA other downstream 341345 41939498 ~ 42006594 (+)
G80682 NA other downstream 887182 42485335 ~ 42486009 (+)
LOC120562757 LOC104947480 other downstream 934771 42532924 ~ 42539601 (+)
LOC120562767 NA other downstream 1034254 42632407 ~ 42643990 (+)

Expression


Co-expression Network