G80321 (txnip,LOC102791564,LOC102307684,LOC101475238,LOC102207340)


Basic Information

Item Value
gene id G80321
gene name txnip,LOC102791564,LOC102307684,LOC101475238,LOC102207340
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41360459 ~ 41362553 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107758
ATTGCAGCATTAATCAGCCGTTTGGGTTTCCTTTTCCCTCCACACAGTCACATCACAACATCCTGTTTCTTTGGACAGAGTCCCTAAagtgctctctgattggtcagaatCTGTGTCCCTGCTGCGATGTCATCCCGACTCACCATGAGGGCGTAGTCAACCTTGATGATGTCACAGCCGAGCAGCGAGGGCTTCAGTTTGGGGACTCGGATGGTCTTGCCCTGCCACATGTCACACATCCCCGAAATGATGTGGTTCCCCCGGACCGCACACAGCTTCTCATGGGCCTCCTTGGTGCGTCCGTCGGCGAGGTACGAGTGCTTGGCGATGATGGCGGCTTTGGGAACCACAATACGAGAGCAGGTGTTCTCAAACTTGGCGTTGATGCAGATGTCTTCTCCCTGGCAGAAGCCTTTCCTGTCGATCTGAGCGCTGATGGACACCTGGCCGTCCGGGATGAACATGCAGGTAACCTTCTTCTGATTGGCCGCCGCCGCCGGAGCCTGAGGAGGCCACAGCCAGCGTTAATATCGCCGTAATAATCAGCCGACAGACACAAAGGAGCCACAAAGGAGCTTATTTTAGGGCTGCCAGTAGATCAAGGGGGAAAAGAAGCATCCAAAAGacaAAAAGTCAACGAAAAATTGACAGAAAGGCGACAAAGAGGCGCTGTTTGTAGTGATTAATAAAGAGATGTGTGTAGTGATTAATAAAGAGATGTGTGTATTGATTAATAGAGATGTGTGTAGTGATTAATAAAGAGATGTGTGTAGTGATTAATAGAGATGTGTGTAGTGATTAATAAAGAGATGTGTGTAGTGATTAATAAAGAGATGTGTGTATTGATTAATAGAGAT

Function

symbol description
txnip Enables ubiquitin protein ligase binding activity. Involved in cellular response to tumor cell; keratinocyte differentiation; and negative regulation of cell division. Located in cytoplasm.

NR:

description
PREDICTED: thioredoxin-interacting protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107758 True 857 lncRNA 0.48 4 41360459 41362553

Neighbor

gene id symbol gene type direction distance location
LOC120562390 NA coding upstream 40755 41239083 ~ 41319704 (+)
LOC120562388 NA coding upstream 66078 41220084 ~ 41294381 (+)
LOC120562391 NA coding upstream 185613 41163743 ~ 41174846 (+)
LOC120562397 NA coding upstream 210457 41147864 ~ 41150002 (+)
LOC120562401 NA coding upstream 256676 41102048 ~ 41103783 (+)
LOC120562404 NA coding downstream 137632 41500185 ~ 41501659 (+)
LOC120562396 NA coding downstream 178537 41541090 ~ 41545594 (+)
LOC120562406 NA coding downstream 188538 41551091 ~ 41576503 (+)
LOC120561585 NA coding downstream 365013 41727566 ~ 41850702 (+)
LOC120562755 NA coding downstream 1164943 42527496 ~ 42529482 (+)
G80306 NA non-coding upstream 12562 41313711 ~ 41347897 (+)
LOC120562412 NA non-coding upstream 224285 41135950 ~ 41136174 (+)
G80265 NA non-coding upstream 252733 41068184 ~ 41107726 (+)
LOC120562408 NA non-coding upstream 268545 41091477 ~ 41091914 (+)
G80280 LOC100709493,LOC102203400,LOC102799186,LOC102289534,LOC101466554,LOC103358480 non-coding upstream 315067 41044777 ~ 41045392 (+)
G80322 NA non-coding downstream 126 41362679 ~ 41363468 (+)
G80323 NA non-coding downstream 985 41363538 ~ 41364714 (+)
G80339 NA non-coding downstream 70493 41433046 ~ 41433547 (+)
G80346 NA non-coding downstream 122019 41484572 ~ 41486069 (+)
G80348 NA non-coding downstream 129291 41491844 ~ 41492653 (+)
G80320 NA other upstream 253 41356480 ~ 41360206 (+)
polr3glb NA other upstream 173514 41156474 ~ 41186945 (+)
LOC120562400 NA other upstream 347840 41007967 ~ 41012619 (+)
LOC120562387 NA other upstream 703892 40645659 ~ 40656567 (+)
LOC120562499 LOC103374404 other upstream 919143 40378682 ~ 40441316 (+)
LOC120562389 NA other downstream 14894 41377447 ~ 41393226 (+)
G80337 NA other downstream 58803 41421356 ~ 41456358 (+)
LOC120561589 NA other downstream 319860 41682413 ~ 41693005 (+)
G80410 NA other downstream 576945 41939498 ~ 42006594 (+)
G80682 NA other downstream 1122782 42485335 ~ 42486009 (+)

Expression


Co-expression Network