G80337


Basic Information

Item Value
gene id G80337
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41421356 ~ 41456358 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107784
TTTATATTTGCGAGCTGCTCTGAGACCCCTTCAGGGACCGTCTGGAAGAATCAACGCTGGCTCCAACAGAACACAAACTTACACCAAAACTTCCCCTTTTTctgctgctgacacacacacacacacacacacacacacacacacacacacatacacacacacacacacacacacagaaACAGGAACAGGAAGTGTCAGTtggtttttaaatatttaaacgtACCTTTTCGTCTTCTCAGCGTCCGTGCGCCCAGCAGGGGAGCTCATGATGTCACAGTGATGTCACGGCGTGTTCTGACCAGGACGTGTGAGCGTCCGGACatcagtgtctctgtctctctctctctctctctctctctctgtctatctctgtctgtctctctctctctctctctctctgtctgtctctctctctctctgtctgtctctctctctctctctctctctctctctctctctgtctgtctctctctctctctgtctctctgtctctctctctgtctctctctctctctctgtctctctctctctctctgtctccctctgtctgtctgtctgtctctgtctgtctgtctgtgtgtgtctccctctctttctctctctctctctctctctgtctccctctctccctctccctgtctgtctccctctccctgtctccctgtctgtctccctgtctgtctgtctgtctgtctgtctctctctctctgtctctctctctccctctccctgtctgtctgtctgtctgtctgtctgtgtgtctctctctctctgtctctttctatctctccctcaacctgtctgtctgtctgtctgtctgtctgtctctctgtgtgtctctctctctctttctctctctctttctctctctctctctctctctctctctccgacaGG
>TU107785
tctctctgtctgtctctctctctctgtctgtctgtctctctctctgtctctctctctctctctgtctctctctctctctctgtctccctctgtctgtctgtctgtctctgtctgtctgtctgtgtgtgtctccctctctttctctctctctctctctctctgtctccctctctccctctccctgtctgtctccctctccctgtctccctgtctgtctccctgtctgtctgtctgtctgtctgtctctctctctctgtctctctctctccCTTTCTATCT
>TU107787
TTTATATTTGCGAGCTGCTCTGAGACCCCTTCAGGGACCGTCTGGAAGAATCAACGCTGGCTCCAACAGAACACAAACTTACACCAAAACTTCCCCTTTTTctgctgctgacacacacacacacacacacacacacacacacacacacacatacacacacacacacacacacacagaaACAGGAACAGGAAGTGTCAGTtggtttttaaatatttaaacgtACCTTTTCGTCTTCTCAGCGTCCGTGCGCCCAGCAGGGGAGCTCATGATGTCACAGTGATGTCACGGCGTGTTCTGACCAGGACGTGTGAGCGTCCGGACatcagtgtctctgtctctctctctctctctctctctctctgtctatctctgtctgtctctctctctctctctctctgtctgtctctctctctctctgtctgtctctctctctctctctctctctctctctctctctgtctgtctctctctctctctgtctctctgtctctctctctgtctctctctctctctctgtctctctctctctctctgtctccctctgtctgtctgtctgtctctgtctgtctgtctgtgtgtgtctccctctctttctctctctctctctctctctgtctccctctctccctctccctgtctgtctccctctccctgtctccctgtctgtctccctgtctgtctgtctgtctgtctgtctctctctctctgtctctctctctccctctccctgtctgtctgtctgtctgtctgtctgtgtgtctctctctctctgtctctttctatctctccctcaacctgtctgtctgtctgtctgtctgtctgtctctctgtgtgtctctctctctctttctctctctctttctctctctctctctctctctctctctccgacaGG
>TU107788
tctctctgtctgtctctctctctctgtctgtctctctctgtctgtctctctctctctctgtctgtctctctctctctctctctctctctctctctctctgtctgtctctctctctctctgtctctctgtctctctctctgtctctctctctctctctgtctctctctctctctctgtctccctctgtctgtctgtctgtctctgtctgtctgtctgtgtgtgtctccctctctttctctctctctctctctctctgtctccctctctccctctccctgtctgtctccctctccctgtctccctgtctgtctccctgtctgtctgtctgtctgtctgtctctctctctctgtctctctctctctctttctatctctccctcaacctgtctgtctgtctgtctgtctgtctgtctctctgtgtgtctctctctctctttctctctctctttctctctctctctctctctctctctctccgacaGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107784 True 897 TUCP 0.51 4 41421356 41422578
TU107785 False 279 lncRNA 0.52 3 41421959 41456358
TU107787 False 895 TUCP 0.51 4 41421356 41422578
TU107788 False 483 lncRNA 0.51 3 41421959 41422578

Neighbor

gene id symbol gene type direction distance location
LOC120562390 NA coding upstream 101652 41239083 ~ 41319704 (+)
LOC120562388 NA coding upstream 126975 41220084 ~ 41294381 (+)
LOC120562391 NA coding upstream 246510 41163743 ~ 41174846 (+)
LOC120562397 NA coding upstream 271354 41147864 ~ 41150002 (+)
LOC120562401 NA coding upstream 317573 41102048 ~ 41103783 (+)
LOC120562404 NA coding downstream 43827 41500185 ~ 41501659 (+)
LOC120562396 NA coding downstream 84732 41541090 ~ 41545594 (+)
LOC120562406 NA coding downstream 94733 41551091 ~ 41576503 (+)
LOC120561585 NA coding downstream 271208 41727566 ~ 41850702 (+)
LOC120562755 NA coding downstream 1071138 42527496 ~ 42529482 (+)
G80318 NA non-coding upstream 19190 41348582 ~ 41402166 (+)
G80323 NA non-coding upstream 56642 41363538 ~ 41364714 (+)
G80322 NA non-coding upstream 57888 41362679 ~ 41363468 (+)
G80321 txnip,LOC102791564,LOC102307684,LOC101475238,LOC102207340 non-coding upstream 58803 41360459 ~ 41362553 (+)
G80306 NA non-coding upstream 73459 41313711 ~ 41347897 (+)
G80346 NA non-coding downstream 28214 41484572 ~ 41486069 (+)
G80348 NA non-coding downstream 35486 41491844 ~ 41492653 (+)
G80351 NA non-coding downstream 45987 41502345 ~ 41503240 (+)
LOC120562422 NA non-coding downstream 72705 41529063 ~ 41530064 (+)
LOC120562420 NA non-coding downstream 82652 41539010 ~ 41539592 (+)
LOC120562389 NA other upstream 28130 41377447 ~ 41393226 (+)
G80320 NA other upstream 61150 41356480 ~ 41360206 (+)
polr3glb NA other upstream 234411 41156474 ~ 41186945 (+)
LOC120562400 NA other upstream 408737 41007967 ~ 41012619 (+)
LOC120562387 NA other upstream 764789 40645659 ~ 40656567 (+)
LOC120561589 NA other downstream 226055 41682413 ~ 41693005 (+)
G80410 NA other downstream 483140 41939498 ~ 42006594 (+)
G80682 NA other downstream 1028977 42485335 ~ 42486009 (+)
LOC120562757 LOC104947480 other downstream 1076566 42532924 ~ 42539601 (+)
LOC120562767 NA other downstream 1176049 42632407 ~ 42643990 (+)

Expression


Co-expression Network