G80346


Basic Information

Item Value
gene id G80346
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41484572 ~ 41486069 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107800
gctcctctcactgctcctctccactgctcctctcactgctcctctcactgctcctcccactgctcctcccactgctcctctcactgctcctctcaaTGCACCTGAACCTCCTTCTGCATCTCTCACTGCTTCTGcacctctccctccatctctcactgggcctgctcttctccctgggccccctcctcttcctcttcctcttcctcttcctcttcctcttcctcgtccAGACATTAcagtgtttgtatttttctgtttctgtttccaaACACATCACTCCTCAAAGTCCTTCTTTCatagtaattgagagaaatAACCCCTGCCACTGAGTCTAAGCCAGACTGGAATCAGCTGTGGTTGGCCCACTTTACCCAACATGAATCAGCTGTGTGTCaatttttcaattgtttttattttcagctgAGATATGTTGTTTTTGAACTAATATCATTGCAGAAGCAGatttttttatactgtatctAAGGTTTGGATAATTGTTTTTGCTATTGTGGGATGTTGTGTGTTAACATTCGTAAATACTACAAAAACAATCCATCATTTTGTTGGGAGGTATAGCTTGTCTGTTAAGAAAATGTAAGCGTTGTGGAAATGTGTTCACTGACTGCATATTGTGTGAAAAAGACATGAAATATGTGAATTGTATGGCCAAAAAAGACTGATGCTGTGCTAattgtgtttagagttttgaaaatgtgacaaCTGTTTGGACAAATGCTTGTTAGCGACTGAAAAAGACTGTAATACCATCATACTGAAAATCATACAATTTTACTGTATAAATATGGAGATTTCTGGAAGCAAAGACCCATACTTGTGCTGTAAAACaagtcaaaatatgaaatttgagGTGCCATAAAAAGACTTTGGTCCATAGTCCCAGGCAATGACTGATATATTTGAGTAGAGGACATCACTTAATACCATCATACTGAAAATCATACAATTTTACTGTATAAATATGGAGATTTCTGGAAGCAAAGTCCCATACTTGTGCTGTAAAACgagtcaaaatatgaaatttgagGTTGAAGACTACTAATACAAAGAACAGTACAAAGTGTGTTACACAAGACAAATCTGCATGATTTGTTTTGTCCATGATCTGTGATACGACAGGAAATTCCCAATATTGACAATATTaaagagatagaaagagaaGGAATGATATATCTTACCGTCTGTGTTACTTGAGGAATGTTACGACTCAGCAGGAAAGTTTAACTTCTGTCTctactgttgttgttttgtaatgttttaaaaaagttcAGCAACGTCAACGATGTGGCCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107800 True 1311 lncRNA 0.39 2 41484572 41486069

Neighbor

gene id symbol gene type direction distance location
LOC120562390 NA coding upstream 164868 41239083 ~ 41319704 (+)
LOC120562388 NA coding upstream 190191 41220084 ~ 41294381 (+)
LOC120562391 NA coding upstream 309726 41163743 ~ 41174846 (+)
LOC120562397 NA coding upstream 334570 41147864 ~ 41150002 (+)
LOC120562401 NA coding upstream 380789 41102048 ~ 41103783 (+)
LOC120562404 NA coding downstream 14116 41500185 ~ 41501659 (+)
LOC120562396 NA coding downstream 55021 41541090 ~ 41545594 (+)
LOC120562406 NA coding downstream 65022 41551091 ~ 41576503 (+)
LOC120561585 NA coding downstream 241497 41727566 ~ 41850702 (+)
LOC120562755 NA coding downstream 1041427 42527496 ~ 42529482 (+)
G80339 NA non-coding upstream 51025 41433046 ~ 41433547 (+)
G80318 NA non-coding upstream 82406 41348582 ~ 41402166 (+)
G80323 NA non-coding upstream 119858 41363538 ~ 41364714 (+)
G80322 NA non-coding upstream 121104 41362679 ~ 41363468 (+)
G80321 txnip,LOC102791564,LOC102307684,LOC101475238,LOC102207340 non-coding upstream 122019 41360459 ~ 41362553 (+)
G80348 NA non-coding downstream 5775 41491844 ~ 41492653 (+)
G80351 NA non-coding downstream 16276 41502345 ~ 41503240 (+)
LOC120562422 NA non-coding downstream 42994 41529063 ~ 41530064 (+)
LOC120562420 NA non-coding downstream 52941 41539010 ~ 41539592 (+)
G80364 NA non-coding downstream 128031 41614100 ~ 41615261 (+)
G80337 NA other upstream 28214 41421356 ~ 41456358 (+)
LOC120562389 NA other upstream 91346 41377447 ~ 41393226 (+)
G80320 NA other upstream 124366 41356480 ~ 41360206 (+)
polr3glb NA other upstream 297627 41156474 ~ 41186945 (+)
LOC120562400 NA other upstream 471953 41007967 ~ 41012619 (+)
LOC120561589 NA other downstream 196344 41682413 ~ 41693005 (+)
G80410 NA other downstream 453429 41939498 ~ 42006594 (+)
G80682 NA other downstream 999266 42485335 ~ 42486009 (+)
LOC120562757 LOC104947480 other downstream 1046855 42532924 ~ 42539601 (+)
LOC120562767 NA other downstream 1146338 42632407 ~ 42643990 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G324034 NA non-coding CI01000110 null 2343876 ~ 2344209 (-)