G80364


Basic Information

Item Value
gene id G80364
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41614100 ~ 41615261 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107841
TGAAATGTCTGAAAGTTTATTGGCTGGATGATCCTCGGAGCTAAATCAACATACACGTTTATTTCTATAAAACATACAGACTATGTTAACTGTAAATAACTGCAGACAGGTACACAACATTTCACTCTAattatcatttatatatatttagttttctCTTTCAATCAGAGGAATAAAACATGCACAGGTTTCATGTTTTCATCATCAGGGATGTTGAAATGTCTTGTGTTACATCTTCAGTGTGACGTCTAGTTTCtgttcatctttaacatctttcGCCTCGTTAGAAGATCTTTGGGGCTCGTTTCAGTACGTTTGTTCTGTCGacacttttatatattttataattaaaCACTGATGTAAGATTTGATCGCGCTGCTGATTTAAAACCATCAGAGATGATCAGAGACTGAAGTCGCACGGGACGTTCAACCTGAGCATACACAGTGTTACGGGACATTTAACAGACTGTCCCCCCCCCTGAAGAAACTCCCCCAGAAGTTGGTATgttccagcatcattctgacctatatttaggtttgtagtggtggcgccctctagtggccacaGTAGTTCtgatgggagcaaagcaggaagggGGAAACGCCAAAGAGCAGGGgcaatgagagggggaaacaccaaagcagggggaatgagagggggaaacgccagagcagggggaatgagagggggaaacgccagagcagggggaatgagagggggaaacgccagagcaggggaatgagagggggaaacgccagagcagggggaatgagagggggaaacgccagaatGAGAGgggggaaacgccagagcagggggaatgagagggggaaatttAACCTGAGTGTACACAGCGACAAGCTGTTGTCAGTCTGAGTGAAACATCCCTGTTTGTTTGTGAATTAACTTGTTTCTCctgtcagCTGATGTGTGTTTCCTGTCAGCTGATGTGTTTTTCCTGTCAGCTGATGTGTTTACAGCTCCGGTGACCTCTGACCacccagagaggagaggagggttAGATCTTCTCCACGTAGTTTCCGGGGAACATCCCCTCTCTGCCCCGCAACCGCCCGAACCACCAACCAGACGGA

Function

GO: NA

KEGG:

id description
ko00600 Sphingolipid metabolism
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU107841 True 1097 lncRNA 0.47 3 41614100 41615261

Neighbor

gene id symbol gene type direction distance location
LOC120562406 NA coding upstream 37597 41551091 ~ 41576503 (+)
LOC120562396 NA coding upstream 68506 41541090 ~ 41545594 (+)
LOC120562404 NA coding upstream 112441 41500185 ~ 41501659 (+)
LOC120562390 NA coding upstream 294396 41239083 ~ 41319704 (+)
LOC120562388 NA coding upstream 319719 41220084 ~ 41294381 (+)
LOC120561585 NA coding downstream 112305 41727566 ~ 41850702 (+)
LOC120562755 NA coding downstream 912235 42527496 ~ 42529482 (+)
LOC120562768 NA coding downstream 1048257 42663518 ~ 42666003 (+)
LOC120562762 LOC104963449 coding downstream 1149142 42764403 ~ 42768664 (+)
LOC120562761 LOC104963449 coding downstream 1172448 42787709 ~ 42800596 (+)
G80299 NA non-coding upstream 15947 41215521 ~ 41598153 (+)
LOC120562420 NA non-coding upstream 74508 41539010 ~ 41539592 (+)
LOC120562422 NA non-coding upstream 84036 41529063 ~ 41530064 (+)
G80351 NA non-coding upstream 110860 41502345 ~ 41503240 (+)
G80348 NA non-coding upstream 121447 41491844 ~ 41492653 (+)
G80365 NA non-coding downstream 1648 41616909 ~ 41617366 (+)
G80363 NA non-coding downstream 22877 41638138 ~ 41697410 (+)
G80376 NA non-coding downstream 35246 41650507 ~ 41650950 (+)
LOC120561593 NA non-coding downstream 96394 41711655 ~ 41717691 (+)
LOC120561592 NA non-coding downstream 149540 41764801 ~ 41768650 (+)
G80337 NA other upstream 157742 41421356 ~ 41456358 (+)
LOC120562389 NA other upstream 220874 41377447 ~ 41393226 (+)
G80320 NA other upstream 253894 41356480 ~ 41360206 (+)
polr3glb NA other upstream 427155 41156474 ~ 41186945 (+)
LOC120562400 NA other upstream 601481 41007967 ~ 41012619 (+)
LOC120561589 NA other downstream 67152 41682413 ~ 41693005 (+)
G80410 NA other downstream 324237 41939498 ~ 42006594 (+)
G80682 NA other downstream 870074 42485335 ~ 42486009 (+)
LOC120562757 LOC104947480 other downstream 917663 42532924 ~ 42539601 (+)
LOC120562767 NA other downstream 1017146 42632407 ~ 42643990 (+)

Expression


Co-expression Network