LOC120561589


Basic Information

Item Value
gene id LOC120561589
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41682413 ~ 41693005 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107866
GATGGAGGTTCTGACCTCTTCTCCCCCAAAAGGAGACTGGAGCCCCTCAGTGAGGATGGGAGTTCAGGTGTAGATGATCAGAGTCCAGAAAAAAGCTTGGTGAAGAGGCcctcacagaagaagaaaagatgtaaaatgtccaaaacagtGGAAGCAATGGATGGAGGTTCTGACCTCTTCTCCCCCAAAAGGAGACTGGAGCCCCTCAGTGAGGATGGGAGTTC
>XM_039804729.1
TCTCATGACTTGTTTGTAAAGTTTTCAATCTTCTTTTTGGTTTTAGGTCCAGAAGTTGATGGCTGTGAGAAAAACACAGTTAGACTGTGTCTTTGAGGAGTCAGGAAGTGATTCCTCTGGGTCTGAACTATGCAGCCACACCGGATTGGACCCAGATTACAAGCCACCTCTGAATGCATCATCATCCAGTGATGATGAAGATTTGAAAAGCCCAGGCAAAGCTAAGAAATTGTCCCGTAAAGAAGAGTTCAAAGGTACAGACACAAATTCAAGTGAAGATGGAGATCCGCAAGGAGGCAAAATCACCATTGGgaagaaaaagaacacaaaaacgTATgcgaaaatacaaaataaagaacaaaagaGGACCAAAAAAGATAAAGTGACTGTAACCCTGACTGTAAAAACTTGTACAAAAAGAGAAGACAACAAACGTGCATGGGACAAAAAGCACTATTGCCTGTACTGTGGCCAATCAAACGCTAAGATGGCAAGGCATTTGCAGAGAAAGCATATGGAGATCAAGGATGTAGCATATGCCTTCAGTTTCCCTTTAGGATCGAAGAAAGAAAGGTTCTTTTGGAACAACTGCGAAATAAAGGTGATTTTAAGCACAATAGCAAAGTCCTGGCAAAAGGCAGAGGAGAACTAGTGACATGGAAGCAGCCCTCTCATAAAGCTTCTGTTACGGATTATTTGCCttgcacattttgttttggAATGTTTGCAAAAAAGGATTTGTGGAGACATCAGTCATCATGCAAAAGCAAAAAGTCATGTGTGCCAGTagatgaaaaaaagacaagaggaGCAGTACAAAGTTGTGCTGCACGCCTCCTTCCAATAACTGCTTCTTCCAATGGATGTCAGGGTATCATAAACAACATGAGACAAGATGATGTGTCCTTTCACATCAGAAGTGATTCTTTGATTTGCAAATATGGAGAGTCACTCTATGCAAAACACGGCCGTGTGAAGTCCAGGCACCAGTACATTGCACAAAGGATGAGGGAGCTTGGCCGATTCATGTTGGCTGCTAAAGCTATGGACAAAACAGTGAGGAGTCTGGAAGATGTATGTGCACCATCAAAATTTCAGCTTGTTGTCAGTGCAGTAAAGCGGCTTACCGAGTTTAGTCCAGGCAAAAATGAGTATGGGAAACCTTCAACAGCGGTTAAAATTGGATTCTGTCTTAAAGGAGCTGCAGAGGTACAGATTGGGCAGGCTCTTATGCATGATGATGATCAGGCAGAGAAGAAGGCAAAAAAGTTCTTGGAACTTTTGGAACGAAACTGGAGAAACAATGTTTCTGTCAGTGCTCACCAAACTATCCAAGAAAAGAGATGGAATAAAAAAGAGGACATCCCCCTCACCAAAAATGTGATTGCGCTGAGGGATTATCTCAGGATGGTAGAAGACAAAGCAAGAGGGGAATTGAGGCAACAGCTGAGTTTAACAGCATACAAGACACTAAATGAGACAGTACTAGCACAGGTCATCGTCTTCAACAAGCGACGTGAAGGGGAAGCATCACGCTTGACACTTGAAGCCTACAAGAAAGGAAGCACAAATCCCATAAACGAGGACATTTATGTAACCCTGTCACCACTGGAGAAAGAGCTGAGCAAGCGATTAACTCGCATAGAAGTACGCggaaaaagagggagaaaggTACCTGTTTTCTTGACAGACAAAATGAGGGAGTCCATAGACTTGTTGATTAAAAGGAGAGATGAAGCTGGTGTTCTTGCTGAAAATCCCTATCTCTTTGCAAGACCCGGTGTGATGACGCACATACGAGGGTGTGACTGTCTGCGAAAATATGCAGAGAAAAGCGGAGCAGAAAACCCTGATCTCCTGAGGTCAACTAAATTAAGAAAACAGGTTGCCACACTCTGCCAACTGCTGGATCTGAGTGAACAAGAGCTAGAACAAGTTGCAAGGTTCATGGGGCATGACATCAGAGTCCACCGTGACTTTTACAGACAGACcgacaaaacatttcaaattgcCAAGATAAGCAAGCTTCTATTTGCAATGGAACAAGGTGCCTCCACCTTCACGGGAAAGAACCTTGATACAATTGATCTTTCTGTCTGTGGTAAATGTCCCACATCGACTTCTGAGAGTGTCCCACAGAGAAAACGGAAACAAGTTAACGAGGTGGATGAAGATGGAGGTTCTGACCTCTTCTCCCCCAAAAGGAGACTGGAGCCCCTCAGTGAGGATGGGAGTTCAGGTGTAGATGATCAGAGTCCAGAAAAAAGCTTGGTGAAGAGGCcctcacagaagaagaaaagatgtaaaatgtccaaaacagtGGAAGCAATGGtgCCACCCATAGTAAAGGTGAGGAGACCATGGAGTGAAGCAGAGAGGAGTGCGGTAAACAAACACATGGCAAAGTTTATTGCAGAGCGCCGCGTTCCAGGTAAAGAACACTGCATGCGATGCATAAAAGAGGAGGAAGCCTTGGGTAAAAGATCCTGGAAGGATGTAAAGAACTTTGTGTacaacacaaatgtcacattaaaCCGGAGGAGTGCTACAAGGCAGCTTCACTTTTGACAATCTTTATTGTGCAATATAATGTTATGTTCTAGTTGATGTCTGCTGCAGTTCTTTTGATGCTTTGTGCAGTAGTGTTCAAGTGGTGTTTCAAAACATAGAaataagtagggttgggcatcgtttggatattaacgattctgatt
>XM_039804730.1
TGGTACAGTCCATTTTCAAGATAATGGTAGCATGGTTCTGTAAAGTTGGACTTGAAAGTGAATGTGATGTCTTTCTCATGATTATGCTTTTTACTTACAGTTAGACTGTGTCTTTGAGGAGTCAGGAAGTGATTCCTCTGGGTCTGAACTATGCAGCCACACCGGATTGGACCCAGATTACAAGCCACCTCTGAATGCATCATCATCCAGTGATGATGAAGATTTGAAAAGCCCAGGCAAAGCTAAGAAATTGTCCCGTAAAGAAGAGTTCAAAGGTACAGACACAAATTCAAGTGAAGATGGAGATCCGCAAGGAGGCAAAATCACCATTGGgaagaaaaagaacacaaaaacgTATgcgaaaatacaaaataaagaacaaaagaGGACCAAAAAAGATAAAGTGACTGTAACCCTGACTGTAAAAACTTGTACAAAAAGAGAAGACAACAAACGTGCATGGGACAAAAAGCACTATTGCCTGTACTGTGGCCAATCAAACGCTAAGATGGCAAGGCATTTGCAGAGAAAGCATATGGAGATCAAGGATGTAGCATATGCCTTCAGTTTCCCTTTAGGATCGAAGAAAGAAAGGTTCTTTTGGAACAACTGCGAAATAAAGGTGATTTTAAGCACAATAGCAAAGTCCTGGCAAAAGGCAGAGGAGAACTAGTGACATGGAAGCAGCCCTCTCATAAAGCTTCTGTTACGGATTATTTGCCttgcacattttgttttggAATGTTTGCAAAAAAGGATTTGTGGAGACATCAGTCATCATGCAAAAGCAAAAAGTCATGTGTGCCAGTagatgaaaaaaagacaagaggaGCAGTACAAAGTTGTGCTGCACGCCTCCTTCCAATAACTGCTTCTTCCAATGGATGTCAGGGTATCATAAACAACATGAGACAAGATGATGTGTCCTTTCACATCAGAAGTGATTCTTTGATTTGCAAATATGGAGAGTCACTCTATGCAAAACACGGCCGTGTGAAGTCCAGGCACCAGTACATTGCACAAAGGATGAGGGAGCTTGGCCGATTCATGTTGGCTGCTAAAGCTATGGACAAAACAGTGAGGAGTCTGGAAGATGTATGTGCACCATCAAAATTTCAGCTTGTTGTCAGTGCAGTAAAGCGGCTTACCGAGTTTAGTCCAGGCAAAAATGAGTATGGGAAACCTTCAACAGCGGTTAAAATTGGATTCTGTCTTAAAGGAGCTGCAGAGGTACAGATTGGGCAGGCTCTTATGCATGATGATGATCAGGCAGAGAAGAAGGCAAAAAAGTTCTTGGAACTTTTGGAACGAAACTGGAGAAACAATGTTTCTGTCAGTGCTCACCAAACTATCCAAGAAAAGAGATGGAATAAAAAAGAGGACATCCCCCTCACCAAAAATGTGATTGCGCTGAGGGATTATCTCAGGATGGTAGAAGACAAAGCAAGAGGGGAATTGAGGCAACAGCTGAGTTTAACAGCATACAAGACACTAAATGAGACAGTACTAGCACAGGTCATCGTCTTCAACAAGCGACGTGAAGGGGAAGCATCACGCTTGACACTTGAAGCCTACAAGAAAGGAAGCACAAATCCCATAAACGAGGACATTTATGTAACCCTGTCACCACTGGAGAAAGAGCTGAGCAAGCGATTAACTCGCATAGAAGTACGCggaaaaagagggagaaaggTACCTGTTTTCTTGACAGACAAAATGAGGGAGTCCATAGACTTGTTGATTAAAAGGAGAGATGAAGCTGGTGTTCTTGCTGAAAATCCCTATCTCTTTGCAAGACCCGGTGTGATGACGCACATACGAGGGTGTGACTGTCTGCGAAAATATGCAGAGAAAAGCGGAGCAGAAAACCCTGATCTCCTGAGGTCAACTAAATTAAGAAAACAGGTTGCCACACTCTGCCAACTGCTGGATCTGAGTGAACAAGAGCTAGAACAAGTTGCAAGGTTCATGGGGCATGACATCAGAGTCCACCGTGACTTTTACAGACAGACcgacaaaacatttcaaattgcCAAGATAAGCAAGCTTCTATTTGCAATGGAACAAGGTGCCTCCACCTTCACGGGAAAGAACCTTGATACAATTGATCTTTCTGTCTGTGGTAAATGTCCCACATCGACTTCTGAGAGTGTCCCACAGAGAAAACGGAAACAAGTTAACGAGGTGGATGAAGATCAGAGTCCAGAAAAAAGCTTGGTGAAGAGGCCCTCACAGAAGAAGAACAGATGTAAAACTGTCCAAAACAGTGTAAGCAATGGATGGAGGTTCTGACCTCTTCTCCCCCAAAAGGAGACTGGAGCCCCTCAGTGAGGATGGGAGTTCAGGT
>XM_039804732.1
GAAGAGGCCCTCACAGAAGAAGAACAGATGTAAAACTGTCCAAAACAGTGTAAGCAATGGATGGAGGTTCTGACCTCTTCTCCCCCAAAAGGAGACTGGAGCCCCTCAGTGAGGATGGGAGTTCAGGTGTAGATGATCAGAGTCCAGAAAAAAGCTTGGTGAAGAGGCcctcacagaagaagaaaagatgtaaaatgtccaaaacagtGGAAGCAATGGtgCCACCCATAGTAAAGGTGAGGAGACCATGGAGTGAAGCAGAGAGGAGTGCGGTAAACAAACACATGGCAAAGTTTATTGCAGAGCGCCGCGTTCCAGGTAAAGAACACTGCATGCGATGCATAAAAGAGGAGGAAGCCTTGGGTAAAAGATCCTGGAAGGATGTAAAGAACTTTGTGTacaacacaaatgtcacattaaaCCGGAGGAGTGCTACAAGGCAGCTTCACTTTTGACAATCTTTATTGTGCAATATAATGTTATGTTCTAGTTGATGTCTGCTGCAGTTCTTTTGATGCTTTGTGCAGTAGTGTTCAAGTGGTGTTTCAAAACATAGAaataagtagggttgggcatcgtttggatattaacgattctgatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107866 False 224 lncRNA 0.50 3 41688661 41690944
XM_039804729.1 True 2714 mRNA 0.43 6 41682413 41693005
XM_039804730.1 False 2347 mRNA 0.43 4 41684777 41688729
XM_039804732.1 False 601 mRNA 0.44 4 41688511 41693005

Neighbor

gene id symbol gene type direction distance location
LOC120562406 NA coding upstream 105910 41551091 ~ 41576503 (+)
LOC120562396 NA coding upstream 136819 41541090 ~ 41545594 (+)
LOC120562404 NA coding upstream 180754 41500185 ~ 41501659 (+)
LOC120562390 NA coding upstream 362709 41239083 ~ 41319704 (+)
LOC120562388 NA coding upstream 388032 41220084 ~ 41294381 (+)
LOC120561585 NA coding downstream 34561 41727566 ~ 41850702 (+)
LOC120562755 NA coding downstream 834491 42527496 ~ 42529482 (+)
LOC120562768 NA coding downstream 970513 42663518 ~ 42666003 (+)
LOC120562762 LOC104963449 coding downstream 1071398 42764403 ~ 42768664 (+)
LOC120562761 LOC104963449 coding downstream 1094704 42787709 ~ 42800596 (+)
G80376 NA non-coding upstream 31463 41650507 ~ 41650950 (+)
G80365 NA non-coding upstream 65047 41616909 ~ 41617366 (+)
G80364 NA non-coding upstream 67152 41614100 ~ 41615261 (+)
G80299 NA non-coding upstream 84260 41215521 ~ 41598153 (+)
LOC120562420 NA non-coding upstream 142821 41539010 ~ 41539592 (+)
LOC120561593 NA non-coding downstream 18650 41711655 ~ 41717691 (+)
LOC120561592 NA non-coding downstream 71796 41764801 ~ 41768650 (+)
G80402 NA non-coding downstream 185756 41878761 ~ 41879073 (+)
G80405 NA non-coding downstream 202913 41895918 ~ 41999125 (+)
G80406 NA non-coding downstream 226462 41919467 ~ 42422688 (+)
G80337 NA other upstream 226055 41421356 ~ 41456358 (+)
LOC120562389 NA other upstream 289187 41377447 ~ 41393226 (+)
G80320 NA other upstream 322207 41356480 ~ 41360206 (+)
polr3glb NA other upstream 495468 41156474 ~ 41186945 (+)
LOC120562400 NA other upstream 669794 41007967 ~ 41012619 (+)
G80410 NA other downstream 246493 41939498 ~ 42006594 (+)
G80682 NA other downstream 792330 42485335 ~ 42486009 (+)
LOC120562757 LOC104947480 other downstream 839919 42532924 ~ 42539601 (+)
LOC120562767 NA other downstream 939402 42632407 ~ 42643990 (+)
LOC120562772 NA other downstream 1090490 42783495 ~ 42786405 (+)

Expression


Co-expression Network