G80409


Basic Information

Item Value
gene id G80409
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42046678 ~ 42395787 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU107903
gttcaattcaattcaattttatttatagtatcaaatcataacataggttatctcgagacactttacagatagagtaggtctagaccacactctataatttacaaagccccaacaattacaagttcatggcatagtagggcacagcagagcatggcaaggtgtagcaggacgtagcagggcatagcagcaGGGCGCGGAGCAGGACCACCGGGACAGCTGTAACCATGATTTACAGTATGTGCCACCCTAATCCCAGGAAACCTGCTCGTGTTGCATCATTTATTTACTGTGTTTTAAGATGTATTTAATGGGCATATTTATTTGTTGTatgtctgtatttatttattaatttatttattattgaataAAATGTCATTCCATGTAAGTATGGGTCTACTGTTACTTTCAGTTATGTGTGTATCCACAGGAATAAGTCTGTTCATTAATCATTATCAATATATGAATTTAATCTCAGCGCTACTTTTGGACAGGGTACtttgaattaattaatttacaTTGTGTCATAGGGCTACTTGCACCTGCTGCATCATGACGCTTTTTTAAAAGTGATTTCTTTGCTAAACCAGCTAATAAAACAACAGCATTTCAGTTACACatagttatattttatttttaaagattgtattttttggatttattttcacaggtcatctgaagacatgaaaaaggagagagagaggggggaaatgacatgcagcaaagggccggaggtcggagtcgaacctgggcacgctgcgtcaaggactgaacctctacatatgggcgcccACTTCACTTTTATTATTGACAGTAGTTTGACAAAAGCTTAAAATATCTGCTTTATTACTGCTGCTGGTGACATAAATTGATCTACATGAGAGTATATATTCTGAATGACAACCAAAATAACAGTAATCAGTGTCTATTTTTAACAAAGACAATGAGTTTCAAAGGTGCTGTAGGTGGGAtggtgaagatccaggacttagccaaaacatttgaacatcaacaacttctcagtccctcccccttttctgctaaagcccaaaatgttcTCCTAAGGCCCTCCCCCtgcaagggagaatgaatgcatgtgcatgagcagtgattgacacgcagttagacacccttcctggccctgattggtgcatctcaacagggagcggtggatttttgccaatcacactccaggctgtaggtggtgccagaggagctggattttttttaaatgacctgcttcatgtagttctactcgaacatagggtcagtttcgttacatatgacagaaagttacatttataaggcttacctactgcacctttaagaccATTACAttttaatcaattcAGTGCAACATTGAAAGCCATCATATCCCATAGTGGGAATGATTTACATAATAAGAATGATGcaaaattaataatttttttaaattaacattttcttttcttgagtTTCACTACTGCTGACACCCAAAGATTTGGTACAGTTGAACCATGTCCTCCATGCCCAAACAGGTATTTCTGTGTTCCTGGTTTTGACACTCATCTTTTGTGGGCCAGTACTCGATCCAGGTTCTCTCTCCAAGCACATACTGAGACCTGAGGAAAGCACAgtgaaaaatacacattt
>TU107908
AAAGTCCTGCTCCAACCAGCCTCCATGAGAGAAACAAGCCCTTTAAGTAACCaagtcaaaatgtatttaaatatagcacttttcacacataaaaaaagaattaaaagtgCATAAAACATATTCCTACAACATGATACATATGAACACAAAGTTAAAATCAATTAAGCTGCGCTCCAACCAGACCTCATGAAAAAAAACGGGCGATTTAAGCTCCGTtccctttcatttcatttccataTTATAGAATATTTGTTAATTTGACATTCATCAACAGCAAAGTCAACGAGCCAGAGTTAGCTCAGCAGGTTAATTACCATCTGTTGTTTAAAAATggcttacaaaaaaataaaaataaaaaatacaataaaatgtcagCACGTAAAAGCAACAGACACAGCTCCAACCAGACTTCATGAGAAAAACGGGCGATTTAAGCAGCTGAGACAAACAGAAGctgcagaatgtgtgtgtgcgagagagagagagtgtaggtgtgtgtgtgtgtgtgtgtgagtctctgtgtgtgcgtatgtctgtgtgtgtgtgtttgtgtgtgtctcacccATGTTGTCCTGATGAGAGGCTGCAGGTTTTCTGGACTCTGTCAGCTCAGCTGTGAATGAACTGGGACAGGGGCAGAGTTGAACTGCTTTCATATCAGagcacagccaatcagagaaggagggggcggggcttacaCACTGCCCAGACAAGCCTGCATGTTAACCCTCCAGAGCCCAGAGAGAACCAGAACCACCATGGACCCCTAGGACAGACTTTAGACATTTTCTCACTTATTTTCAAGTTCTCTCAATGTTTCTAcgtttgtgtctgtatttggCTTCTGACCGCTACTTAAACACATCCCAGTGTGTCTTGAACCCcccttttatttctctctggGGGGTGGACCCTTAACCTACAGCTTATAAGAAAGCaacagaaatgttgaaaaagtgactaaaatgtacccaaaaaagcccaaaacgtgacaaaaatattgaaaataaatgacaataatgttgacaaaacatacaaaagaaacagaaaaagtttcTAAAATCCCATCTAAAGCGTGTTCTGGTAAGTGAAGCCAATACTGAagtaaaaaagcatcaaaaacatcgtaaaaaacatgaaaataacaaCATAAATGACACAAAATCCCATCCAAAGacttaaagggcaactattataaAGCATTTTCTGGATAATACTTGTATTtagtgtttgtactagaacatgtttacatgctttaatgtttatttttctcatacagCCCACCTGTGTCTGAcaggaaaggatccctacagagatagaccttttaaacctctttgagacctttctgtttaaccagaaacagctctgaggtcgctatcgctaaacccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccaccatatttccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccacatgtaaatgggtgaattaagggtttatttcagccaaaccagagtggtgattgttggaacagtggaaagatgaaccaagacggcttttggtagttttatttagtttctgtccactttgaatgaagtgtgttttacgatgataaaagtcctgattatttacatggagtctggtgggtttaccGAACGCAAGTTCTCTGAtgtctttgtttaaaaaaacatctaactctttaacaaaaatgtctctttgtcagcggcaaaaacagaacttttgtgAATGTAAATACAAGCTGTACAACTGAACTTATCATCACAGctcggttctggtttaatactggaccagtttcacagattgttgttcacaACAGACACTCAAGACACACAaaaggtagttaccctttaagcccCGCCTCTGTAAAAGccaagtctgctctgattggccagagtGGCAGGAAGTGTACTGAGTGTCCCAGTTTGACCCGACAGGCAGAGATGTgatgattattaataattaatctTCAGAGGAATCTGTCACGCTGTGTGTTCCTGCACAATCGGTTTCATCTGACCTACATACTgtcaccaaacacacacacagacacacacactctgttggTCTCTGTAGGACACAGGGGGCTATGTGTCAGGGGGCGGGGCTTCTGGGTCTCCAGTCCCAAATGTTTGATGGTTTGAGGTGAAAAGATCGATAAAACGTCATCAAAGAAAGCTAAAAAGAAGCTccagaaacacaacaaaagagccgaaagtgttgaaaaaaagcccgtcaacaaattaaaacttataagaaatatattgttgtaaataaaaacaggagaaCCAATCAGAAGCGTCAGAAAAAACATCAAACTTTACTAAAAAACATGCAAAGCAACATGAATATTATTCAACATATAGCCGAACTTTTTACAGAAAATATCAGATGTTACCCCCCCAATGTGtatgcgtctgtctgtctgtgtgtatgtgtctctgtgtttgtgtgtctgtgtgtgtctctgtgtatgtgtgtgtctctgtgtttgtgtgtctgtgtgcatctgtctctctgtgtgtggctgtgtatgtgtctctatttgtttgtgtgtctctgtatgtgtgtgtgtctgtgtgtgtgtctgtgtgttgacaTCTGAGTACAGAAAGAAGCAGTCTCTTAAAAAACTGTTTAATTTATCTTTTTGTcagaacatttcactttaagtGACAAACACAGAAGCTGGAAAtcagtgaaatattcctttgACATGTTTCAGTGTTTTAAATGTACATATCTTTTATTCCACCAGACTTTTACTTCAACAATGGTTGTTTCATGATTTTAACACTACAGCTAgtagccccgaaatcaccatcaccaaaccacaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcggttGTAtaagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccacatgtaaatgggtgaattaagggtttatttcaaccaaaccagagtggtgattgttggaacagtggaacaTAGAGTCCATTAGTCTGAGCCTGGTGTGTTGAGCTGTGTTGTGTAGTTTCCGTAGATTACAGGGACAACTGGTTTTGTCTTCAGCTTCGGTCCATCCTGTCCTCTCACAAAAAGTCGATCACTCAGATACTAAAAcatgggaacacacacacacacacatatatatatatatatacacatatatatatataaaccccAAAGTTACGCTTATCCCTCCTGTTGTTCTTGGATCAAATCTGACctgttttcaaaaagtttctacatcagaaatttggcTTTCTTTAACCAAATATTAACACAAAATAATGTGAATGGTTCCGTACAACGCTCTGCAcaagttttattcaatttcatagcattaaaacaaaataaaataaatgtaatacaagatgaacaaaaatgtcgggaaaagcttcaaaaacgtggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107903 False 1629 lncRNA 0.39 2 42110992 42395787
TU107908 True 3895 lncRNA 0.39 2 42046678 42050686

Neighbor

gene id symbol gene type direction distance location
LOC120561585 NA coding upstream 195976 41727566 ~ 41850702 (+)
LOC120562406 NA coding upstream 470175 41551091 ~ 41576503 (+)
LOC120562396 NA coding upstream 501084 41541090 ~ 41545594 (+)
LOC120562404 NA coding upstream 545019 41500185 ~ 41501659 (+)
LOC120562390 NA coding upstream 726974 41239083 ~ 41319704 (+)
LOC120562755 NA coding downstream 131709 42527496 ~ 42529482 (+)
LOC120562768 NA coding downstream 267731 42663518 ~ 42666003 (+)
LOC120562762 LOC104963449 coding downstream 368616 42764403 ~ 42768664 (+)
LOC120562761 LOC104963449 coding downstream 391922 42787709 ~ 42800596 (+)
LOC120562763 LOC106675675,LOC106675676 coding downstream 429811 42825598 ~ 42831659 (+)
G80432 NA non-coding upstream 392 42045608 ~ 42046286 (+)
G80414 NA non-coding upstream 47396 41946689 ~ 41999282 (+)
G80405 NA non-coding upstream 47553 41895918 ~ 41999125 (+)
G80407 NA non-coding upstream 118914 41927458 ~ 41927764 (+)
G80402 NA non-coding upstream 167605 41878761 ~ 41879073 (+)
G80695 NA non-coding downstream 165529 42561316 ~ 42561622 (+)
G80702 NA non-coding downstream 178207 42573994 ~ 42980107 (+)
LOC120562770 NA non-coding downstream 178274 42574061 ~ 42575485 (+)
G80711 NA non-coding downstream 221873 42617660 ~ 42622605 (+)
G80713 NA non-coding downstream 280150 42675937 ~ 42770719 (+)
G80410 NA other upstream 40084 41939498 ~ 42006594 (+)
LOC120561589 NA other upstream 353673 41682413 ~ 41693005 (+)
G80337 NA other upstream 590320 41421356 ~ 41456358 (+)
LOC120562389 NA other upstream 653452 41377447 ~ 41393226 (+)
G80320 NA other upstream 686472 41356480 ~ 41360206 (+)
G80682 NA other downstream 89548 42485335 ~ 42486009 (+)
LOC120562757 LOC104947480 other downstream 137137 42532924 ~ 42539601 (+)
LOC120562767 NA other downstream 236620 42632407 ~ 42643990 (+)
LOC120562772 NA other downstream 387708 42783495 ~ 42786405 (+)

Expression


Co-expression Network