LOC120562413


Basic Information

Item Value
gene id LOC120562413
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41209030 ~ 41210646 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU108069
GGCTGGTTGCCAGTCTTCCTGTCATTTAAGCTGTGTCTGCTTGGTTTAAAATGTAGAGTTTTGTGAGGTGGAGGTTGAGGACCTTAGTTATCAGGATTTACACCTGGGAGCCAGAGAATGGACTGGCTGTTGGATATAAAAAAAGGACAGAATAGCAGCAGAGGAGACATCAAGGAAGACGTGGAGATACGACAGAACACTCGGAACAAGCGGCGAAGCAGATGGGAGAtcagacaaagacacaaagggaaACAACCTTAGAGCGGCCTGAAGCTACAGTGAAGCAACCCAAACACCGACCGCCAGCGGAAAAAGTGGGGGAGTGTGGAACTCTCCCTTCCGCGTAAGTCCCGTTTTGAGACCGGTGTTAGGTGGGGATAAACGTGATTAAGTGATAACAGTTGCTGAGGACGTGTTACTGGCCGAGTTTTTTCTGTTGCAGGTTATATCCGAGGAAGGCGGCACAAGGAGAGGAAACTGGTTGCCAGCAGAACCCTGTGGACTTTGTAAAGTCAAGACTCCTGTTCTGTTTAGACTGTTTTAGttgatttttagtttttttcttttttttaaatcccttttttttagtacattttattgttttatccttgttaaaataaatgtggtTTCTTAACttgttttattcattgttttgaATACACCGTTTTTACTGCTCTCCCCGGACCAAAGGACCTG
>XR_005639780.1
CTGGCTGGTTGCCAGTCTTCCTGTCATTTAAGCTGTGTCTGCTTGGTTTAAAATGTAGAGTTTTGTGAGGTGGAGGTTGAGGACCTTAGTTATCAGGATTTACACCTGGGAGCCAGAGAATGGACTGGCTGTTGGATATAAAAAAAGGACAGAATAGCAGCAGAGGAGACATCAAGGAAGACGTGGAGATACGACAGAACACTCGGAACAAGCGGCGAAGCAGATGGGAGAtcagacaaagacacaaagggaaACAACCTTAGAGCGGCCTGAAGCTACAGTGAAGCAACCCAAACACCGACCGCCAGCGGAAAAAGTGGGGGAGTGTGGAACTCTCCCTTCCGCGTAAGTCCCGTTTTGAGACCGGTGTTAGGTGGGGATAAACGTGATTAAGTGATAACAGTTGCTGAGGACGTGTTACTGGCCGAGTTTTTTCTGTTGCAGGTTATATCCGAGGAAGGCGGCACAAGGAGAGGAAACTGGTTGCCAGCAGAACCCTGTGGACTTTGTAAAGTCAAGACTCCTGTTCTGTTTAGACTGTTTTAGttgatttttagtttttttcttttttttaaatcccttttttttagtacattttattgttttatccttgttaaaataaatgtggtTTCTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108069 True 696 lncRNA 0.44 2 41209030 41210644
XR_005639780.1 False 636 lncRNA 0.44 2 41209092 41210646

Neighbor

gene id symbol gene type direction distance location
LOC120562403 NA coding downstream 320276 40884121 ~ 40888754 (-)
LOC120562399 NA coding downstream 392475 40811235 ~ 40816555 (-)
pmvk pmvk coding downstream 721684 40480066 ~ 40487346 (-)
tmem79b NA coding downstream 844846 40354634 ~ 40364184 (-)
LOC120562375 NA coding downstream 956876 40245385 ~ 40252154 (-)
LOC120562505 LOC100690881,LOC102207812,LOC101474950 coding upstream 189164 41399810 ~ 41409787 (-)
myo1eb LOC104937078,LOC101474664,LOC102208361,LOC100691416,LOC102308324 coding upstream 404263 41614909 ~ 41660714 (-)
selenbp1 selenbp1 coding upstream 793206 42003852 ~ 42047544 (-)
LOC120562508 NA coding upstream 841329 42051975 ~ 42057548 (-)
LOC120562764 NA coding upstream 1409257 42619903 ~ 42623838 (-)
G80526 LOC108281047 non-coding downstream 6799 41201771 ~ 41202231 (-)
G80512 NA non-coding downstream 22800 41157964 ~ 41186230 (-)
G80510 NA non-coding downstream 25131 41156998 ~ 41183899 (-)
G80507 NA non-coding downstream 111305 41097012 ~ 41097725 (-)
G80497 NA non-coding downstream 223680 40985050 ~ 40985350 (-)
G80557 NA non-coding upstream 136449 41347095 ~ 41435161 (-)
G80558 NA non-coding upstream 151519 41362165 ~ 41363810 (-)
G80568 NA non-coding upstream 201821 41412467 ~ 41456358 (-)
G80572 NA non-coding upstream 210631 41421277 ~ 41502269 (-)
G80580 NA non-coding upstream 281408 41492054 ~ 41492753 (-)
G80498 NA other downstream 104936 41103243 ~ 41104094 (-)
G80488 NA other downstream 191838 41015850 ~ 41017192 (-)
LOC120562415 NA other downstream 443563 40678343 ~ 40765467 (-)
G80186 NA other downstream 711434 40492323 ~ 40497596 (-)
G80129 NA other downstream 901507 40222367 ~ 40307523 (-)
LOC120562506 NA other upstream 202307 41412953 ~ 41421025 (-)
LOC120562392 LOC103132156,LOC108243373 other upstream 222395 41433041 ~ 41605388 (-)
LOC120562507 LOC105890369,LOC107379007,LOC105018870,LOC105012700,LOC103477466,LOC103369594 other upstream 427491 41638137 ~ 41998854 (-)
G80637 NA other upstream 889543 42100189 ~ 42108573 (-)
LOC120562509 c3-2,LOC102208541,LOC102799596,LOC100692186 other upstream 900334 42110980 ~ 42453873 (-)

Expression


Co-expression Network