G80557


Basic Information

Item Value
gene id G80557
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41347095 ~ 41435161 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU108133
ctctgtctctctgtctctctgtctctctctctgtctctctctctctgtctctctctctctctgtctctctctctgtctcttgtctctctgtctctgtctctctgtctctgtctctctctctctctctctctgtctctctctctctgtctctctgtctctctctctctgtctctctctctctgtctctctgtctctctctctctctgtctctctgtctctctctctctgtctctctctctctctctctctctctg
>TU108134
ctctgtctctctgtctctctgtctctctctctgtctctctctctctgtctctctctctctctgtctctctctctgtctctctctctctgtctctctctctctgtctctctgtctctctctctctctgtctctctgtctctctctctctgtctctctctctctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctctctctctctctctctctg
>TU108135
tacattaaactgaacatttctgttgacggtgaagtgagacacggtgaatggcttctttgggaatatttatctctctccctctctctctctctctctctctgtctgtctctctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctctctgtctctctctctctctctctctctctgtctctctctctctctctctctctgtctctctgtctgtctctctgtctctctctctctctctctctctctctgtgtctctctctctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctgtctctctctctctctctgtctgtctctcattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108133 False 254 lncRNA 0.50 2 41347095 41435161
TU108134 False 229 lncRNA 0.50 4 41347095 41435161
TU108135 True 365 lncRNA 0.48 2 41366381 41434546

Neighbor

gene id symbol gene type direction distance location
LOC120562403 NA coding downstream 458341 40884121 ~ 40888754 (-)
LOC120562399 NA coding downstream 530540 40811235 ~ 40816555 (-)
pmvk pmvk coding downstream 859749 40480066 ~ 40487346 (-)
tmem79b NA coding downstream 982911 40354634 ~ 40364184 (-)
LOC120562375 NA coding downstream 1094941 40245385 ~ 40252154 (-)
myo1eb LOC104937078,LOC101474664,LOC102208361,LOC100691416,LOC102308324 coding upstream 179748 41614909 ~ 41660714 (-)
selenbp1 selenbp1 coding upstream 568691 42003852 ~ 42047544 (-)
LOC120562508 NA coding upstream 616814 42051975 ~ 42057548 (-)
LOC120562764 NA coding upstream 1184742 42619903 ~ 42623838 (-)
LOC120562512 NA coding upstream 1214288 42649449 ~ 42656684 (-)
G80508 NA non-coding downstream 92878 41186453 ~ 41254217 (-)
LOC120562413 NA non-coding downstream 136449 41209030 ~ 41210646 (-)
G80526 LOC108281047 non-coding downstream 144864 41201771 ~ 41202231 (-)
G80512 NA non-coding downstream 160865 41157964 ~ 41186230 (-)
G80510 NA non-coding downstream 163196 41156998 ~ 41183899 (-)
G80580 NA non-coding upstream 56893 41492054 ~ 41492753 (-)
G80603 NA non-coding upstream 175820 41610981 ~ 41611190 (-)
G80578 NA non-coding upstream 227356 41662517 ~ 41666764 (-)
G80607 NA non-coding upstream 235726 41670887 ~ 41671967 (-)
G80620 NA non-coding upstream 413183 41848344 ~ 41848646 (-)
G80498 NA other downstream 243001 41103243 ~ 41104094 (-)
G80488 NA other downstream 329903 41015850 ~ 41017192 (-)
LOC120562415 NA other downstream 581628 40678343 ~ 40765467 (-)
G80186 NA other downstream 849499 40492323 ~ 40497596 (-)
G80129 NA other downstream 1039572 40222367 ~ 40307523 (-)
LOC120562507 LOC105890369,LOC107379007,LOC105018870,LOC105012700,LOC103477466,LOC103369594 other upstream 202976 41638137 ~ 41998854 (-)
G80637 NA other upstream 665028 42100189 ~ 42108573 (-)
LOC120562509 c3-2,LOC102208541,LOC102799596,LOC100692186 other upstream 675819 42110980 ~ 42453873 (-)
LOC120562510 NA other upstream 938957 42374118 ~ 42387280 (-)
G80778 NA other upstream 1240780 42675941 ~ 42770763 (-)

Expression


Co-expression Network