G80558


Basic Information

Item Value
gene id G80558
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41362165 ~ 41363810 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU108136
TCTTTATTAAtcactacacacatacacacatctctttattaatcactacacacatctctttattaatcactacacacatacacacatctctttattaatcactacacacatctctttattaatcactacacacatacacacatctctttattaatcactacacacatctctttattaatcactacacacatacacacatctctttattaatcactacacacatctctttattaatcactacacacatacacacatctcttTATTAATCACTACAAATACTAACTAATACACTTCTATTAATCACTACACACATCTCTTATTAATCACTACACACATCTCTATTAATCACTACACACATCTCTTTATTAATCACTACACACATCTCTTTATTAATCACTACACACATCTCTTTATTAATCACTACACACATCTCTTTATTAATCACTACACACATCTCTTTATTAATCACTACACACATCTCTTTATTAATCACTACACACATCTCTTTATTAATCACTACACACATCTCTATTAATCAATACACACATCTCTTTATTAATCACTACACACATCTCTTTATTAATCACTACAAACAGCGCCTCTTTGTCG

Function

GO: NA

KEGG:

id description
ko04136 Autophagy - other

RNA

RNA id representative length rna type GC content exon number start site end site
TU108136 True 609 lncRNA 0.30 2 41362165 41363810

Neighbor

gene id symbol gene type direction distance location
LOC120562403 NA coding downstream 473411 40884121 ~ 40888754 (-)
LOC120562399 NA coding downstream 545610 40811235 ~ 40816555 (-)
pmvk pmvk coding downstream 874819 40480066 ~ 40487346 (-)
tmem79b NA coding downstream 997981 40354634 ~ 40364184 (-)
LOC120562375 NA coding downstream 1110011 40245385 ~ 40252154 (-)
LOC120562505 LOC100690881,LOC102207812,LOC101474950 coding upstream 36000 41399810 ~ 41409787 (-)
myo1eb LOC104937078,LOC101474664,LOC102208361,LOC100691416,LOC102308324 coding upstream 251099 41614909 ~ 41660714 (-)
selenbp1 selenbp1 coding upstream 640042 42003852 ~ 42047544 (-)
LOC120562508 NA coding upstream 688165 42051975 ~ 42057548 (-)
LOC120562764 NA coding upstream 1256093 42619903 ~ 42623838 (-)
G80508 NA non-coding downstream 107948 41186453 ~ 41254217 (-)
LOC120562413 NA non-coding downstream 151519 41209030 ~ 41210646 (-)
G80526 LOC108281047 non-coding downstream 159934 41201771 ~ 41202231 (-)
G80512 NA non-coding downstream 175935 41157964 ~ 41186230 (-)
G80510 NA non-coding downstream 178266 41156998 ~ 41183899 (-)
G80568 NA non-coding upstream 48657 41412467 ~ 41456358 (-)
G80572 NA non-coding upstream 57467 41421277 ~ 41502269 (-)
G80580 NA non-coding upstream 128244 41492054 ~ 41492753 (-)
G80603 NA non-coding upstream 247171 41610981 ~ 41611190 (-)
G80578 NA non-coding upstream 298707 41662517 ~ 41666764 (-)
G80498 NA other downstream 258071 41103243 ~ 41104094 (-)
G80488 NA other downstream 344973 41015850 ~ 41017192 (-)
LOC120562415 NA other downstream 596698 40678343 ~ 40765467 (-)
G80186 NA other downstream 864569 40492323 ~ 40497596 (-)
G80129 NA other downstream 1054642 40222367 ~ 40307523 (-)
LOC120562506 NA other upstream 49143 41412953 ~ 41421025 (-)
LOC120562392 LOC103132156,LOC108243373 other upstream 69231 41433041 ~ 41605388 (-)
LOC120562507 LOC105890369,LOC107379007,LOC105018870,LOC105012700,LOC103477466,LOC103369594 other upstream 274327 41638137 ~ 41998854 (-)
G80637 NA other upstream 736379 42100189 ~ 42108573 (-)
LOC120562509 c3-2,LOC102208541,LOC102799596,LOC100692186 other upstream 747170 42110980 ~ 42453873 (-)

Expression


Co-expression Network