G80711


Basic Information

Item Value
gene id G80711
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42617660 ~ 42622605 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU108401
GTTTATTTTGCAAGTATATAAGTACAGTAGATAGAAGCAAgtcaaagaaaaacaagaactgcaagcagttatgacggggcccaagcctctGAAGCAAACAttggtgaatatcgagaggtttgatgcacgaggtctgcggtactctgccgttgcaaatgtagtggttaacagttcatctctATGCATGTACAGATtacctttaacaattctctacaataaacaaacttcttaacccccctgaccacaggggacagcagagagaaatgagagagtgactgagagggtggaggggggtAGGCAagtgtggtggttgaaagagcaggggaggtggtcaggttgttgtaaatggtgtcataggcgcagatttattttttcgtccgtgggtgctcacaggcgcaagactttaaaaaaaaaagttttttagaaccgtaggaaatggacagcatcCGATGTgaacacacacgcctattaactcgataatttagccgtaaagtaggctttcaactcaggacagcgccacttctcacaaatacagattgGATTGGAGATGAAACCGCGAGCAGCTTcatgggaaattaagaatcaatgccaccaacataaccaatcacactatgacagacgctccactcagcaccaactgcaatgtttaaagtgatggttcggagtaatttcaccctgaaaagagatacaacaaaaatatttattaatttaacttttttttttaagtaagtgctgtagtataactagcaggagacaagttataattgaggtaagtttggagacattaccttatttaatccttaaattaataaatatttttgttgtatctatACAGCCCtaagcagtagcagcagcaacagagacgagaagccaacaggcaagtgttatttatataaacttctggtgtactccaatccatcgttttatgaatgcataacctatttgtactagtgtagaagtttggtatcattttgggtattattagtggggtcatttacgagatacaaacctggTAATgctactctatgctaactctcccaatgttcgacccagctgaaaaaagcttctgggggggtgtttggctcaaggtcatggtgcaaaggatcctagggtgaaattactccgaaccatcactttaattgcacttatgaatggtgttgattttggattgaaaaagtgggagaaaagagttacatttgtccacccgaaggttgtagaaactttgtcaggtgggttaagaagtttgtttattgtagaacaccaggggagcaaaaggtaaacatcagtaaatattgagaagtgtgagctgcaaagtctgtgatacattcccattgcaaatattccattaacattgattaaaaGGGCCAAAACACTTATAAGTTGATTAAAgtgccccctaatggccgatatttgccaaatttggtacagattcTCAGAGCGACATTCGTGTGAATTgcatttactgtggcagagatattgcaattgcaactttcccattgaaatgcattgacttattggccaaaacaaatacacgttgcttatagcgccccctaaaggctgATATATGCCAActttggtacagagcatcgtaGTGGGATGTTAAACAATGATCACAAGTtatttgctgataacatttaatttgggtgagatatgatatatgtgtgtggtagctagctaggaaaatttgtttgatcgtcaaatgcgcatactttGACGTAGCAAAATTCCTCGAGTAAATTTTCGTTacgtccatctggagatgctataACCAGGTTTTGTGCTGATCGGttgcacggcctaggacgagttcaaaaaagttggttttgcgcaTTGCGTGATAATATATCATGTGATTCAGCTTGGTGCAAGGAACAAGTGGATGTAAGGTGTTTTAAAGTGCGATGTATAATGTGGGagttaaaagcaaaaaaacgTTATAGTACCACcaagtggtccacatgtgtaatttttggtaggtgtggtccaggGCCAattgtccatctaccctgtacatttaaagttgttcacattagtgtaagtggtgaatatagacttgggtcccataggccacgcctaCTTTGACCCCTCAGTAGCCCACTGAAGGGTtggcctcaggagtggccctagatggtacccatcaaattttgtaaaaatcggatgagccgttcatgagataccAATCGGTTGCACGGTCTAGTAGAAcatcgaaaaagtaggttttgataagtctaggcagAAATGGGCGaggcctatatcacgtgattcagttggatccagggaacgcgtaGATCTATGGGTTTTGAATGTTcggtgtacggtgtgggagttatagggccaaacgtgTTTTTCCTGCTATatcgccacctagtggtggaagtggTTCAATTGTTGCGCCTGAAGTCCTTGCAGAGTTTCGGAcgagtcctgaaaatggcaaccccccaccatgtacggtttaggctgaaGTCAGAGTTTTATGCGGAGAAGAATAATaatgatggaggaggaggataaattaatccttagaaaaacaatacggttccacagccctgctgtgcgaaGGGCGTGGACCCCTAATTATTAGGGTTAGAATCTTTTTAGTGTTAGAATAAGTTTCATATTATACTGTCCCAGTGACTTCCACCTCACACAGTGTCAGGTATTCTTGTCTTCCAGGAATCACAATGTTGACATAACGACCTTTCATTCCATTACACACAAAGGTTTGGGAGGTCCCAGCTTTGATAGACGAGATAACAGCACat

Function

GO: NA

KEGG:

id description
ko00910 Nitrogen metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU108401 True 2765 lncRNA 0.41 3 42617660 42622605

Neighbor

gene id symbol gene type direction distance location
LOC120562755 NA coding upstream 88178 42527496 ~ 42529482 (+)
LOC120561585 NA coding upstream 766958 41727566 ~ 41850702 (+)
LOC120562406 NA coding upstream 1041157 41551091 ~ 41576503 (+)
LOC120562396 NA coding upstream 1072066 41541090 ~ 41545594 (+)
LOC120562404 NA coding upstream 1116001 41500185 ~ 41501659 (+)
LOC120562768 NA coding downstream 40913 42663518 ~ 42666003 (+)
LOC120562762 LOC104963449 coding downstream 141798 42764403 ~ 42768664 (+)
LOC120562761 LOC104963449 coding downstream 165104 42787709 ~ 42800596 (+)
LOC120562763 LOC106675675,LOC106675676 coding downstream 202993 42825598 ~ 42831659 (+)
LOC120562760 LOC103358480 coding downstream 284411 42907016 ~ 42912785 (+)
LOC120562770 NA non-coding upstream 42175 42574061 ~ 42575485 (+)
G80695 NA non-coding upstream 56038 42561316 ~ 42561622 (+)
G80473 NA non-coding upstream 138596 42362740 ~ 42479064 (+)
G80465 NA non-coding upstream 141406 42338528 ~ 42476254 (+)
G80476 NA non-coding upstream 168687 42374477 ~ 42448973 (+)
G80713 NA non-coding downstream 53332 42675937 ~ 42770719 (+)
G80714 NA non-coding downstream 54771 42677376 ~ 42677864 (+)
G80717 NA non-coding downstream 74020 42696625 ~ 42743653 (+)
LOC120562769 NA non-coding downstream 96811 42719416 ~ 42720854 (+)
G80719 NA non-coding downstream 118221 42740826 ~ 42758626 (+)
LOC120562757 LOC104947480 other upstream 78059 42532924 ~ 42539601 (+)
G80682 NA other upstream 131651 42485335 ~ 42486009 (+)
G80410 NA other upstream 611066 41939498 ~ 42006594 (+)
LOC120561589 NA other upstream 924655 41682413 ~ 41693005 (+)
G80337 NA other upstream 1161302 41421356 ~ 41456358 (+)
LOC120562767 NA other downstream 9802 42632407 ~ 42643990 (+)
LOC120562772 NA other downstream 160890 42783495 ~ 42786405 (+)

Expression


Co-expression Network