LOC120562767


Basic Information

Item Value
gene id LOC120562767
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42632407 ~ 42643990 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU108406
CTCACTGCTCAGGTAGAGTGGGGGAGGTGATAAGAAGGCAGAGTGAAGGGACAGAGGCACATGGAGAGCACACCAGCAGCACACTTAAACCATTTTTCTCCACAAGCAGgAAGCACATGATGCTGAAATTGAAAATGCAGTGAGAGGTCTTCTCAGCTGCATCCGGAACTTGAAAAAATCAAATACGGAGAGGCCTAGCAGTTCTGTTGACCTAAGGCCCATGGAATCTCAGGCTGGAACTAGCTGTTCCGTTGAGGTTAACAACCCTGTTCATCGGGAAATGCAAAGATCTTTTCCAGCAATATATGCTGGAAGCCGGGCACGCCATAAAAGAAAGGCACCTGAACCTCCAAGACCAACATGTTCGAAAGTAATAGAACTCCAGTTCTGCCTGCGGCCCGAAAACTCCGATAGGACACCAAAAGACGAAACCATGCTCCTGCAAGCGGGCTTAGGAAGGAGAACTGTACATCTTAATGACGATGCTGATCACACTGagTGACCGAGGAAAAACTCAAGCAGCTGGTAAAATTCTGGGTTGGCTGGGAGCTGCCCATGCAGGACATGCAAGTGGAGGTGGTGCAGGCAGACCATCCAACATCGTCCACCTGCTTCCATATCCTGCGCTTGCCTGGTTACTACACCAATTACCAAGAGTTCCATGATCATCTGGAAGGTTGCATTGCAACAAATGATACTGGG
>XM_039806658.1
TTTTGAACTTGTGGCAGAAGAGGAGAAAGACCAGGAACCAGATGTTATTTGTGTGGATTCTTGCCCAATATGTGGAGAGCAATTTGATGCTGAGGCGATGGCCCTCCATGCAAGTTCATGTGGGGAAAGCACCAGATGTTTCCACAAGCAGTGTCACTGAAAGCAGCCTTGCTAGCCCATCCAATTATGTGTACTTAACACCTGGCACATCACAAACCATACCAACAGGGCCAGTACCTGCAATGTCTGACgCCTGGAAGAGGGTTGAAGTTCCAGAGAGGGCAGCGATATTATACAGAAGGTATTTGCTACAGGAAAAAGAGGATGAACCAACACTGAAAGTAAGACTTGACATGAGAGAGGATGTTGAAGATCAGGAGGGAAGACTAATCAGCTTTTACAAGGTTTATAAAGTAGATTGGGCCAGACCACTCCATTGCAGATTGGAAGGTGATGTAGCAACTGGAGAGGGTGTGAAACGCCATTTCTTCAGCCTAGTGATGCACAAGTTGCAGAACGGATTCTTGATGGATTTTGGAAATAGAACAAGCACTATGCTTTTTGAGGGCCAAGCTGATCACCTCATCCCTTCCACCTCGCAAGTGCTTGTGCAGAGTGACTTGTTCAAGATGGCAGGGAGGATGATAGGTCACTCCTTTCTGCATGGTGGTCCTCCACTGACAGGTGTCAGCCCAGCAATTCTGCACGTTTTGTTAGGTGGCTCCCGGGAGACAGCAACCATCGTGCTGGAAGATGTGGCAGACATTGATATACGCGAGACAATACAGCTGCTTGAGAGGAAAACAAGCAGTGAGCTGACAGAGGATCAGAGGGCTGCTGTTAACCAGTTGGCATTATCTTGGGACCTTCCTGTGTTGACACAAGCCAACCATGTGTGGCTTTTACACAGTCTTCTACAGCATGCGGTGTTAGGGCGAACCTCCCAACAAGTGAAACAGCTGAGGCAGGGACTGCAGGACACAATGTTATGGCCACTGTTGGAGGCCAGGCCAGATGTGGTTCCAGTGGTGTTCCCTCATCAGTCTATGGCTAAATGCAGTGCTCAGATGGTTCTAGACAACATCATCTGGCCtggagaagaggaaaaggaggacGACAATGGATGCTCTGTTGCAATCAGATGCAAAATGGCTGGCTACCTACGTCAGTTTGTGGAGACAGTGACCGAGGAAAAACTCAAGCAGCTGGTAAAATTCTGGGTTGGCTGGGAGCTGCCCATGCAGGACATGCAAGTGGAGGTGGTGCAGGCAGACCATCCAACATCGTCCACCTGCTTCCATATCCTGCGCTTGCCTGGTTACTACACCAATTACCAAGAGTTCCATGATCATCTGGAAGGTTGCATTGCAACAAATGATACTGGACTAAGCAATGCACCTCAGTAATGGCATCATACACAGCTTGAGGGATCTCAAGCTGGCTGGATAGTGAGCTGAGTACAACTAGCTCCTGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108406 False 702 lncRNA 0.49 4 42632407 42640295
XM_039806658.1 True 1477 mRNA 0.49 11 42635825 42643990

Neighbor

gene id symbol gene type direction distance location
LOC120562755 NA coding upstream 102925 42527496 ~ 42529482 (+)
LOC120561585 NA coding upstream 781705 41727566 ~ 41850702 (+)
LOC120562406 NA coding upstream 1055904 41551091 ~ 41576503 (+)
LOC120562396 NA coding upstream 1086813 41541090 ~ 41545594 (+)
LOC120562404 NA coding upstream 1130748 41500185 ~ 41501659 (+)
LOC120562768 NA coding downstream 19528 42663518 ~ 42666003 (+)
LOC120562762 LOC104963449 coding downstream 120413 42764403 ~ 42768664 (+)
LOC120562761 LOC104963449 coding downstream 143719 42787709 ~ 42800596 (+)
LOC120562763 LOC106675675,LOC106675676 coding downstream 181608 42825598 ~ 42831659 (+)
LOC120562760 LOC103358480 coding downstream 263026 42907016 ~ 42912785 (+)
G80711 NA non-coding upstream 9802 42617660 ~ 42622605 (+)
LOC120562770 NA non-coding upstream 56922 42574061 ~ 42575485 (+)
G80695 NA non-coding upstream 70785 42561316 ~ 42561622 (+)
G80473 NA non-coding upstream 153343 42362740 ~ 42479064 (+)
G80465 NA non-coding upstream 156153 42338528 ~ 42476254 (+)
G80713 NA non-coding downstream 31947 42675937 ~ 42770719 (+)
G80714 NA non-coding downstream 33386 42677376 ~ 42677864 (+)
G80717 NA non-coding downstream 52635 42696625 ~ 42743653 (+)
LOC120562769 NA non-coding downstream 75426 42719416 ~ 42720854 (+)
G80719 NA non-coding downstream 96836 42740826 ~ 42758626 (+)
LOC120562757 LOC104947480 other upstream 92806 42532924 ~ 42539601 (+)
G80682 NA other upstream 146398 42485335 ~ 42486009 (+)
G80410 NA other upstream 625813 41939498 ~ 42006594 (+)
LOC120561589 NA other upstream 939402 41682413 ~ 41693005 (+)
G80337 NA other upstream 1176049 41421356 ~ 41456358 (+)
LOC120562772 NA other downstream 139505 42783495 ~ 42786405 (+)

Expression


Co-expression Network