LOC120562513 (LOC105920527,LOC103477479,LOC103369598,LOC106909307)


Basic Information

Item Value
gene id LOC120562513
gene name LOC105920527,LOC103477479,LOC103369598,LOC106909307
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42906534 ~ 42955865 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU108571
TTCTGACCTGCAGCGATGAGAGACGCGGCTGCTGGGGGGTTCCTGGTGGAGCCGTGGCCCGGTGGCGTCTCCGTGGAGACGGAGGCCGGCTGGGACGGTCTGGTGCTTCAGTGTGCTGCTCTGCTGGGACTCACTCTGATCGgtgtgtgtgtgttgaggcgGTGGATTGCAGGTGGAGTGTGTCGCTGTTCGGTTCGTCTGGATGGAAAGACAGTTCTGATCACCGGAGCAAACACCGGCATCGGCAAAGAGACGTGCCGCGACCTGGCAGCCAGAGgggcCCGGGTGGTGATGGCGTGCAGGGATCTGACCCGGGCAGAGCGTGCGGCGCAGGAAGTCCGCCAGTTGACAGGAAACAGAGACGTGGTGGTCCGACACCTGGACTTGTCCTCCGTCTACTCCGTCAGACAGTTCGCTAAAGACTTCCTGGACGGAGAGGACAGACTGGACATCCTCATCAACAACGCAggagtGATGATGTGTCCCCGATGGCTGACTGAAGATGGTTTTGAGACTCAGCTGGCTGTCAATCATCTGGGTCACTTCCTGCTGACCAATCTGCTGCTGCCGATGCTGCAGAGCTCCGCCCCCAGCCGCGTCATCATCGTGTCATCCATGGCCCACCGGGGGGgtcGCATCGACTTTGACGACTTGTTCTCCAGCAGCAAGACATACAGTTCTCTGGAGAGCTACAGACAGAGCAAACTGGCCAACGTCCTGTTCTGCAGAGAGCTCGGGCGACGACTCAGAGgctCCGGTGTGTCTGCGTTCTGTCTGCACCCCGGTGTGATCCGGACCGAGCTGGGCCGCCACGTTAGCGGCTGGTTCCCCCTGCTGGGGGCCCTGCTGGGCCTCCTGTCCCTCCTGTTCATGAAGACCCCCCGCCAGGGCAGCCAGACCACCGTGTACTGCGCCGTCACACCGGGACTGGAGGGGCAATCAGGACGCTACTTCAGCCACTGTGCatcacctccacctccc
>XM_039806219.1
CTCGGCTCAGTGTGTTCTGACCTGCAGCGATGAGAGACGCGGCTGCTGGGGGGTTCCTGGTGGAGCCGTGGCCCGGTGGCGTCTCCGTGGAGACGGAGGCCGGCTGGGACGGTCTGGTGCTTCAGTGTGCTGCTCTGCTGGGACTCACTCTGATCGgtgtgtgtgtgttgaggcgGTGGATTGCAGGTGGAGTGTGTCGCTGTTCGGTTCGTCTGGATGGAAAGACAGTTCTGATCACCGGAGCAAACACCGGCATCGGCAAAGAGACGTGCCGCGACCTGGCAGCCAGAGgggcCCGGGTGGTGATGGCGTGCAGGGATCTGACCCGGGCAGAGCGTGCGGCGCAGGAAGTCCGCCAGTTGACAGGAAACAGAGACGTGGTGGTCCGACACCTGGACTTGTCCTCCGTCTACTCCGTCAGACAGTTCGCTAAAGACTTCCTGGACGGAGAGGACAGACTGGACATCCTCATCAACAACGCAggagtGATGATGTGTCCCCGATGGCTGACTGAAGATGGTTTTGAGACTCAGCTGGCTGTCAATCATCTGGGTCACTTCCTGCTGACCAATCTGCTGCTGCCGATGCTGCAGAGCTCCGCCCCCAGCCGCGTCATCATCGTGTCATCCATGGCCCACCGGGGGGgtcGCATCGACTTTGACGACTTGTTCTCCAGCAGCAAGACATACAGTTCTCTGGAGAGCTACAGACAGAGCAAACTGGCCAACGTCCTGTTCTGCAGAGAGCTCGGGCGACGACTCAGAGgctCCGGTGTGTCTGCGTTCTGTCTGCACCCCGGTGTGATCCGGACCGAGCTGGGCCGCCACGTTAGCGGCTGGTTCCCCCTGCTGGGGGCCCTGCTGGGCCTCCTGTCCCTCCTGTTCATGAAGACCCCCCGCCAGGGCAGCCAGACCACCGTGTACTGCGCCGTCACACCGGGACTGGAGGGGCAATCAGGACGCTACTTCAGTGACtgtgcaggagctCCTCAGCTGACCCGGTTTATCAGAGCCTCAGCTGGTTGTCTGGCACTTCAGAGACTTTGCCGTTCCCGGCCGTCTCCCAGAGACTTTGCGGTGCCCGGCTTCCCAGAGACTCCTGCCCCCGTGTCCTGTTGGTGGCTTGGCACGACTCTTTTCCCCCGTGTCCTGTTGGTGGCTTGGCCGACTCCTGCCCCCCGTGTCCTGTTGGTGGACTCGCCGACTCTGCCTTGTTGCCAGTTACTGGTCCAATTACCTTGTTGGCGGACCCTGGCCCAGCTGACTCGTCGCCTGGCTCCAGCCGAGCTCCCCCTTCACCTGCTTGGCCTGCCTGACCTCCCGAGGGACTTAGCCTTTGCCGTGTTGTCCGGCCTCCTCAGGGGTTTCGTCTTCGTCGCCGACCTGAAGAGAGTCTTCGCGGTCCTGTCCGCCCTCCTGAAGGACTCAGCCTTCGCCGTCCTGCTTGGCATCCTGAGGGTTTCGCCATCGCTGCCGGTCTCCGGAGAGTCTTCACTGTCCTTCGCCACTGCCAGCAGCCCCAGTCCCAGAGCCTTGCTCCTGTTTTTGTTCGCCTTTCAGgtctttgtctcttgtcagatTATTTTGTTCGGTTTGCTGTGA

Function

NR:

description
retinol dehydrogenase 13-like isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108571 False 981 TUCP 0.62 7 42906534 42955851
XM_039806219.1 True 1601 mRNA 0.61 9 42934092 42955865

Neighbor

gene id symbol gene type direction distance location
LOC120562512 NA coding downstream 249850 42649449 ~ 42656684 (-)
LOC120562764 NA coding downstream 282696 42619903 ~ 42623838 (-)
LOC120562508 NA coding downstream 848986 42051975 ~ 42057548 (-)
selenbp1 selenbp1 coding downstream 858990 42003852 ~ 42047544 (-)
myo1eb LOC104937078,LOC101474664,LOC102208361,LOC100691416,LOC102308324 coding downstream 1245820 41614909 ~ 41660714 (-)
G80773 NA non-coding downstream 126067 42574820 ~ 42780467 (-)
G80779 NA non-coding downstream 163387 42688650 ~ 42743147 (-)
LOC120562759 NA non-coding downstream 364629 42540889 ~ 42541905 (-)
LOC120562756 NA non-coding downstream 395515 42507690 ~ 42511019 (-)
G80688 NA non-coding downstream 416752 42489532 ~ 42489782 (-)
LOC120562771 NA non-coding upstream 23630 42979495 ~ 42980915 (-)
LOC120562777 NA non-coding upstream 73364 43029229 ~ 43053521 (-)
LOC120562778 NA non-coding upstream 109283 43065148 ~ 43071469 (-)
G80778 NA other downstream 135771 42675941 ~ 42770763 (-)
LOC120562509 c3-2,LOC102208541,LOC102799596,LOC100692186 other downstream 452661 42110980 ~ 42453873 (-)
LOC120562510 NA other downstream 519254 42374118 ~ 42387280 (-)
G80637 NA other downstream 797961 42100189 ~ 42108573 (-)
LOC120562507 LOC105890369,LOC107379007,LOC105018870,LOC105012700,LOC103477466,LOC103369594 other downstream 907680 41638137 ~ 41998854 (-)

Expression


Co-expression Network