Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120562251 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 5707970 ~ 5708819 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0043412 | macromolecule modification | biological_process |
| GO:0006464 | cellular protein modification process | biological_process |
| GO:0036211 | protein modification process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU94802 | False | 302 | lncRNA | 0.51 | 3 | 5708211 | 5708693 |
| XR_005639721.1 | True | 522 | lncRNA | 0.48 | 4 | 5707970 | 5708819 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120562247 | NA | coding | upstream | 350676 | 5355807 ~ 5357294 (+) |
| LOC120562920 | mc5r,LOC101487483,LOC100693278,LOC102795483 | coding | upstream | 642297 | 4946358 ~ 5065673 (+) |
| cep192 | cep192 | coding | upstream | 1136661 | 4474006 ~ 4571309 (+) |
| seh1l | seh1l | coding | upstream | 1235303 | 4463437 ~ 4472667 (+) |
| LOC120561648 | LOC106523394 | coding | upstream | 1817912 | 3889015 ~ 3890058 (+) |
| LOC120561876 | NA | coding | downstream | 104058 | 5812877 ~ 5814642 (+) |
| tsnare1 | tsnare1,LOC101472715 | coding | downstream | 928033 | 6636852 ~ 6805600 (+) |
| LOC120562880 | NA | coding | downstream | 1295785 | 7004604 ~ 7029761 (+) |
| fzd1 | fzd1,LOC104958298,LOC104925482 | coding | downstream | 1587127 | 7295946 ~ 7298242 (+) |
| LOC120561797 | NA | coding | downstream | 1956419 | 7665238 ~ 7707591 (+) |
| G70861 | NA | non-coding | upstream | 32285 | 5675472 ~ 5675685 (+) |
| G70857 | NA | non-coding | upstream | 79133 | 5628566 ~ 5628837 (+) |
| G70848 | NA | non-coding | upstream | 159918 | 5547824 ~ 5548052 (+) |
| G70838 | NA | non-coding | upstream | 226798 | 5480911 ~ 5481172 (+) |
| G70837 | NA | non-coding | upstream | 227177 | 5480509 ~ 5480793 (+) |
| LOC120562254 | NA | non-coding | downstream | 8235 | 5717054 ~ 5717696 (+) |
| G70871 | NA | non-coding | downstream | 48831 | 5757650 ~ 5757989 (+) |
| G70873 | NA | non-coding | downstream | 58059 | 5766878 ~ 5767095 (+) |
| G70887 | NA | non-coding | downstream | 200547 | 5909366 ~ 5909585 (+) |
| G70893 | NA | non-coding | downstream | 225969 | 5934788 ~ 5935070 (+) |
| si:ch211-198c19.1 | NA | other | upstream | 113070 | 5591199 ~ 5594900 (+) |
| LOC120562244 | zdhhc3,LOC103364625,LOC101488043,LOC107102987 | other | upstream | 240880 | 5336214 ~ 5467090 (+) |
| LOC120562617 | ldlrad4 | other | upstream | 815913 | 4810388 ~ 4892057 (+) |
| G70654 | NA | other | upstream | 1041864 | 4665784 ~ 4666106 (+) |
| trnar-ucg_13 | NA | other | upstream | 1594689 | 4113209 ~ 4113281 (+) |
| G70894 | NA | other | downstream | 251636 | 5960455 ~ 5960854 (+) |
| cdk14 | cdk14 | other | downstream | 1330344 | 7039163 ~ 7292435 (+) |
| znrf2b | znrf2 | other | downstream | 1747948 | 7456767 ~ 7500182 (+) |
| G71147 | LOC103388722,LOC104941093,LOC103369890 | other | downstream | 2022203 | 7731022 ~ 7801380 (+) |
| G71309 | NA | other | downstream | 2412782 | 8121601 ~ 8122239 (+) |
