G70887


Basic Information

Item Value
gene id G70887
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 5909366 ~ 5909585 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU94828
cagagtgaaagagatatttacgcatcatattttagcgttgtagaaaattgatcttgatGGTAAATttcaaggcaaagagtacaactgttaatttgtgaaaatgattagtagcctaatccttgaatggtatgattatgacggtttcaattcagagcagtggttagttatgtttaggctgcttacgcattcagtcggtccgtgatcgtctgctgcGCTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU94828 True 220 lncRNA 0.37 1 5909366 5909585

Neighbor

gene id symbol gene type direction distance location
LOC120561876 NA coding upstream 94724 5812877 ~ 5814642 (+)
LOC120562247 NA coding upstream 552072 5355807 ~ 5357294 (+)
LOC120562920 mc5r,LOC101487483,LOC100693278,LOC102795483 coding upstream 843693 4946358 ~ 5065673 (+)
cep192 cep192 coding upstream 1338057 4474006 ~ 4571309 (+)
seh1l seh1l coding upstream 1436699 4463437 ~ 4472667 (+)
tsnare1 tsnare1,LOC101472715 coding downstream 727267 6636852 ~ 6805600 (+)
LOC120562880 NA coding downstream 1095019 7004604 ~ 7029761 (+)
fzd1 fzd1,LOC104958298,LOC104925482 coding downstream 1386361 7295946 ~ 7298242 (+)
LOC120561797 NA coding downstream 1755653 7665238 ~ 7707591 (+)
LOC120561799 NA coding downstream 1822241 7731826 ~ 7741034 (+)
G70873 NA non-coding upstream 142271 5766878 ~ 5767095 (+)
G70871 NA non-coding upstream 151377 5757650 ~ 5757989 (+)
LOC120562254 NA non-coding upstream 191670 5717054 ~ 5717696 (+)
LOC120562251 NA non-coding upstream 200547 5707970 ~ 5708819 (+)
G70861 NA non-coding upstream 233681 5675472 ~ 5675685 (+)
G70893 NA non-coding downstream 25203 5934788 ~ 5935070 (+)
G70901 NA non-coding downstream 115945 6025530 ~ 6026116 (+)
G70903 NA non-coding downstream 116796 6026381 ~ 6026643 (+)
G70907 NA non-coding downstream 194991 6104576 ~ 6104820 (+)
G70909 NA non-coding downstream 200011 6109596 ~ 6110041 (+)
si:ch211-198c19.1 NA other upstream 314466 5591199 ~ 5594900 (+)
LOC120562244 zdhhc3,LOC103364625,LOC101488043,LOC107102987 other upstream 442276 5336214 ~ 5467090 (+)
LOC120562617 ldlrad4 other upstream 1017309 4810388 ~ 4892057 (+)
G70654 NA other upstream 1243260 4665784 ~ 4666106 (+)
trnar-ucg_13 NA other upstream 1796085 4113209 ~ 4113281 (+)
G70894 NA other downstream 50870 5960455 ~ 5960854 (+)
cdk14 cdk14 other downstream 1129578 7039163 ~ 7292435 (+)
znrf2b znrf2 other downstream 1547182 7456767 ~ 7500182 (+)
G71147 LOC103388722,LOC104941093,LOC103369890 other downstream 1821437 7731022 ~ 7801380 (+)
G71309 NA other downstream 2212016 8121601 ~ 8122239 (+)

Expression


Co-expression Network