G71082


Basic Information

Item Value
gene id G71082
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 7510789 ~ 7521380 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU95087
cagggctccacactaactttttgccttggttgcactggtgcgcctaactttttttatttaggtgcaccagcacaaaatttaggtgcacccaaatttttcctcgcatcgccgtaaggctgaatggcgatacacgatatatagctctgtatttttttacaaagtgggctaaatgttcagttttaagtcaaagccacttttcacaagctcttttattaaaacagattgtgattaaaataaaatgcaaagacagggttttctttaccgtttgaaaatatacagctgcaacacatgtaaatgaaagttatctaaaataaatagcctgagaaagctccttcataagctttcaacaacaataacagactgattaaaagagagagaggaccccggatagctcagttggtaaatatagaggtttgactccgacctgcagccctttcctatatgacaggcatgaaaacgggtcaggggtgaaaaaggtgagaaggatattacccctctaggggggtccgggggcatgccccccccccccagaagaaaatttaattgtttttttaaaaatttaaattttaaaataaaattttaaatattccatattttaaagcatcaatctgatgcattttgagatgcattttttgccaaccaacagtgtaatatttcaatatgcactcattaaagttaatttgactggcaaaacagttaaagtccttctgacattacacaataataaaagtcatttttaaagactaaaaagttttggatacatttgtacttcttccaaccatatattaaataaagagtcaatgtggatttacatattgcaataatacagtgttgtaatgtaacggagtacaaatacttcgttactgtacttaagtagaaatttcacgtatctgtactttacttcgctatttaaatttatgtcaactttcacttttactccactacatttcctagataaaatgtatacttttactccgttatatttccactaagcatcttcattactcgttactaaaaaataaaattagacgaaatgtgtgcgactgcaataaggggggtttggcgaatcactgctcctagattgcattacgcacgctccgcacgccgcgcgctctatttcagcgcttgtttgttgcaaaccgccatggaagcacgagcacctactggaggacctcccgttatcgtagaccaccaggctcgacataagcaatggcccggggccagtaaaaacgtatgtcgggctggttgcagccacagtcactggtgtgggCG
>TU95088
atacagggctccacactaactttttgccttggttgcactggtgcgcctaactttttttatttaggtgcaccagcacaaaatttaggtgcacccaaatttttcctcgcatcgccgtaaggctgaatggcgatacacgatatatagctctgtatttttttacaaagtgggctaaatgttcagttttaagtcaaagccacttttcacaagctcttttattaaaacagattgtgattaaaataaaatgcaaagacagggttttctttaccgtttgaaaatatacagctgcaacacatgtaaatgaaagttatctaaaataaatagcctgagaaagctccttcataagctttcaacaacaataacagactgattaaaagagagagaggaccccggatagctcagttggtaaatatagaggtttgactccgacctgcagccctttcctatatgacaggcatgaaaacgggtcaggggtgaaaaaggtgagaaggatattacccctctaggggggtccgggggcatgccccccccccccagaagaaaatttaattgtttttttaaaaatttaaattttaaaataaaattttaaatattccatattttaaagcatcaatctgatgcattttgagatgcattttttgccaaccaacagtgtaatatttcaatatgcactcattaaagttaatttgactggcaaaacagttaaagtccttctgacattacacaataataaaagtcatttttaaagactaaaaagttttggatacatttgtacttcttccaaccatatattaaataaagagtcaatgtggatttacatattgcaataatacagtgttgtaatgtaacggagtacaaatacttcgttactgtacttaagtagaaatttcacgtatctgtactttacttcgctatttaaatttatgtcaactttcacttttactccactacatttcctagataaaatgtatacttttactccgttatatttccactaagcatcttcattactcgttactaaaaaataaaattagacgaaatgtgtgcgactgcaataaggggggtttggcgaatcactgctcctagattgcattacgcacgctccgcacgccgcgcgctctatttcagcgcttgtttgttgcaaaccgccatggaagcacgagcacctactggaggacctcccgttatcgtagaccaccaggctcgacataagcaatggcccggggccagtaaaaacgtatgtcgggctggttgcagccacagtcactggtgtgggCG
>TU95089
atacagggctccacactaactttttgccttggttgcactggtgcgcctaactttttttatttaggtgcaccagcacaaaatttaggtgcacccaaatttttcctcgcacGCCGTAACGCtgtgaatggcgatacacgatatatagctctgtatttttttacaaagtgggctaaatgttcagttttaagtcaaagccacttttcacaagctcttttattaaaacagattgtgattaaaataaaatgcaaagacagggttttctttaccgtttgaaaatatacagctgcaacacatgtaaatgaaagttatctaaaataaatagcctgagaaagctccttcataagctttcaacaacaataacagactgattaaaagagagagaggacgcccggatagctcagttggtaaatatagaggtttgactccgacctgcagccctttcctaTATGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95087 False 1272 lncRNA 0.39 2 7515431 7521380
TU95088 True 1275 lncRNA 0.38 3 7510789 7521380
TU95089 False 453 lncRNA 0.38 2 7510789 7515880

Neighbor

gene id symbol gene type direction distance location
fzd1 fzd1,LOC104958298,LOC104925482 coding upstream 212547 7295946 ~ 7298242 (+)
LOC120562880 NA coding upstream 481028 7004604 ~ 7029761 (+)
tsnare1 tsnare1,LOC101472715 coding upstream 705189 6636852 ~ 6805600 (+)
LOC120561876 NA coding upstream 1696147 5812877 ~ 5814642 (+)
LOC120562247 NA coding upstream 2153495 5355807 ~ 5357294 (+)
LOC120561797 NA coding downstream 143858 7665238 ~ 7707591 (+)
LOC120561799 NA coding downstream 210446 7731826 ~ 7741034 (+)
rbm42 rbm42 coding downstream 246379 7767759 ~ 7783482 (+)
LOC120563115 LOC104936139,LOC100707989,LOC101475232,LOC102313234 coding downstream 364317 7885697 ~ 7904575 (+)
gpd1l gpd1l,LOC103034694,LOC108434205,LOC107600618 coding downstream 508302 8029682 ~ 8046678 (+)
G71072 NA non-coding upstream 90892 7419697 ~ 7419897 (+)
G71054 NA non-coding upstream 134509 7374401 ~ 7376280 (+)
G71041 NA non-coding upstream 207675 7300359 ~ 7303114 (+)
G71039 NA non-coding upstream 211696 7298504 ~ 7299093 (+)
G71013 NA non-coding upstream 603019 6907561 ~ 6907770 (+)
LOC120562239 NA non-coding downstream 16248 7537628 ~ 7538242 (+)
G71090 NA non-coding downstream 21069 7542449 ~ 7559399 (+)
G71091 NA non-coding downstream 45727 7567107 ~ 7567414 (+)
LOC120561796 NA non-coding downstream 134783 7656163 ~ 7660085 (+)
G71150 NA non-coding downstream 221252 7742632 ~ 7744001 (+)
znrf2b znrf2 other upstream 10607 7456767 ~ 7500182 (+)
cdk14 cdk14 other upstream 218354 7039163 ~ 7292435 (+)
G70894 NA other upstream 1549935 5960455 ~ 5960854 (+)
si:ch211-198c19.1 NA other upstream 1915889 5591199 ~ 5594900 (+)
LOC120562244 zdhhc3,LOC103364625,LOC101488043,LOC107102987 other upstream 2043699 5336214 ~ 5467090 (+)
G71147 LOC103388722,LOC104941093,LOC103369890 other downstream 209642 7731022 ~ 7801380 (+)
G71309 NA other downstream 600221 8121601 ~ 8122239 (+)
ano10a ano10 other downstream 762000 8283380 ~ 8309744 (+)
G71470 rrp15,LOC106584165,LOC106605018 other downstream 1227563 8748943 ~ 8751443 (+)
LOC120561899 LOC104959271 other downstream 1238666 8760046 ~ 8776508 (+)

Expression


Co-expression Network