G71176


Basic Information

Item Value
gene id G71176
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 7871517 ~ 7875600 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU95205
AAACAAtcataaacattttattaaaacaaagttgACAGTTAATGTCAAAAACAAACTTCCAAGCATAAATTCTGCTTTACACTTTGCCAACACAAGAGCAAGTCAGTGAAAAAGTCACCATCTATATTTGTCTGTACACACAAGGTCAAGTTTACCTCCTCACCACTAAACAGATCAGCATCAAGGGTTCCTTACCTACAAAGTGTGGGTATTGTGCAATAAGTACACACAACATTAAGACAGTATATTTGACCATACATAAGTTCTGACAGATAACTTATATACTAAAATAACTAGCCTTCTGAGGTGTGGTATGTGGGTAATAGGGATCTCCCTACCAATATGGGATTGTGCTACCTGGAATCAGAAGCAGCCTGATAAGGCAGTAAACAGAAGAGCAAATACACgtcatgaaaaaaagaaaaagacattaAGTAAGAAAGGATGAGAAGCACAGATGAGcaataaaatactgaaatgaaaGTACTGACCAAACAAAAAACCTCACTGGAGCTAAAAATCAAACCATATAGTAGTAGTTCAAACTTTCATAACTGCATAATCATATCTGTTGAAAATACTCAGGGTAGAAGGTGGCAAATGAATTCATAAAATTCCCTCACAACTCACCTAAGGCTGGGGACACGCTACACAACCCTGGACCCCTGTTGTTTCACTCTTACAGTTGATACGCATCACTTGTGCATAACCGATGTGAAATAAGGTCGGTCCAACCAGATGTGCACCTTTACATATTATAAACCTTGTACTTCTAACATGATTTGCTCCAATCTGGCAATCCACTCAGATGACGACCTGTGGCTGAAATTGCCCCAAACGTCATGTAACGTGCTCCCAACCTTACCAGTGATAGATTAGCAGGATGCTTGGTCAGTTAAGTGTCAGGGGACTAGGAAACCCAGCCAAATTTGACGCCGATTGCTCGTGATGCTTTCATGGCATGATAGGCAGGCGGCGGTGTAGAGGAGGGCAAAGGACAACACAGAGTATAAAAAGTAGATGGTGGTGAAAATGGTAATCCGTTTCCCTGAGCCTCCGCCAATACCTCATTTCTTCTGTTTAGGTGGAGGTCtgaggagagaaggaaaaggGCACATTACTACACGTATATATGAAAAAGAGCAGGCACTATATGTGGAGAGCTGACTGCAGCAGTTTGGGAGGGTCTGGATGAATGGGTCAACCTGTCACCATAACTCAACTCTGGGAACATTAGTAGGAAGGGGGAAACATCATGGAGCTCTGGAGCAGCACCATGACATTTCTTCCTGTCTGTTTACTTATTCCAAATTCACCATATTAATGTGCAACTCTGTGCCTTTTAATTGTAATCCCACACAGGTCCCTATACTCACAACCTGGGTTACCTACACTGTAGAACTAATGTGGTGGATACTTCACAAACCCAGAGTAAGTCAAAGTTATTTGAAAGAGAACACAAAAGGTGAATGGTAAAATGATTACCTAAACTGTCTGTTGTAAACATCCACCCCAGTCTAGGTGTGCTCACAGTTTAACCCTCAAAGTCAGgagtcttcaatgttttttaagccaaggaccccttaacagagagacagagcagggaccccccaacatattgtataaaatgaagttgcatattaaactgggcctacaataacgtgtcgGTGGCCTAAAGTCTTTATACATactttcaaaaaactATTTGGTG
>TU95206
AAACAAtcataaacattttattaaaacaaagttgACAGTTAATGTCAAAAACAAACTTCCAAGCATAAATTCTGCTTTACACTTTGCCAACACAAGAGCAAGTCAGTGAAAAAGTCACCATCTATATTTGTCTGTACACACAAGGTCAAGTTTACCTCCTCACCACTAAACAGATCAGCATCAAGGGTTCCTTACCTACAAAGTGTGGGTATTGTGCAATAAGTACACACAACATTAAGACAGTATATTTGACCATACATAAGTTCTGACAGATAACTTATATACTAAAATAACTAGCCTTCTGAGGTGTGGTATGTGGGTAATAGGGATCTCCCTACCAATATGGGATTGTGCTACCTGGAATCAGAAGCAGCCTGATAAGGCAGTAAACAGAAGAGCAAATACACgtcatgaaaaaaagaaaaagacattaAGTAAGAAAGGATGAGAAGCACAGATGAGcaataaaatactgaaatgaaaGTACTGACCAAACAAAAAACCTCACTGGAGCTAAAAATCAAACCATATAGTAGTAGTTCAAACTTTCATAACTGCATAATCATATCTGTTGAAAATACTCAGGGTAGAAGGTGGCAAATGAATTCATAAAATTCCCTCACAACTCACCTAAGGCTGGGGACACGCTACACAACCCTGGACCCCTGTTGTTTCACTCTTACAGTTGATACGCATCACTTGTGCATAACCGATGTGAAATAAGGTCGGTCCAACCAGATGTGCACCTTTACATATTATAAACCTTGTACTTCTAACATGATTTGCTCCAATCTGGCAATCCACTCAGATGACGACCTGTGGCTGAAATTGCCCCAAACGTCATGTAACGTGCTCCCAACCTTACCAGTGATAGATTAGCAGGATGCTTGGTCAGTTAAGTGTCAGGGGACTAGGAAACCCAGCCAAATTTGACGCCGATTGCTCGTGATGCTTTCATGGCATGATAGGCAGGCGGCGGTGTAGAGGAGGGCAAAGGACAACACAGAGTATAAAAAGTAGATGGTGGTGAAAATGGTAATCCGTTTCCCTGAGCCTCCGCCAATACCTCATTTCTTCTGTTTAGGTGGAGATAACAAAGTGTCCTCCGTTTTTCAGGAAGTTGTGAGCGTTCAAAGCAACAATCCTCGTCTGGTCAGGCTGGGCAACATCAGCAAAAATCACATCCACCATGCCTAGAAAGGGACAAGGCGTTAATGTCCGCACACAAAGCATCCGTTTACACATTTATTAATGTTTGAGATGAGCCTGGCGAATGCATTATGCTTCTTCCAGTCCATTTTCAACAATCAGCAGATCCATCAAGCTACATGGCAATCATGTCAAATTATCAATAAGTTCAAGTGTGCATTATGTAGATCATTTGATAATCTTGTAGAGATCAGATGTTTGTTCAGGACAGAACCATGACCAATCTGCTAAGTCTCCTGCTGTGGATCAGAACTACCTACCAACCAGCATGCGGTATTTGTGCGGGTGGCGGGCATCTTCGATAATTGGAATGATGTTGGTGCGTTTCTTTGCCACATTGAGAAGGTCACGGCCCGATCGATGGGAAAACTCCACAGCGTAGACCAGCCCTTCCTGTAACACAGACACAGGTTTACTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95205 True 1711 lncRNA 0.41 2 7871517 7873393
TU95206 False 1629 lncRNA 0.42 2 7871517 7875600

Neighbor

gene id symbol gene type direction distance location
rbm42 rbm42 coding upstream 88035 7767759 ~ 7783482 (+)
LOC120561799 NA coding upstream 130483 7731826 ~ 7741034 (+)
LOC120561797 NA coding upstream 163926 7665238 ~ 7707591 (+)
fzd1 fzd1,LOC104958298,LOC104925482 coding upstream 573275 7295946 ~ 7298242 (+)
LOC120562880 NA coding upstream 841756 7004604 ~ 7029761 (+)
LOC120563115 LOC104936139,LOC100707989,LOC101475232,LOC102313234 coding downstream 10097 7885697 ~ 7904575 (+)
gpd1l gpd1l,LOC103034694,LOC108434205,LOC107600618 coding downstream 154082 8029682 ~ 8046678 (+)
tcaim tcaim coding downstream 172860 8048460 ~ 8059416 (+)
LOC120561723 NA coding downstream 208300 8083900 ~ 8089659 (+)
LOC120561722 NA coding downstream 216052 8091652 ~ 8096292 (+)
G71148 NA non-coding upstream 69502 7796341 ~ 7802015 (+)
G71150 NA non-coding upstream 127516 7742632 ~ 7744001 (+)
LOC120561796 NA non-coding upstream 211432 7656163 ~ 7660085 (+)
G71091 NA non-coding upstream 304103 7567107 ~ 7567414 (+)
G71090 NA non-coding upstream 312118 7542449 ~ 7559399 (+)
G71204 osbpl10 non-coding downstream 97262 7972862 ~ 7980906 (+)
G71200 NA non-coding downstream 171350 8046950 ~ 8047669 (+)
G71211 NA non-coding downstream 173435 8049035 ~ 8059805 (+)
G71201 NA non-coding downstream 184510 8060110 ~ 8060801 (+)
G71220 NA non-coding downstream 192455 8068055 ~ 8069124 (+)
G71147 LOC103388722,LOC104941093,LOC103369890 other upstream 70137 7731022 ~ 7801380 (+)
znrf2b znrf2 other upstream 371335 7456767 ~ 7500182 (+)
cdk14 cdk14 other upstream 579082 7039163 ~ 7292435 (+)
G70894 NA other upstream 1910663 5960455 ~ 5960854 (+)
si:ch211-198c19.1 NA other upstream 2276617 5591199 ~ 5594900 (+)
G71309 NA other downstream 246001 8121601 ~ 8122239 (+)
ano10a ano10 other downstream 407780 8283380 ~ 8309744 (+)
G71470 rrp15,LOC106584165,LOC106605018 other downstream 873343 8748943 ~ 8751443 (+)
LOC120561899 LOC104959271 other downstream 884446 8760046 ~ 8776508 (+)
trnay-gua_1 NA other downstream 934751 8810351 ~ 8810439 (+)

Expression


Co-expression Network