G71882


Basic Information

Item Value
gene id G71882
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 11483406 ~ 11483643 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU96053
acagactcacggactttagtgcgcgttctcgcgaaattcataagggcttagggttgtcccaatgtggaatttcaaagggcgtgagggtttgagtacacacttaccgagccctttccgtgagtctgcatcgatgcagacttcaccaaagggaattacccacagttcaaagcgttgtgacgttcACCGCGGAGACCatagggaaatccggaaattacgaaggtaaacaaTAGCACGACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96053 True 238 lncRNA 0.49 1 11483406 11483643

Neighbor

gene id symbol gene type direction distance location
LOC120561921 LOC104943362,LOC103369138 coding upstream 466824 11010980 ~ 11016582 (+)
macf1b LOC102795676,LOC102290681,LOC101484559,LOC100704065,LOC104943360 coding upstream 480936 10961890 ~ 11002470 (+)
rspo2 rspo2 coding upstream 754285 10662478 ~ 10729121 (+)
eif3ea eif3e,LOC101480544,LOC102302331,LOC100691937 coding upstream 826610 10621192 ~ 10656796 (+)
LOC120561655 tmem74,LOC103359617 coding upstream 964415 10516857 ~ 10518991 (+)
LOC120562012 LOC103388795,LOC103359769 coding downstream 115471 11599114 ~ 11616059 (+)
LOC120562594 znf516 coding downstream 237473 11721116 ~ 11768925 (+)
LOC120562168 zadh2,LOC102799231 coding downstream 487234 11970877 ~ 11975946 (+)
LOC120561949 zhx2,LOC104959811 coding downstream 943898 12427541 ~ 12455916 (+)
tbc1d31 tbc1d31 coding downstream 982306 12465949 ~ 12476564 (+)
G71873 NA non-coding upstream 46707 11436471 ~ 11436699 (+)
LOC120562313 NA non-coding upstream 173554 11236294 ~ 11309852 (+)
G71838 NA non-coding upstream 296048 11187122 ~ 11187358 (+)
G71835 NA non-coding upstream 320361 11162696 ~ 11163045 (+)
G71826 NA non-coding upstream 363198 11119919 ~ 11120208 (+)
G71921 NA non-coding downstream 222914 11706557 ~ 11772009 (+)
G71929 NA non-coding downstream 337997 11821640 ~ 11821934 (+)
G71952 NA non-coding downstream 728367 12212010 ~ 12215147 (+)
G71953 NA non-coding downstream 732620 12216263 ~ 12216560 (+)
G71959 NA non-coding downstream 789751 12273394 ~ 12275941 (+)
depdc1b depdc1b,LOC103388656,LOC101486657 other upstream 983 11467345 ~ 11482423 (+)
LOC120562569 LOC104943359,LOC103359623,LOC101482188,LOC107100615,LOC106961743 other upstream 522276 10785654 ~ 10961130 (+)
G71743 NA other upstream 661906 10820295 ~ 10821500 (+)
LOC120561920 LOC106676202,LOC102303534 other upstream 731557 10746008 ~ 10751849 (+)
G71610 NA other upstream 1275209 10207415 ~ 10208197 (+)
mbpb mbp,LOC104918400 other downstream 53541 11537184 ~ 11599226 (+)
G71896 LOC103388795 other downstream 115394 11599037 ~ 11616242 (+)
LOC120561922 NA other downstream 224738 11708381 ~ 11710258 (+)
LOC120563165 scx other downstream 1227959 12711602 ~ 12729226 (+)
LOC120562335 NA other downstream 1277174 12760817 ~ 12773439 (+)

Expression


Co-expression Network