mbpb (mbp,LOC104918400)


Basic Information

Item Value
gene id mbpb
gene name mbp,LOC104918400
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 11537184 ~ 11599226 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU96071
CACAGTCTTTTGTGATATGATAAGGGCATAGGCCATATAGATTTGAGTTTGTTGACAGACATAAAACAACGTTAGAgagctttttaattactttttttgactcTGTAATGAGTGATTTAAAACGTGGCAATAtatattaacaaaacaaaacaaaacatacttaagtaaaactacatattttaaaaactactatGAAGTCAAATTAggctatacaaaaaaaatgacagcaaTGCGAGTGTAATTcattactttccacctctgcatgCAGCTGCCAACGATGAACATAAAGCAGAGCTGTGCTATCCTGCAGGTGTGTGAGTCGTAGCCTACGTGAGATCTTATTTCAAAATCACGACTTTGTTTCGCGCGTGTATTTAACCCTCTCTACTATGAAGCACGAACTACTAAGCATGCACAGACGTGCACCAACGTGCTTTTTAGCCCATTTTTCTTGGCGGACTAAAAGCTTCATTCCGCCCCACCCCTTACAAACAACATCATCGCTGTACCTAAATCAGGAAGCACCGACACGTTttcttttctgttatttaaaacaattttttttttacggagACACTTTGGTGATTACAGCAACGGTGAACCATACAGGGGAAAAGGCGTTATTGTTGTTGACGTCCACCGTCGACTAGCCTACTGTCGAAAGAAGACTGACAGTTGGTTACATCCAGTACAAGGCTCAGCTGTggatgcatttgacacagactAACCGGAGAAGGTCTCTGTCAGCAGCATGGGCCAGCATCTAGGAAAGAGGGAGTCTCCCACAGTCAGCAAGGCTCCATCACCTGAACCTGTAGCAGAGCagacagcaacagcagcagcagcagtagcagcagaacCTGAATCACATGATGAAGTCTTTGG
>XM_039805415.1
CCCCACCCCTTACAAACAACATCATCGCTGTACCTAAATCAGGAAGCACCGACACGTTttcttttctgttatttaaaacaattttttttttacggagACACTTTGGTGATTACAGCAACGGTGAACCATACAGGGGAAAAGGCGTTATTGTTGTTGACGTCCACCGTCGACTAGCCTACTGTCGAAAGAAGACTGACAGTTGGTTACATCCAGTACAAGGCTCAGCTGTggatgcatttgacacagactAACCGGAGAAGGTCTCTGTCAGCAGCATGGGCCAGCATCTAGGAAAGAGGGAGTCTCCCACAGTCAGCAAGGCTCCATCACCTGAACCTGTAGCAGAGCagacagcaacagcagcagcagcagtagcagcagaacCTGAATCACATGATGAAGTCTTTGGCCTGGGTGAGGCAGATGCGAACCAGAACAATGGCTGCATCTCGGAGAAGCCGGCGGTGACTGACTCCACGGGCGCTGAGGGCCCCCACCAGCCCTGGCCCCACGCCAGCACAGCTGACCCTGacgccgccacgccacgcccccACCTGGTCCGCCTCTTCTCCCGAGATGCCCCGGGCCGAGAGGACAACACCTTCAAAGAGCGACCCTCCGAATCGGACGAGCTGCAGACCATCCAGGAACACAGCGGAGCGGCTTCAGAGTGCGGGTCGGAGAGCGCCGAACAGGACCTAGATTAGGATAGCTTCATTTttcccatccctccctctcgtttctcttttccctcttcTGTTTTTCGCTCTCTCATATATACGAGAGAGACAAGAGCCCCACATttgacaaa

Function

symbol description
mbp Enables calmodulin binding activity. Involved in several processes, including maintenance of blood-brain barrier; negative regulation of heterotypic cell-cell adhesion; and positive regulation of macromolecule metabolic process. Located in myelin sheath. Part of protein-containing complex. Implicated in multiple sclerosis.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96071 True 885 lncRNA 0.42 3 11537184 11570067
XM_039805415.1 False 811 mRNA 0.54 4 11537660 11599226

Neighbor

gene id symbol gene type direction distance location
LOC120561921 LOC104943362,LOC103369138 coding upstream 520602 11010980 ~ 11016582 (+)
macf1b LOC102795676,LOC102290681,LOC101484559,LOC100704065,LOC104943360 coding upstream 534714 10961890 ~ 11002470 (+)
rspo2 rspo2 coding upstream 808063 10662478 ~ 10729121 (+)
eif3ea eif3e,LOC101480544,LOC102302331,LOC100691937 coding upstream 880388 10621192 ~ 10656796 (+)
LOC120561655 tmem74,LOC103359617 coding upstream 1018193 10516857 ~ 10518991 (+)
LOC120562594 znf516 coding downstream 121890 11721116 ~ 11768925 (+)
LOC120562168 zadh2,LOC102799231 coding downstream 371651 11970877 ~ 11975946 (+)
LOC120561949 zhx2,LOC104959811 coding downstream 828315 12427541 ~ 12455916 (+)
tbc1d31 tbc1d31 coding downstream 866723 12465949 ~ 12476564 (+)
LOC120561925 NA coding downstream 879672 12478898 ~ 12484912 (+)
G71882 NA non-coding upstream 53541 11483406 ~ 11483643 (+)
G71873 NA non-coding upstream 100485 11436471 ~ 11436699 (+)
LOC120562313 NA non-coding upstream 227332 11236294 ~ 11309852 (+)
G71838 NA non-coding upstream 349826 11187122 ~ 11187358 (+)
G71835 NA non-coding upstream 374139 11162696 ~ 11163045 (+)
G71921 NA non-coding downstream 107331 11706557 ~ 11772009 (+)
G71929 NA non-coding downstream 222414 11821640 ~ 11821934 (+)
G71952 NA non-coding downstream 612784 12212010 ~ 12215147 (+)
G71953 NA non-coding downstream 617037 12216263 ~ 12216560 (+)
G71959 NA non-coding downstream 674168 12273394 ~ 12275941 (+)
depdc1b depdc1b,LOC103388656,LOC101486657 other upstream 54761 11467345 ~ 11482423 (+)
LOC120562569 LOC104943359,LOC103359623,LOC101482188,LOC107100615,LOC106961743 other upstream 576054 10785654 ~ 10961130 (+)
G71743 NA other upstream 715684 10820295 ~ 10821500 (+)
LOC120561920 LOC106676202,LOC102303534 other upstream 785335 10746008 ~ 10751849 (+)
G71610 NA other upstream 1328987 10207415 ~ 10208197 (+)
LOC120561922 NA other downstream 109155 11708381 ~ 11710258 (+)
LOC120563165 scx other downstream 1112376 12711602 ~ 12729226 (+)
LOC120562335 NA other downstream 1161591 12760817 ~ 12773439 (+)
G72204 ctnnb1,LOC103388302 other downstream 1525708 13124934 ~ 13125897 (+)
hint3 hint3 other downstream 1646442 13245668 ~ 13250110 (+)

Expression


Co-expression Network